RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
SCN8A-202ENST00000355133 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
SCN8A-202ENST00000355133 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.24
SCN8A-202ENST00000355133 NLRP13Q86W25 1043 aa16.52■□□□□ 0.23
SCN8A-202ENST00000355133 GTF2E1P29083 439 aaPredicted RBP16.51■□□□□ 0.23
SCN8A-202ENST00000355133 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
SCN8A-202ENST00000355133 FRAT2O75474 233 aaPredicted RBP16.5■□□□□ 0.23
SCN8A-202ENST00000355133 PTMSP20962 102 aa16.5■□□□□ 0.23
SCN8A-202ENST00000355133 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
SCN8A-202ENST00000355133 RSPH4AQ5TD94 716 aa16.49■□□□□ 0.23
SCN8A-202ENST00000355133 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
SCN8A-202ENST00000355133 CCDC18Q5T9S5 1454 aa16.49■□□□□ 0.23
SCN8A-202ENST00000355133 RASSF8Q8NHQ8 419 aa16.48■□□□□ 0.23
SCN8A-202ENST00000355133 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
SCN8A-202ENST00000355133 PANK3Q9H999 370 aa16.48■□□□□ 0.23
SCN8A-202ENST00000355133 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
SCN8A-202ENST00000355133 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
SCN8A-202ENST00000355133 CREBRFQ8IUR6 639 aa16.46■□□□□ 0.23
SCN8A-202ENST00000355133 TPM4P67936 248 aa16.46■□□□□ 0.22
SCN8A-202ENST00000355133 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
SCN8A-202ENST00000355133 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
SCN8A-202ENST00000355133 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
SCN8A-202ENST00000355133 NOC3LQ8WTT2 800 aaKnown RBP16.45■□□□□ 0.22
SCN8A-202ENST00000355133 ARID3AQ99856 593 aa16.44■□□□□ 0.22
SCN8A-202ENST00000355133 PDE4CQ08493 712 aa16.44■□□□□ 0.22
SCN8A-202ENST00000355133 COG3Q96JB2 828 aa16.43■□□□□ 0.22
SCN8A-202ENST00000355133 CCDC144AA2RUR9 1427 aa16.43■□□□□ 0.22
SCN8A-202ENST00000355133 KIF15Q9NS87 1388 aa16.43■□□□□ 0.22
SCN8A-202ENST00000355133 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
SCN8A-202ENST00000355133 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
SCN8A-202ENST00000355133 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
SCN8A-202ENST00000355133 EVA1CP58658 441 aa16.42■□□□□ 0.22
SCN8A-202ENST00000355133 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
SCN8A-202ENST00000355133 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
SCN8A-202ENST00000355133 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
SCN8A-202ENST00000355133 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
SCN8A-202ENST00000355133 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
SCN8A-202ENST00000355133 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
SCN8A-202ENST00000355133 KIF16BQ96L93 1317 aa16.4■□□□□ 0.22
SCN8A-202ENST00000355133 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.22
SCN8A-202ENST00000355133 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
SCN8A-202ENST00000355133 MARCH6O60337 910 aa16.39■□□□□ 0.21
SCN8A-202ENST00000355133 CSPP1Q1MSJ5 1256 aa16.39■□□□□ 0.21
SCN8A-202ENST00000355133 PLIN1O60240 522 aa16.39■□□□□ 0.21
SCN8A-202ENST00000355133 ST18O60284 1047 aa16.39■□□□□ 0.21
SCN8A-202ENST00000355133 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.39■□□□□ 0.21
SCN8A-202ENST00000355133 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
SCN8A-202ENST00000355133 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SCN8A-202ENST00000355133 VGFO15240 615 aaPredicted RBP16.38■□□□□ 0.21
SCN8A-202ENST00000355133 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
SCN8A-202ENST00000355133 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
SCN8A-202ENST00000355133 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
SCN8A-202ENST00000355133 MSH5O43196 834 aa16.37■□□□□ 0.21
SCN8A-202ENST00000355133 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
SCN8A-202ENST00000355133 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
SCN8A-202ENST00000355133 TEFQ10587 303 aa16.37■□□□□ 0.21
SCN8A-202ENST00000355133 WIZO95785 1651 aa16.36■□□□□ 0.21
SCN8A-202ENST00000355133 NECTIN2Q92692 538 aa16.35■□□□□ 0.21
SCN8A-202ENST00000355133 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
SCN8A-202ENST00000355133 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
SCN8A-202ENST00000355133 PRM3Q9NNZ6 103 aa16.34■□□□□ 0.21
SCN8A-202ENST00000355133 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
SCN8A-202ENST00000355133 H3BQV1 296 aa16.34■□□□□ 0.21
SCN8A-202ENST00000355133 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
SCN8A-202ENST00000355133 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.21
SCN8A-202ENST00000355133 PTPRGP23470 1445 aa16.33■□□□□ 0.2
SCN8A-202ENST00000355133 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.2
SCN8A-202ENST00000355133 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.2
SCN8A-202ENST00000355133 KIF3AQ9Y496 699 aa16.33■□□□□ 0.2
SCN8A-202ENST00000355133 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
SCN8A-202ENST00000355133 E9PSI1 815 aa16.32■□□□□ 0.2
SCN8A-202ENST00000355133 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
SCN8A-202ENST00000355133 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
SCN8A-202ENST00000355133 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
SCN8A-202ENST00000355133 FAM184AQ8NB25 1140 aa16.31■□□□□ 0.2
SCN8A-202ENST00000355133 SYTL4Q96C24 671 aaPredicted RBP16.31■□□□□ 0.2
SCN8A-202ENST00000355133 C9orf78Q9NZ63 289 aaPredicted RBP16.3■□□□□ 0.2
SCN8A-202ENST00000355133 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
SCN8A-202ENST00000355133 APAF1O14727 1248 aa16.3■□□□□ 0.2
SCN8A-202ENST00000355133 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
SCN8A-202ENST00000355133 CRBNQ96SW2 442 aa16.3■□□□□ 0.2
SCN8A-202ENST00000355133 RAD21O60216 631 aa16.3■□□□□ 0.2
SCN8A-202ENST00000355133 USP47Q96K76 1375 aa16.29■□□□□ 0.2
SCN8A-202ENST00000355133 CENPQQ7L2Z9 268 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-202ENST00000355133 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-202ENST00000355133 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
SCN8A-202ENST00000355133 PSME1Q06323 249 aa16.29■□□□□ 0.2
SCN8A-202ENST00000355133 AKAP17AQ02040 695 aaKnown RBP16.29■□□□□ 0.2
SCN8A-202ENST00000355133 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
SCN8A-202ENST00000355133 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
SCN8A-202ENST00000355133 PHF14O94880 888 aa16.28■□□□□ 0.2
SCN8A-202ENST00000355133 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
SCN8A-202ENST00000355133 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
SCN8A-202ENST00000355133 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.19
SCN8A-202ENST00000355133 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.19
SCN8A-202ENST00000355133 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
SCN8A-202ENST00000355133 TPM3P06753 285 aa16.26■□□□□ 0.19
SCN8A-202ENST00000355133 CEP89Q96ST8 783 aa16.26■□□□□ 0.19
SCN8A-202ENST00000355133 RIPK4P57078 832 aa16.26■□□□□ 0.19
SCN8A-202ENST00000355133 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms