RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
TCF4-202ENST00000356073 LTV1Q96GA3 475 aaPredicted RBP14.01□□□□□ -0.17
TCF4-202ENST00000356073 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
TCF4-202ENST00000356073 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
TCF4-202ENST00000356073 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
TCF4-202ENST00000356073 STK31Q9BXU1 1019 aa13.99□□□□□ -0.17
TCF4-202ENST00000356073 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
TCF4-202ENST00000356073 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
TCF4-202ENST00000356073 CHMP4AQ9BY43 222 aa13.98□□□□□ -0.17
TCF4-202ENST00000356073 EID1Q9Y6B2 187 aa13.98□□□□□ -0.17
TCF4-202ENST00000356073 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
TCF4-202ENST00000356073 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
TCF4-202ENST00000356073 HDGFL2Q7Z4V5 671 aaPredicted RBP13.97□□□□□ -0.17
TCF4-202ENST00000356073 IKQ13123 557 aaPredicted RBP13.97□□□□□ -0.17
TCF4-202ENST00000356073 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
TCF4-202ENST00000356073 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
TCF4-202ENST00000356073 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
TCF4-202ENST00000356073 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
TCF4-202ENST00000356073 CCDC70Q6NSX1 233 aa13.96□□□□□ -0.17
TCF4-202ENST00000356073 GGT6Q6P531 493 aa13.96□□□□□ -0.17
TCF4-202ENST00000356073 CCDC66A2RUB6 948 aa13.94□□□□□ -0.18
TCF4-202ENST00000356073 TPM1P09493 284 aa13.94□□□□□ -0.18
TCF4-202ENST00000356073 STK11IPQ8N1F8 1099 aa13.94□□□□□ -0.18
TCF4-202ENST00000356073 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
TCF4-202ENST00000356073 KANK1Q14678 1352 aa13.93□□□□□ -0.18
TCF4-202ENST00000356073 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
TCF4-202ENST00000356073 CCDC47Q96A33 483 aaKnown RBP13.93□□□□□ -0.18
TCF4-202ENST00000356073 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
TCF4-202ENST00000356073 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
TCF4-202ENST00000356073 AMPHP49418 695 aa13.91□□□□□ -0.18
TCF4-202ENST00000356073 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
TCF4-202ENST00000356073 NUTM2FA1L443 756 aa13.91□□□□□ -0.18
TCF4-202ENST00000356073 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
TCF4-202ENST00000356073 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
TCF4-202ENST00000356073 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
TCF4-202ENST00000356073 IPO7O95373 1038 aaKnown RBP13.9□□□□□ -0.18
TCF4-202ENST00000356073 HMMRO75330 724 aa13.9□□□□□ -0.18
TCF4-202ENST00000356073 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
TCF4-202ENST00000356073 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
TCF4-202ENST00000356073 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
TCF4-202ENST00000356073 H3BQV1 296 aa13.89□□□□□ -0.19
TCF4-202ENST00000356073 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
TCF4-202ENST00000356073 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
TCF4-202ENST00000356073 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
TCF4-202ENST00000356073 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
TCF4-202ENST00000356073 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
TCF4-202ENST00000356073 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
TCF4-202ENST00000356073 ZNF771Q7L3S4 317 aaPredicted RBP13.86□□□□□ -0.19
TCF4-202ENST00000356073 MYO18AQ92614 2054 aaKnown RBP13.86□□□□□ -0.19
TCF4-202ENST00000356073 EPS15P42566 896 aa13.86□□□□□ -0.19
TCF4-202ENST00000356073 B4GALNT3Q6L9W6 998 aa13.86□□□□□ -0.19
TCF4-202ENST00000356073 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
TCF4-202ENST00000356073 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
TCF4-202ENST00000356073 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 KIF16BQ96L93 1317 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 NEBLO76041 1014 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 TRIM29Q14134 588 aa13.85□□□□□ -0.19
TCF4-202ENST00000356073 FAM184AQ8NB25 1140 aa13.84□□□□□ -0.19
TCF4-202ENST00000356073 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
TCF4-202ENST00000356073 FYB1O15117 783 aa13.84□□□□□ -0.19
TCF4-202ENST00000356073 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.84□□□□□ -0.19
TCF4-202ENST00000356073 SKOR2Q2VWA4 1001 aaPredicted RBP13.84□□□□□ -0.19
TCF4-202ENST00000356073 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
TCF4-202ENST00000356073 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
TCF4-202ENST00000356073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
TCF4-202ENST00000356073 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
TCF4-202ENST00000356073 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
TCF4-202ENST00000356073 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
TCF4-202ENST00000356073 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
TCF4-202ENST00000356073 ACBD3Q9H3P7 528 aa13.81□□□□□ -0.2
TCF4-202ENST00000356073 SUPT16HQ9Y5B9 1047 aaKnown RBP13.81□□□□□ -0.2
TCF4-202ENST00000356073 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
TCF4-202ENST00000356073 AK9Q5TCS8 1911 aa13.8□□□□□ -0.2
TCF4-202ENST00000356073 OFD1O75665 1012 aa13.8□□□□□ -0.2
TCF4-202ENST00000356073 GOLGA4Q13439 2230 aaKnown RBP13.8□□□□□ -0.2
TCF4-202ENST00000356073 ZRSR2Q15696 482 aaKnown RBP13.8□□□□□ -0.2
TCF4-202ENST00000356073 RBM19Q9Y4C8 960 aaKnown RBP13.8□□□□□ -0.2
TCF4-202ENST00000356073 ERICH2A1L162 156 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
TCF4-202ENST00000356073 CBX1P83916 185 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCF4-202ENST00000356073 NEFHP12036 1026 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 TMF1P82094 1093 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
TCF4-202ENST00000356073 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
TCF4-202ENST00000356073 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
TCF4-202ENST00000356073 MPHOSPH10O00566 681 aaKnown RBP13.78□□□□□ -0.2
TCF4-202ENST00000356073 USP8P40818 1118 aa13.78□□□□□ -0.2
TCF4-202ENST00000356073 GZF1Q9H116 711 aaPredicted RBP13.78□□□□□ -0.2
TCF4-202ENST00000356073 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
TCF4-202ENST00000356073 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
TCF4-202ENST00000356073 CDR1P51861 262 aa13.78□□□□□ -0.2
TCF4-202ENST00000356073 CAGE1Q8TC20 777 aa13.77□□□□□ -0.2
TCF4-202ENST00000356073 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.2
TCF4-202ENST00000356073 DCTN1Q14203 1278 aa13.77□□□□□ -0.2
TCF4-202ENST00000356073 CA8P35219 290 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms