RNA–Protein interactions for RNA: ENST00000355951.2

TCAF1-201, Transcript of TRPM8 channel associated factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCAF1, Length 3,343 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-201ENST00000355951 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
TCAF1-201ENST00000355951 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
TCAF1-201ENST00000355951 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
TCAF1-201ENST00000355951 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
TCAF1-201ENST00000355951 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
TCAF1-201ENST00000355951 ARHGEF40Q8TER5 1519 aa12.69□□□□□ -0.38
TCAF1-201ENST00000355951 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
TCAF1-201ENST00000355951 HECW2Q9P2P5 1572 aa12.69□□□□□ -0.38
TCAF1-201ENST00000355951 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
TCAF1-201ENST00000355951 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
TCAF1-201ENST00000355951 MLH3Q9UHC1 1453 aa12.68□□□□□ -0.38
TCAF1-201ENST00000355951 FGD6Q6ZV73 1430 aa12.68□□□□□ -0.38
TCAF1-201ENST00000355951 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
TCAF1-201ENST00000355951 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
TCAF1-201ENST00000355951 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
TCAF1-201ENST00000355951 ADGBQ8N7X0 1667 aa12.67□□□□□ -0.38
TCAF1-201ENST00000355951 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
TCAF1-201ENST00000355951 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
TCAF1-201ENST00000355951 RTEL1-TNFRSF6BF6WH68 1400 aa12.65□□□□□ -0.38
TCAF1-201ENST00000355951 MSH5O43196 834 aa12.65□□□□□ -0.38
TCAF1-201ENST00000355951 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
TCAF1-201ENST00000355951 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
TCAF1-201ENST00000355951 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
TCAF1-201ENST00000355951 EFCAB2Q5VUJ9 269 aa12.64□□□□□ -0.39
TCAF1-201ENST00000355951 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
TCAF1-201ENST00000355951 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
TCAF1-201ENST00000355951 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
TCAF1-201ENST00000355951 SIGLEC1Q9BZZ2 1709 aa12.61□□□□□ -0.39
TCAF1-201ENST00000355951 AGLP35573 1532 aa12.61□□□□□ -0.39
TCAF1-201ENST00000355951 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
TCAF1-201ENST00000355951 ATP7AQ04656 1500 aa12.61□□□□□ -0.39
TCAF1-201ENST00000355951 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
TCAF1-201ENST00000355951 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
TCAF1-201ENST00000355951 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
TCAF1-201ENST00000355951 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
TCAF1-201ENST00000355951 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
TCAF1-201ENST00000355951 ZMYND15Q9H091 742 aa12.6□□□□□ -0.39
TCAF1-201ENST00000355951 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
TCAF1-201ENST00000355951 AAMPQ13685 434 aa12.59□□□□□ -0.39
TCAF1-201ENST00000355951 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
TCAF1-201ENST00000355951 FANCIQ9NVI1 1328 aa12.59□□□□□ -0.39
TCAF1-201ENST00000355951 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
TCAF1-201ENST00000355951 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
TCAF1-201ENST00000355951 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
TCAF1-201ENST00000355951 DAPK1P53355 1430 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
TCAF1-201ENST00000355951 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 ABCC5O15440 1437 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 GLIPR1L2Q4G1C9 344 aa12.57□□□□□ -0.4
TCAF1-201ENST00000355951 ANP32CO43423 234 aa12.56□□□□□ -0.4
TCAF1-201ENST00000355951 CFDP1Q9UEE9 299 aaPredicted RBP12.55□□□□□ -0.4
TCAF1-201ENST00000355951 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
TCAF1-201ENST00000355951 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
TCAF1-201ENST00000355951 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
TCAF1-201ENST00000355951 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
TCAF1-201ENST00000355951 ATP10AO60312 1499 aa12.53□□□□□ -0.4
TCAF1-201ENST00000355951 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
TCAF1-201ENST00000355951 MROH2AA6NES4 1674 aa12.52□□□□□ -0.41
TCAF1-201ENST00000355951 BRD2P25440 801 aaKnown RBP12.51□□□□□ -0.41
TCAF1-201ENST00000355951 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
TCAF1-201ENST00000355951 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
TCAF1-201ENST00000355951 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
TCAF1-201ENST00000355951 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
TCAF1-201ENST00000355951 UNC13BO14795 1591 aa12.5□□□□□ -0.41
TCAF1-201ENST00000355951 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
TCAF1-201ENST00000355951 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
TCAF1-201ENST00000355951 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
TCAF1-201ENST00000355951 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
TCAF1-201ENST00000355951 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
TCAF1-201ENST00000355951 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
TCAF1-201ENST00000355951 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
TCAF1-201ENST00000355951 KCNA4P22459 653 aa12.48□□□□□ -0.41
TCAF1-201ENST00000355951 NBR1Q14596 966 aa12.48□□□□□ -0.41
TCAF1-201ENST00000355951 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
TCAF1-201ENST00000355951 A2MP01023 1474 aa12.47□□□□□ -0.41
TCAF1-201ENST00000355951 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
TCAF1-201ENST00000355951 NAP1L5Q96NT1 182 aaPredicted RBP12.47□□□□□ -0.41
TCAF1-201ENST00000355951 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
TCAF1-201ENST00000355951 DHX29Q7Z478 1369 aaKnown RBP12.45□□□□□ -0.42
TCAF1-201ENST00000355951 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
TCAF1-201ENST00000355951 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
TCAF1-201ENST00000355951 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.42
TCAF1-201ENST00000355951 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
TCAF1-201ENST00000355951 AFAP1Q8N556 730 aa12.43□□□□□ -0.42
TCAF1-201ENST00000355951 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
TCAF1-201ENST00000355951 IQGAP3Q86VI3 1631 aa12.42□□□□□ -0.42
TCAF1-201ENST00000355951 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
TCAF1-201ENST00000355951 NAIPQ13075 1403 aa12.42□□□□□ -0.42
TCAF1-201ENST00000355951 HNRNPUQ00839 825 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCAF1-201ENST00000355951 ANKRD30AQ9BXX3 1397 aa12.41□□□□□ -0.42
TCAF1-201ENST00000355951 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
TCAF1-201ENST00000355951 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
TCAF1-201ENST00000355951 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
TCAF1-201ENST00000355951 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
TCAF1-201ENST00000355951 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
TCAF1-201ENST00000355951 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
TCAF1-201ENST00000355951 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
TCAF1-201ENST00000355951 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms