RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SLC4A1APQ9BWU0 796 aaKnown RBP8.3□□□□□ -1.08
TRIM38-201ENST00000357085 TEX14Q8IWB6 1497 aa8.3□□□□□ -1.08
TRIM38-201ENST00000357085 MRE11P49959 708 aa8.3□□□□□ -1.08
TRIM38-201ENST00000357085 HAP1P54257 671 aaPredicted RBP8.3□□□□□ -1.08
TRIM38-201ENST00000357085 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
TRIM38-201ENST00000357085 RUSC2Q8N2Y8 1516 aa8.3□□□□□ -1.08
TRIM38-201ENST00000357085 DHX29Q7Z478 1369 aaKnown RBP8.29□□□□□ -1.08
TRIM38-201ENST00000357085 NRDCO43847 1150 aa8.29□□□□□ -1.08
TRIM38-201ENST00000357085 DNTTIP2Q5QJE6 756 aaKnown RBP8.29□□□□□ -1.08
TRIM38-201ENST00000357085 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
TRIM38-201ENST00000357085 KIAA2012Q0VF49 1180 aa8.28□□□□□ -1.08
TRIM38-201ENST00000357085 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
TRIM38-201ENST00000357085 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
TRIM38-201ENST00000357085 RWDD1Q9H446 243 aaPredicted RBP8.28□□□□□ -1.08
TRIM38-201ENST00000357085 HMGN5P82970 282 aaKnown RBP8.28□□□□□ -1.08
TRIM38-201ENST00000357085 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
TRIM38-201ENST00000357085 PDCL3Q9H2J4 239 aa8.27□□□□□ -1.09
TRIM38-201ENST00000357085 SLC4A3P48751 1232 aa8.27□□□□□ -1.09
TRIM38-201ENST00000357085 EXOC6Q8TAG9 804 aa8.27□□□□□ -1.09
TRIM38-201ENST00000357085 CIZ1Q9ULV3 898 aaPredicted RBP8.26□□□□□ -1.09
TRIM38-201ENST00000357085 MCM5P33992 734 aa8.26□□□□□ -1.09
TRIM38-201ENST00000357085 TPM3P06753 285 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
TRIM38-201ENST00000357085 TCOF1Q13428 1488 aaKnown RBP8.25□□□□□ -1.09
TRIM38-201ENST00000357085 ABCA10Q8WWZ4 1543 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 CCDC141Q6ZP82 1450 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 PDE4CQ08493 712 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 RSPH4AQ5TD94 716 aa8.25□□□□□ -1.09
TRIM38-201ENST00000357085 FAM13BQ9NYF5 915 aa8.24□□□□□ -1.09
TRIM38-201ENST00000357085 TERF1P54274 439 aa8.24□□□□□ -1.09
TRIM38-201ENST00000357085 TMF1P82094 1093 aa8.24□□□□□ -1.09
TRIM38-201ENST00000357085 TSPYL1Q9H0U9 437 aa8.24□□□□□ -1.09
TRIM38-201ENST00000357085 DHX8Q14562 1220 aaKnown RBP8.24□□□□□ -1.09
TRIM38-201ENST00000357085 CALD1Q05682 793 aaKnown RBP8.23□□□□□ -1.09
TRIM38-201ENST00000357085 ARID3AQ99856 593 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 CLCN1P35523 988 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 FTSJ3Q8IY81 847 aaKnown RBP8.23□□□□□ -1.09
TRIM38-201ENST00000357085 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 CT47B1P0C2W7 299 aaPredicted RBP8.23□□□□□ -1.09
TRIM38-201ENST00000357085 ATAD2Q6PL18 1390 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 NAIPQ13075 1403 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 RALGAPBQ86X10 1494 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 HS1BP3Q53T59 392 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 DNMT1P26358 1616 aaKnown RBP8.23□□□□□ -1.09
TRIM38-201ENST00000357085 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
TRIM38-201ENST00000357085 HSP90AB1P08238 724 aaKnown RBP8.22□□□□□ -1.09
TRIM38-201ENST00000357085 CCDC173Q0VFZ6 552 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 UGGT2Q9NYU1 1516 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 TSPY4P0CV99 314 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 TSPY10P0CW01 314 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 IPO8O15397 1037 aaKnown RBP8.22□□□□□ -1.09
TRIM38-201ENST00000357085 ESPNB1AK53 854 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
TRIM38-201ENST00000357085 KLHL34Q8N239 644 aa8.21□□□□□ -1.09
TRIM38-201ENST00000357085 E9PSI1 815 aa8.21□□□□□ -1.1
TRIM38-201ENST00000357085 KIF7Q2M1P5 1343 aa8.21□□□□□ -1.1
TRIM38-201ENST00000357085 MPHOSPH9Q99550 1183 aa8.21□□□□□ -1.1
TRIM38-201ENST00000357085 IQGAP2Q13576 1575 aa8.21□□□□□ -1.1
TRIM38-201ENST00000357085 KIAA1211Q6ZU35 1233 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 SAMD9Q5K651 1589 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 PLEKHG5O94827 1062 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 SENP3-EIF4A1A0A087X0R7 540 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 NUP160Q12769 1436 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 CHMP5Q9NZZ3 219 aa8.2□□□□□ -1.1
TRIM38-201ENST00000357085 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
TRIM38-201ENST00000357085 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 CARMIL2Q6F5E8 1435 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 MCCP23508 829 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 CCDC39Q9UFE4 941 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 KIAA1107Q9UPP5 1409 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 RNF123Q5XPI4 1314 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 SNAPC4Q5SXM2 1469 aa8.19□□□□□ -1.1
TRIM38-201ENST00000357085 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
TRIM38-201ENST00000357085 CCDC66A2RUB6 948 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 ATP6V1DQ9Y5K8 247 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 PDS5BQ9NTI5 1447 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 POGKQ9P215 609 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 KANK1Q14678 1352 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 CAVIN1Q6NZI2 390 aaKnown RBP8.18□□□□□ -1.1
TRIM38-201ENST00000357085 CHIC2Q9UKJ5 165 aa8.18□□□□□ -1.1
TRIM38-201ENST00000357085 IGF1RP08069 1367 aa8.17□□□□□ -1.1
TRIM38-201ENST00000357085 LAMC1P11047 1609 aa8.17□□□□□ -1.1
TRIM38-201ENST00000357085 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
TRIM38-201ENST00000357085 CENPJQ9HC77 1338 aaPredicted RBP8.17□□□□□ -1.1
TRIM38-201ENST00000357085 CRBNQ96SW2 442 aa8.17□□□□□ -1.1
TRIM38-201ENST00000357085 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
TRIM38-201ENST00000357085 GRPEL1Q9HAV7 217 aa8.17□□□□□ -1.1
TRIM38-201ENST00000357085 ERCC6Q03468 1493 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 GRIN2BQ13224 1484 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 REREQ9P2R6 1566 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 FAM184AQ8NB25 1140 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 L3MBTL2Q969R5 705 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
TRIM38-201ENST00000357085 HTATSF1O43719 755 aaKnown RBP8.16□□□□□ -1.1
TRIM38-201ENST00000357085 BICRAQ9NZM4 1560 aa8.16□□□□□ -1.1
TRIM38-201ENST00000357085 KDM5DQ9BY66 1539 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms