RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 PANK3Q9H999 370 aa18.54■□□□□ 0.56
EBF3-201ENST00000355311 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
EBF3-201ENST00000355311 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
EBF3-201ENST00000355311 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
EBF3-201ENST00000355311 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
EBF3-201ENST00000355311 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
EBF3-201ENST00000355311 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
EBF3-201ENST00000355311 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
EBF3-201ENST00000355311 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
EBF3-201ENST00000355311 NUTM2DQ5VT03 806 aaPredicted RBP18.47■□□□□ 0.55
EBF3-201ENST00000355311 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
EBF3-201ENST00000355311 NOP58Q9Y2X3 529 aaKnown RBP18.46■□□□□ 0.55
EBF3-201ENST00000355311 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
EBF3-201ENST00000355311 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
EBF3-201ENST00000355311 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
EBF3-201ENST00000355311 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
EBF3-201ENST00000355311 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
EBF3-201ENST00000355311 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
EBF3-201ENST00000355311 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
EBF3-201ENST00000355311 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
EBF3-201ENST00000355311 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
EBF3-201ENST00000355311 KIF3BO15066 747 aa18.4■□□□□ 0.54
EBF3-201ENST00000355311 ABCA8O94911 1581 aa18.39■□□□□ 0.54
EBF3-201ENST00000355311 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.54
EBF3-201ENST00000355311 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
EBF3-201ENST00000355311 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
EBF3-201ENST00000355311 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
EBF3-201ENST00000355311 TESK2Q96S53 571 aa18.38■□□□□ 0.53
EBF3-201ENST00000355311 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
EBF3-201ENST00000355311 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
EBF3-201ENST00000355311 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 KDM5CP41229 1560 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
EBF3-201ENST00000355311 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 FAM135AQ9P2D6 1515 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
EBF3-201ENST00000355311 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
EBF3-201ENST00000355311 SPAG9O60271 1321 aaKnown RBP18.34■□□□□ 0.53
EBF3-201ENST00000355311 TMF1P82094 1093 aa18.34■□□□□ 0.53
EBF3-201ENST00000355311 RALBP1Q15311 655 aa18.34■□□□□ 0.53
EBF3-201ENST00000355311 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
EBF3-201ENST00000355311 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
EBF3-201ENST00000355311 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.53
EBF3-201ENST00000355311 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.52
EBF3-201ENST00000355311 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
EBF3-201ENST00000355311 SMG6Q86US8 1419 aaKnown RBP18.33■□□□□ 0.52
EBF3-201ENST00000355311 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
EBF3-201ENST00000355311 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
EBF3-201ENST00000355311 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
EBF3-201ENST00000355311 ADGBQ8N7X0 1667 aa18.32■□□□□ 0.52
EBF3-201ENST00000355311 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
EBF3-201ENST00000355311 GGT6Q6P531 493 aa18.31■□□□□ 0.52
EBF3-201ENST00000355311 PRAG1Q86YV5 1406 aa18.31■□□□□ 0.52
EBF3-201ENST00000355311 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
EBF3-201ENST00000355311 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
EBF3-201ENST00000355311 A2MP01023 1474 aa18.29■□□□□ 0.52
EBF3-201ENST00000355311 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
EBF3-201ENST00000355311 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
EBF3-201ENST00000355311 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
EBF3-201ENST00000355311 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
EBF3-201ENST00000355311 UHRF1BP1Q6BDS2 1440 aa18.27■□□□□ 0.52
EBF3-201ENST00000355311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.26■□□□□ 0.51
EBF3-201ENST00000355311 CROCC2H7BZ55 1655 aa18.26■□□□□ 0.51
EBF3-201ENST00000355311 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
EBF3-201ENST00000355311 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
EBF3-201ENST00000355311 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
EBF3-201ENST00000355311 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
EBF3-201ENST00000355311 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
EBF3-201ENST00000355311 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
EBF3-201ENST00000355311 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
EBF3-201ENST00000355311 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
EBF3-201ENST00000355311 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
EBF3-201ENST00000355311 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
EBF3-201ENST00000355311 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
EBF3-201ENST00000355311 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
EBF3-201ENST00000355311 SLC4A3P48751 1232 aa18.21■□□□□ 0.51
EBF3-201ENST00000355311 UHRF1BP1LA0JNW5 1464 aa18.21■□□□□ 0.51
EBF3-201ENST00000355311 ANP32AP39687 249 aaKnown RBP18.21■□□□□ 0.51
EBF3-201ENST00000355311 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
EBF3-201ENST00000355311 APAF1O14727 1248 aa18.21■□□□□ 0.5
EBF3-201ENST00000355311 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
EBF3-201ENST00000355311 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
EBF3-201ENST00000355311 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
EBF3-201ENST00000355311 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
EBF3-201ENST00000355311 KDM5DQ9BY66 1539 aa18.19■□□□□ 0.5
EBF3-201ENST00000355311 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
EBF3-201ENST00000355311 RGS3P49796 1198 aa18.18■□□□□ 0.5
EBF3-201ENST00000355311 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
EBF3-201ENST00000355311 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
EBF3-201ENST00000355311 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
EBF3-201ENST00000355311 BCAR3O75815 825 aa18.15■□□□□ 0.5
EBF3-201ENST00000355311 SLC12A5Q9H2X9 1139 aa18.15■□□□□ 0.5
EBF3-201ENST00000355311 STK26Q9P289 416 aa18.15■□□□□ 0.5
EBF3-201ENST00000355311 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
EBF3-201ENST00000355311 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 MAGI2Q86UL8 1455 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
EBF3-201ENST00000355311 PDE4AP27815 886 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms