RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 ROCK2O75116 1388 aaKnown RBP29.97■■■□□ 2.39
LIMS2-202ENST00000355119 ABCC1P33527 1531 aa29.96■■■□□ 2.39
LIMS2-202ENST00000355119 DCAF11Q8TEB1 546 aa29.96■■■□□ 2.39
LIMS2-202ENST00000355119 MRS2Q9HD23 443 aa29.96■■■□□ 2.39
LIMS2-202ENST00000355119 DHX29Q7Z478 1369 aaKnown RBP29.95■■■□□ 2.39
LIMS2-202ENST00000355119 MAGI2Q86UL8 1455 aa29.95■■■□□ 2.38
LIMS2-202ENST00000355119 KDM2AQ9Y2K7 1162 aa29.93■■■□□ 2.38
LIMS2-202ENST00000355119 ARAP3Q8WWN8 1544 aa29.92■■■□□ 2.38
LIMS2-202ENST00000355119 BCANQ96GW7 911 aa29.91■■■□□ 2.38
LIMS2-202ENST00000355119 PLA2R1Q13018 1463 aa29.9■■■□□ 2.38
LIMS2-202ENST00000355119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.38
LIMS2-202ENST00000355119 PRAG1Q86YV5 1406 aa29.88■■■□□ 2.37
LIMS2-202ENST00000355119 TRPM1Q7Z4N2 1603 aa29.87■■■□□ 2.37
LIMS2-202ENST00000355119 ATP10AO60312 1499 aa29.87■■■□□ 2.37
LIMS2-202ENST00000355119 POLR3GLQ9BT43 218 aa29.86■■■□□ 2.37
LIMS2-202ENST00000355119 FAM9BQ8IZU0 186 aa29.85■■■□□ 2.37
LIMS2-202ENST00000355119 TRAPPC8Q9Y2L5 1435 aa29.84■■■□□ 2.37
LIMS2-202ENST00000355119 RTEL1-TNFRSF6BF6WH68 1400 aa29.82■■■□□ 2.36
LIMS2-202ENST00000355119 ST20-MTHFSA0A0A6YYL1 179 aa29.81■■■□□ 2.36
LIMS2-202ENST00000355119 A2MP01023 1474 aa29.81■■■□□ 2.36
LIMS2-202ENST00000355119 ZBED9Q6R2W3 1325 aa29.81■■■□□ 2.36
LIMS2-202ENST00000355119 LAMC1P11047 1609 aa29.8■■■□□ 2.36
LIMS2-202ENST00000355119 TSHZ2Q9NRE2 1034 aa29.78■■■□□ 2.36
LIMS2-202ENST00000355119 EIF2AK4Q9P2K8 1649 aaKnown RBP29.78■■■□□ 2.36
LIMS2-202ENST00000355119 WDR7Q9Y4E6 1490 aa29.78■■■□□ 2.36
LIMS2-202ENST00000355119 GPRASP1Q5JY77 1395 aa29.78■■■□□ 2.36
LIMS2-202ENST00000355119 SPAG9O60271 1321 aaKnown RBP29.76■■■□□ 2.35
LIMS2-202ENST00000355119 E9PCH4 1651 aa29.74■■■□□ 2.35
LIMS2-202ENST00000355119 ZFYVE16Q7Z3T8 1539 aa29.74■■■□□ 2.35
LIMS2-202ENST00000355119 RGL3Q3MIN7 710 aa29.74■■■□□ 2.35
LIMS2-202ENST00000355119 KTN1Q86UP2 1357 aaKnown RBP29.72■■■□□ 2.35
LIMS2-202ENST00000355119 ABCA9Q8IUA7 1624 aa29.71■■■□□ 2.35
LIMS2-202ENST00000355119 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
LIMS2-202ENST00000355119 ERICH6BQ5W0A0 696 aa29.68■■■□□ 2.34
LIMS2-202ENST00000355119 DEPDC5O75140 1603 aa29.66■■■□□ 2.34
LIMS2-202ENST00000355119 FANCAO15360 1455 aa29.65■■■□□ 2.34
LIMS2-202ENST00000355119 INO80Q9ULG1 1556 aaPredicted RBP29.64■■■□□ 2.34
LIMS2-202ENST00000355119 NBPF1Q3BBV0 1214 aa29.64■■■□□ 2.34
LIMS2-202ENST00000355119 AFAP1Q8N556 730 aa29.64■■■□□ 2.34
LIMS2-202ENST00000355119 RALBP1Q15311 655 aa29.63■■■□□ 2.33
LIMS2-202ENST00000355119 ATP7AQ04656 1500 aa29.62■■■□□ 2.33
LIMS2-202ENST00000355119 TRPM2O94759 1503 aa29.62■■■□□ 2.33
LIMS2-202ENST00000355119 COL17A1Q9UMD9 1497 aaPredicted RBP29.6■■■□□ 2.33
LIMS2-202ENST00000355119 CNGB1Q14028 1251 aaPredicted RBP29.6■■■□□ 2.33
LIMS2-202ENST00000355119 RNF17Q9BXT8 1623 aaKnown RBP29.6■■■□□ 2.33
LIMS2-202ENST00000355119 TMC1Q8TDI8 760 aa29.59■■■□□ 2.33
LIMS2-202ENST00000355119 TET3O43151 1660 aa29.59■■■□□ 2.33
LIMS2-202ENST00000355119 MYBBP1AQ9BQG0 1328 aaKnown RBP29.58■■■□□ 2.33
LIMS2-202ENST00000355119 BRD4O60885 1362 aaPredicted RBP29.58■■■□□ 2.33
LIMS2-202ENST00000355119 PNISRQ8TF01 805 aaKnown RBP29.57■■■□□ 2.32
LIMS2-202ENST00000355119 PTPRTO14522 1441 aa29.57■■■□□ 2.32
LIMS2-202ENST00000355119 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
LIMS2-202ENST00000355119 KANK1Q14678 1352 aa29.55■■■□□ 2.32
LIMS2-202ENST00000355119 ADGRL1O94910 1474 aa29.55■■■□□ 2.32
LIMS2-202ENST00000355119 CEP152O94986 1710 aa29.55■■■□□ 2.32
LIMS2-202ENST00000355119 SMG6Q86US8 1419 aaKnown RBP29.55■■■□□ 2.32
LIMS2-202ENST00000355119 VWDEQ8N2E2 1590 aa29.55■■■□□ 2.32
LIMS2-202ENST00000355119 ASXL2Q76L83 1435 aa29.54■■■□□ 2.32
LIMS2-202ENST00000355119 STAC3Q96MF2 364 aa29.54■■■□□ 2.32
LIMS2-202ENST00000355119 TESK2Q96S53 571 aa29.53■■■□□ 2.32
LIMS2-202ENST00000355119 SCAPERQ9BY12 1400 aa29.53■■■□□ 2.32
LIMS2-202ENST00000355119 MADDQ8WXG6 1647 aa29.52■■■□□ 2.32
LIMS2-202ENST00000355119 IRX6P78412 446 aaPredicted RBP29.52■■■□□ 2.32
LIMS2-202ENST00000355119 LRPPRCP42704 1394 aaKnown RBP29.5■■■□□ 2.31
LIMS2-202ENST00000355119 CLTCL1P53675 1640 aa29.49■■■□□ 2.31
LIMS2-202ENST00000355119 PARD3Q8TEW0 1356 aa29.48■■■□□ 2.31
LIMS2-202ENST00000355119 DISP3Q9P2K9 1392 aa29.48■■■□□ 2.31
LIMS2-202ENST00000355119 WASHC2CQ9Y4E1 1318 aa29.48■■■□□ 2.31
LIMS2-202ENST00000355119 TMF1P82094 1093 aa29.47■■■□□ 2.31
LIMS2-202ENST00000355119 PPP4R2Q9NY27 417 aa29.47■■■□□ 2.31
LIMS2-202ENST00000355119 NEURL4Q96JN8 1562 aa29.46■■■□□ 2.31
LIMS2-202ENST00000355119 NUDCQ9Y266 331 aa29.44■■■□□ 2.3
LIMS2-202ENST00000355119 IQGAP1P46940 1657 aa29.44■■■□□ 2.3
LIMS2-202ENST00000355119 PER1O15534 1290 aaPredicted RBP29.44■■■□□ 2.3
LIMS2-202ENST00000355119 MYT1LQ9UL68 1186 aa29.43■■■□□ 2.3
LIMS2-202ENST00000355119 KIF3BO15066 747 aa29.42■■■□□ 2.3
LIMS2-202ENST00000355119 NLRP13Q86W25 1043 aa29.42■■■□□ 2.3
LIMS2-202ENST00000355119 MROH1Q8NDA8 1641 aa29.42■■■□□ 2.3
LIMS2-202ENST00000355119 NPM1P06748 294 aaKnown RBP eCLIP29.38■■■□□ 2.29
LIMS2-202ENST00000355119 KIDINS220Q9ULH0 1771 aa29.37■■■□□ 2.29
LIMS2-202ENST00000355119 CFAP74Q9C0B2 1584 aa29.37■■■□□ 2.29
LIMS2-202ENST00000355119 ZNF518AQ6AHZ1 1483 aa29.37■■■□□ 2.29
LIMS2-202ENST00000355119 SCAF11Q99590 1463 aaKnown RBP29.36■■■□□ 2.29
LIMS2-202ENST00000355119 KIAA1210Q9ULL0 1709 aa29.36■■■□□ 2.29
LIMS2-202ENST00000355119 OSCARQ8IYS5 282 aa29.35■■■□□ 2.29
LIMS2-202ENST00000355119 PANK3Q9H999 370 aa29.34■■■□□ 2.29
LIMS2-202ENST00000355119 EFCAB6Q5THR3 1501 aa29.33■■■□□ 2.29
LIMS2-202ENST00000355119 LMTK2Q8IWU2 1503 aa29.32■■■□□ 2.28
LIMS2-202ENST00000355119 RNF123Q5XPI4 1314 aa29.32■■■□□ 2.28
LIMS2-202ENST00000355119 MYT1Q01538 1121 aa29.32■■■□□ 2.28
LIMS2-202ENST00000355119 CDCA8Q53HL2 280 aa29.3■■■□□ 2.28
LIMS2-202ENST00000355119 MYOM2P54296 1465 aa29.29■■■□□ 2.28
LIMS2-202ENST00000355119 INSRP06213 1382 aa29.29■■■□□ 2.28
LIMS2-202ENST00000355119 RBM19Q9Y4C8 960 aaKnown RBP29.28■■■□□ 2.28
LIMS2-202ENST00000355119 EIF3AQ14152 1382 aaKnown RBP29.27■■■□□ 2.28
LIMS2-202ENST00000355119 ZMYM4Q5VZL5 1548 aa29.27■■■□□ 2.28
LIMS2-202ENST00000355119 KIF1BO60333 1816 aa29.27■■■□□ 2.28
LIMS2-202ENST00000355119 CD109Q6YHK3 1445 aa29.26■■■□□ 2.27
LIMS2-202ENST00000355119 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
LIMS2-202ENST00000355119 MAP3K4Q9Y6R4 1608 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms