RNA–Protein interactions for RNA: ENST00000350669.5

LDHB-201, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHB, Length 1,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-201ENST00000350669 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
LDHB-201ENST00000350669 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
LDHB-201ENST00000350669 CPS1P31327 1500 aa13.85□□□□□ -0.19
LDHB-201ENST00000350669 SHANK2Q9UPX8 1470 aa13.84□□□□□ -0.19
LDHB-201ENST00000350669 SUPT6HQ7KZ85 1726 aaKnown RBP13.84□□□□□ -0.19
LDHB-201ENST00000350669 CLTCQ00610 1675 aaKnown RBP13.84□□□□□ -0.19
LDHB-201ENST00000350669 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
LDHB-201ENST00000350669 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
LDHB-201ENST00000350669 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.2
LDHB-201ENST00000350669 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
LDHB-201ENST00000350669 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
LDHB-201ENST00000350669 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
LDHB-201ENST00000350669 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
LDHB-201ENST00000350669 NEURL4Q96JN8 1562 aa13.8□□□□□ -0.2
LDHB-201ENST00000350669 A2ML1A8K2U0 1454 aa13.8□□□□□ -0.2
LDHB-201ENST00000350669 GGT6Q6P531 493 aa13.8□□□□□ -0.2
LDHB-201ENST00000350669 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
LDHB-201ENST00000350669 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
LDHB-201ENST00000350669 SPAG9O60271 1321 aaKnown RBP13.79□□□□□ -0.2
LDHB-201ENST00000350669 DNMT1P26358 1616 aaKnown RBP13.79□□□□□ -0.2
LDHB-201ENST00000350669 VWDEQ8N2E2 1590 aa13.77□□□□□ -0.2
LDHB-201ENST00000350669 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.21
LDHB-201ENST00000350669 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
LDHB-201ENST00000350669 A2MP01023 1474 aa13.75□□□□□ -0.21
LDHB-201ENST00000350669 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
LDHB-201ENST00000350669 POLR1AO95602 1720 aaPredicted RBP13.74□□□□□ -0.21
LDHB-201ENST00000350669 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
LDHB-201ENST00000350669 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
LDHB-201ENST00000350669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
LDHB-201ENST00000350669 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
LDHB-201ENST00000350669 TNRQ92752 1358 aa13.72□□□□□ -0.21
LDHB-201ENST00000350669 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
LDHB-201ENST00000350669 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
LDHB-201ENST00000350669 NPHP4O75161 1426 aaPredicted RBP13.71□□□□□ -0.22
LDHB-201ENST00000350669 CDC42BPAQ5VT25 1732 aa13.71□□□□□ -0.22
LDHB-201ENST00000350669 INO80Q9ULG1 1556 aaPredicted RBP13.7□□□□□ -0.22
LDHB-201ENST00000350669 LRRC7Q96NW7 1537 aa13.7□□□□□ -0.22
LDHB-201ENST00000350669 RNF17Q9BXT8 1623 aaKnown RBP13.7□□□□□ -0.22
LDHB-201ENST00000350669 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
LDHB-201ENST00000350669 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
LDHB-201ENST00000350669 GPATCH8Q9UKJ3 1502 aaKnown RBP13.65□□□□□ -0.22
LDHB-201ENST00000350669 MED14O60244 1454 aa13.65□□□□□ -0.22
LDHB-201ENST00000350669 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
LDHB-201ENST00000350669 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 PZPP20742 1482 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 SYNMO15061 1565 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
LDHB-201ENST00000350669 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
LDHB-201ENST00000350669 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
LDHB-201ENST00000350669 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
LDHB-201ENST00000350669 CASKIN1Q8WXD9 1431 aa13.61□□□□□ -0.23
LDHB-201ENST00000350669 MIA2Q96PC5 1412 aa13.61□□□□□ -0.23
LDHB-201ENST00000350669 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
LDHB-201ENST00000350669 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
LDHB-201ENST00000350669 KDM5DQ9BY66 1539 aa13.6□□□□□ -0.23
LDHB-201ENST00000350669 ADGBQ8N7X0 1667 aa13.6□□□□□ -0.23
LDHB-201ENST00000350669 KIF3BO15066 747 aa13.6□□□□□ -0.23
LDHB-201ENST00000350669 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
LDHB-201ENST00000350669 ZNF644Q9H582 1327 aaPredicted RBP13.58□□□□□ -0.23
LDHB-201ENST00000350669 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.23
LDHB-201ENST00000350669 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
LDHB-201ENST00000350669 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
LDHB-201ENST00000350669 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
LDHB-201ENST00000350669 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
LDHB-201ENST00000350669 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
LDHB-201ENST00000350669 SRCAPQ6ZRS2 3230 aa13.55□□□□□ -0.24
LDHB-201ENST00000350669 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
LDHB-201ENST00000350669 MBD5Q9P267 1494 aa13.52□□□□□ -0.24
LDHB-201ENST00000350669 TRIM52Q96A61 297 aa13.52□□□□□ -0.25
LDHB-201ENST00000350669 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
LDHB-201ENST00000350669 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
LDHB-201ENST00000350669 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
LDHB-201ENST00000350669 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
LDHB-201ENST00000350669 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
LDHB-201ENST00000350669 TMEM94Q12767 1356 aa13.49□□□□□ -0.25
LDHB-201ENST00000350669 LTKP29376 864 aa13.49□□□□□ -0.25
LDHB-201ENST00000350669 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
LDHB-201ENST00000350669 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
LDHB-201ENST00000350669 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
LDHB-201ENST00000350669 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
LDHB-201ENST00000350669 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
LDHB-201ENST00000350669 ABCC3O15438 1527 aa13.45□□□□□ -0.26
LDHB-201ENST00000350669 JCADQ9P266 1359 aa13.45□□□□□ -0.26
LDHB-201ENST00000350669 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
LDHB-201ENST00000350669 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
LDHB-201ENST00000350669 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
LDHB-201ENST00000350669 LRP6O75581 1613 aa13.44□□□□□ -0.26
LDHB-201ENST00000350669 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
LDHB-201ENST00000350669 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
LDHB-201ENST00000350669 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
LDHB-201ENST00000350669 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
LDHB-201ENST00000350669 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
LDHB-201ENST00000350669 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
LDHB-201ENST00000350669 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
LDHB-201ENST00000350669 SLIT1O75093 1534 aa13.41□□□□□ -0.26
LDHB-201ENST00000350669 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
LDHB-201ENST00000350669 PHLPP1O60346 1717 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms