RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 KANK1Q14678 1352 aa5.13□□□□□ -1.59
RNF38-203ENST00000353739 TRPM1Q7Z4N2 1603 aa5.12□□□□□ -1.59
RNF38-203ENST00000353739 USP47Q96K76 1375 aa5.12□□□□□ -1.59
RNF38-203ENST00000353739 INO80Q9ULG1 1556 aaPredicted RBP5.12□□□□□ -1.59
RNF38-203ENST00000353739 TET3O43151 1660 aa5.12□□□□□ -1.59
RNF38-203ENST00000353739 WASHC2AQ641Q2 1341 aa5.12□□□□□ -1.59
RNF38-203ENST00000353739 ZFYVE16Q7Z3T8 1539 aa5.12□□□□□ -1.59
RNF38-203ENST00000353739 TRPM2O94759 1503 aa5.11□□□□□ -1.59
RNF38-203ENST00000353739 CEP152O94986 1710 aa5.11□□□□□ -1.59
RNF38-203ENST00000353739 RNF17Q9BXT8 1623 aaKnown RBP5.11□□□□□ -1.59
RNF38-203ENST00000353739 HNRNPMP52272 730 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNF38-203ENST00000353739 E9PCH4 1651 aa5.11□□□□□ -1.59
RNF38-203ENST00000353739 ATP7AQ04656 1500 aa5.1□□□□□ -1.59
RNF38-203ENST00000353739 PRDM15P57071 1507 aaPredicted RBP5.1□□□□□ -1.59
RNF38-203ENST00000353739 KIAA1210Q9ULL0 1709 aa5.1□□□□□ -1.59
RNF38-203ENST00000353739 ERCC6L2Q5T890 1561 aa5.1□□□□□ -1.59
RNF38-203ENST00000353739 SUPT16HQ9Y5B9 1047 aaKnown RBP5.1□□□□□ -1.59
RNF38-203ENST00000353739 SPHKAPQ2M3C7 1700 aa5.1□□□□□ -1.59
RNF38-203ENST00000353739 PRAG1Q86YV5 1406 aa5.1□□□□□ -1.59
RNF38-203ENST00000353739 GPRASP1Q5JY77 1395 aa5.09□□□□□ -1.59
RNF38-203ENST00000353739 ZMYM4Q5VZL5 1548 aa5.09□□□□□ -1.59
RNF38-203ENST00000353739 KIF7Q2M1P5 1343 aa5.09□□□□□ -1.59
RNF38-203ENST00000353739 BCORL1Q5H9F3 1711 aa5.09□□□□□ -1.59
RNF38-203ENST00000353739 INSRP06213 1382 aa5.09□□□□□ -1.59
RNF38-203ENST00000353739 EIF3AQ14152 1382 aaKnown RBP5.09□□□□□ -1.59
RNF38-203ENST00000353739 RALBP1Q15311 655 aa5.09□□□□□ -1.6
RNF38-203ENST00000353739 FOXD1Q16676 465 aa5.09□□□□□ -1.6
RNF38-203ENST00000353739 CARD11Q9BXL7 1154 aa5.09□□□□□ -1.6
RNF38-203ENST00000353739 NBPF8Q3BBV2 869 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 FANCAO15360 1455 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 LMTK2Q8IWU2 1503 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 VWDEQ8N2E2 1590 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 SPAG9O60271 1321 aaKnown RBP5.08□□□□□ -1.6
RNF38-203ENST00000353739 WASHC2CQ9Y4E1 1318 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 PRKRIP1Q9H875 184 aaPredicted RBP5.08□□□□□ -1.6
RNF38-203ENST00000353739 ZNF518AQ6AHZ1 1483 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 SCAPERQ9BY12 1400 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 CDCA8Q53HL2 280 aa5.08□□□□□ -1.6
RNF38-203ENST00000353739 ZBED9Q6R2W3 1325 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 ADGRL1O94910 1474 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 NPM1P06748 294 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNF38-203ENST00000353739 PTPRTO14522 1441 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 MADDQ8WXG6 1647 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 BRD4O60885 1362 aaPredicted RBP5.07□□□□□ -1.6
RNF38-203ENST00000353739 ZC3H13Q5T200 1668 aaKnown RBP5.07□□□□□ -1.6
RNF38-203ENST00000353739 A2MP01023 1474 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 MYOM2P54296 1465 aa5.07□□□□□ -1.6
RNF38-203ENST00000353739 COL17A1Q9UMD9 1497 aaPredicted RBP5.07□□□□□ -1.6
RNF38-203ENST00000353739 HIRIP3Q9BW71 556 aaPredicted RBP5.07□□□□□ -1.6
RNF38-203ENST00000353739 IQGAP1P46940 1657 aa5.06□□□□□ -1.6
RNF38-203ENST00000353739 HNRNPUQ00839 825 aaKnown RBP eCLIP5.06□□□□□ -1.6
RNF38-203ENST00000353739 MRS2Q9HD23 443 aa5.06□□□□□ -1.6
RNF38-203ENST00000353739 HECW2Q9P2P5 1572 aa5.06□□□□□ -1.6
RNF38-203ENST00000353739 NEO1Q92859 1461 aa5.06□□□□□ -1.6
RNF38-203ENST00000353739 SYNMO15061 1565 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 MYBBP1AQ9BQG0 1328 aaKnown RBP5.05□□□□□ -1.6
RNF38-203ENST00000353739 ASXL2Q76L83 1435 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 DCAF11Q8TEB1 546 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 DHX29Q7Z478 1369 aaKnown RBP5.05□□□□□ -1.6
RNF38-203ENST00000353739 TRAPPC8Q9Y2L5 1435 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 KIF1BO60333 1816 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 ZNF326Q5BKZ1 582 aaKnown RBP5.05□□□□□ -1.6
RNF38-203ENST00000353739 EFCAB6Q5THR3 1501 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 KCNH8Q96L42 1107 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 TMF1P82094 1093 aa5.05□□□□□ -1.6
RNF38-203ENST00000353739 SMG6Q86US8 1419 aaKnown RBP5.04□□□□□ -1.6
RNF38-203ENST00000353739 SCAF11Q99590 1463 aaKnown RBP5.04□□□□□ -1.6
RNF38-203ENST00000353739 CLTCL1P53675 1640 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 FKBP8Q14318 412 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 MLH3Q9UHC1 1453 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 SETBP1Q9Y6X0 1596 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 PLA2R1Q13018 1463 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 KDM5AP29375 1690 aaKnown RBP5.04□□□□□ -1.6
RNF38-203ENST00000353739 POGZQ7Z3K3 1410 aa5.04□□□□□ -1.6
RNF38-203ENST00000353739 IFT172Q9UG01 1749 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 GLI2P10070 1586 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 MYO3AQ8NEV4 1616 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 MAP3K4Q9Y6R4 1608 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.03□□□□□ -1.6
RNF38-203ENST00000353739 OSCARQ8IYS5 282 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 MROH1Q8NDA8 1641 aa5.03□□□□□ -1.6
RNF38-203ENST00000353739 DAXXQ9UER7 740 aaPredicted RBP5.02□□□□□ -1.61
RNF38-203ENST00000353739 KIDINS220Q9ULH0 1771 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 PDE3BQ13370 1112 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 ADGRB3O60242 1522 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 RPGRIP1LQ68CZ1 1315 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 TMC1Q8TDI8 760 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 KDM2AQ9Y2K7 1162 aa5.02□□□□□ -1.61
RNF38-203ENST00000353739 PARD3Q8TEW0 1356 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 CD109Q6YHK3 1445 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 C11orf95C9JLR9 678 aaPredicted RBP5.01□□□□□ -1.61
RNF38-203ENST00000353739 NLRP13Q86W25 1043 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 PPP4R2Q9NY27 417 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 PPRC1Q5VV67 1664 aaKnown RBP5.01□□□□□ -1.61
RNF38-203ENST00000353739 CAMSAP1Q5T5Y3 1602 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 NRXN1Q9ULB1 1477 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 NPC1L1Q9UHC9 1359 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 ST20-MTHFSA0A0A6YYL1 179 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 MYT1LQ9UL68 1186 aa5.01□□□□□ -1.61
RNF38-203ENST00000353739 LRPPRCP42704 1394 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms