RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-201ENST00000357235 RALBP1Q15311 655 aa10.85□□□□□ -0.67
CDC42SE1-201ENST00000357235 ANKRD30AQ9BXX3 1397 aa10.85□□□□□ -0.67
CDC42SE1-201ENST00000357235 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-201ENST00000357235 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
CDC42SE1-201ENST00000357235 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
CDC42SE1-201ENST00000357235 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
CDC42SE1-201ENST00000357235 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
CDC42SE1-201ENST00000357235 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-201ENST00000357235 HNRNPMP52272 730 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC42SE1-201ENST00000357235 GSE1Q14687 1217 aa10.83□□□□□ -0.68
CDC42SE1-201ENST00000357235 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 BRD4O60885 1362 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 CAMSAP2Q08AD1 1489 aa10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 BACH2Q9BYV9 841 aa10.82□□□□□ -0.68
CDC42SE1-201ENST00000357235 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-201ENST00000357235 PLB1Q6P1J6 1458 aa10.8□□□□□ -0.68
CDC42SE1-201ENST00000357235 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
CDC42SE1-201ENST00000357235 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
CDC42SE1-201ENST00000357235 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-201ENST00000357235 PANK3Q9H999 370 aa10.79□□□□□ -0.68
CDC42SE1-201ENST00000357235 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-201ENST00000357235 RGS3P49796 1198 aa10.77□□□□□ -0.68
CDC42SE1-201ENST00000357235 GPATCH8Q9UKJ3 1502 aaKnown RBP10.77□□□□□ -0.68
CDC42SE1-201ENST00000357235 MBD5Q9P267 1494 aa10.77□□□□□ -0.69
CDC42SE1-201ENST00000357235 PDE3BQ13370 1112 aa10.77□□□□□ -0.69
CDC42SE1-201ENST00000357235 KDM5CP41229 1560 aa10.77□□□□□ -0.69
CDC42SE1-201ENST00000357235 DISP1Q96F81 1524 aa10.76□□□□□ -0.69
CDC42SE1-201ENST00000357235 RALGAPBQ86X10 1494 aa10.75□□□□□ -0.69
CDC42SE1-201ENST00000357235 MS4A1P11836 297 aa10.75□□□□□ -0.69
CDC42SE1-201ENST00000357235 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE1-201ENST00000357235 ADAMTS12P58397 1594 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 KIF14Q15058 1648 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 JPH4Q96JJ6 628 aa10.74□□□□□ -0.69
CDC42SE1-201ENST00000357235 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 FRAT1Q92837 279 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 DDRGK1Q96HY6 314 aa10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 PER1O15534 1290 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 HSP90AA2PQ14568 343 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE1-201ENST00000357235 KIAA0556O60303 1618 aa10.72□□□□□ -0.69
CDC42SE1-201ENST00000357235 CCDC144AA2RUR9 1427 aa10.72□□□□□ -0.69
CDC42SE1-201ENST00000357235 TMF1P82094 1093 aa10.71□□□□□ -0.69
CDC42SE1-201ENST00000357235 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
CDC42SE1-201ENST00000357235 UHRF1BP1Q6BDS2 1440 aa10.71□□□□□ -0.69
CDC42SE1-201ENST00000357235 PARD3Q8TEW0 1356 aa10.71□□□□□ -0.69
CDC42SE1-201ENST00000357235 KNSTRNQ9Y448 316 aa10.71□□□□□ -0.69
CDC42SE1-201ENST00000357235 DISP3Q9P2K9 1392 aa10.71□□□□□ -0.7
CDC42SE1-201ENST00000357235 NFKBIBQ15653 356 aa10.71□□□□□ -0.7
CDC42SE1-201ENST00000357235 RRP9O43818 475 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-201ENST00000357235 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE1-201ENST00000357235 CYB5RLQ6IPT4 315 aa10.68□□□□□ -0.7
CDC42SE1-201ENST00000357235 TESK2Q96S53 571 aa10.68□□□□□ -0.7
CDC42SE1-201ENST00000357235 ADGRL2O95490 1459 aa10.68□□□□□ -0.7
CDC42SE1-201ENST00000357235 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
CDC42SE1-201ENST00000357235 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
CDC42SE1-201ENST00000357235 CHD1O14646 1710 aa10.67□□□□□ -0.7
CDC42SE1-201ENST00000357235 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
CDC42SE1-201ENST00000357235 HSP90AA1P07900 732 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-201ENST00000357235 CENPQQ7L2Z9 268 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-201ENST00000357235 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE1-201ENST00000357235 CANXP27824 592 aaKnown RBP10.66□□□□□ -0.7
CDC42SE1-201ENST00000357235 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
CDC42SE1-201ENST00000357235 PRAG1Q86YV5 1406 aa10.65□□□□□ -0.7
CDC42SE1-201ENST00000357235 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-201ENST00000357235 ARXQ96QS3 562 aa10.65□□□□□ -0.7
CDC42SE1-201ENST00000357235 ARHGEF12Q9NZN5 1544 aa10.65□□□□□ -0.7
CDC42SE1-201ENST00000357235 PPP2R1AP30153 589 aa10.65□□□□□ -0.71
CDC42SE1-201ENST00000357235 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.71
CDC42SE1-201ENST00000357235 NAP1L5Q96NT1 182 aaPredicted RBP10.65□□□□□ -0.71
CDC42SE1-201ENST00000357235 BCAR3O75815 825 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 ITSN2Q9NZM3 1697 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 ADGBQ8N7X0 1667 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 PLEKHH1Q9ULM0 1364 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 APAF1O14727 1248 aa10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-201ENST00000357235 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
CDC42SE1-201ENST00000357235 TNNT2P45379 298 aaPredicted RBP10.62□□□□□ -0.71
CDC42SE1-201ENST00000357235 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
CDC42SE1-201ENST00000357235 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
CDC42SE1-201ENST00000357235 SLKQ9H2G2 1235 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-201ENST00000357235 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE1-201ENST00000357235 ATP10BO94823 1461 aa10.61□□□□□ -0.71
CDC42SE1-201ENST00000357235 NUP160Q12769 1436 aa10.6□□□□□ -0.71
CDC42SE1-201ENST00000357235 RRAGDQ9NQL2 400 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-201ENST00000357235 AAMPQ13685 434 aa10.6□□□□□ -0.71
CDC42SE1-201ENST00000357235 BLMP54132 1417 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms