RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
MRPL55-204ENST00000348259 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
MRPL55-204ENST00000348259 MED1Q15648 1581 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-204ENST00000348259 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
MRPL55-204ENST00000348259 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-204ENST00000348259 DEPDC5O75140 1603 aa15.62■□□□□ 0.09
MRPL55-204ENST00000348259 GGT6Q6P531 493 aa15.62■□□□□ 0.09
MRPL55-204ENST00000348259 KDM5DQ9BY66 1539 aa15.62■□□□□ 0.09
MRPL55-204ENST00000348259 SHANK2Q9UPX8 1470 aa15.61■□□□□ 0.09
MRPL55-204ENST00000348259 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
MRPL55-204ENST00000348259 MED14O60244 1454 aa15.6■□□□□ 0.09
MRPL55-204ENST00000348259 STRCP1A6NGW2 1772 aa15.59■□□□□ 0.09
MRPL55-204ENST00000348259 TNRQ92752 1358 aa15.59■□□□□ 0.09
MRPL55-204ENST00000348259 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
MRPL55-204ENST00000348259 ARHGEF5Q12774 1597 aa15.58■□□□□ 0.08
MRPL55-204ENST00000348259 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
MRPL55-204ENST00000348259 FBXO31Q5XUX0 539 aaPredicted RBP15.56■□□□□ 0.08
MRPL55-204ENST00000348259 CAMSAP2Q08AD1 1489 aa15.56■□□□□ 0.08
MRPL55-204ENST00000348259 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
MRPL55-204ENST00000348259 HSPA1LP34931 641 aa15.55■□□□□ 0.08
MRPL55-204ENST00000348259 IQGAP1P46940 1657 aa15.54■□□□□ 0.08
MRPL55-204ENST00000348259 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
MRPL55-204ENST00000348259 ZC3H13Q5T200 1668 aaKnown RBP15.54■□□□□ 0.08
MRPL55-204ENST00000348259 MROH1Q8NDA8 1641 aa15.54■□□□□ 0.08
MRPL55-204ENST00000348259 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
MRPL55-204ENST00000348259 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
MRPL55-204ENST00000348259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.52■□□□□ 0.08
MRPL55-204ENST00000348259 SYNMO15061 1565 aa15.52■□□□□ 0.07
MRPL55-204ENST00000348259 MAST1Q9Y2H9 1570 aa15.52■□□□□ 0.07
MRPL55-204ENST00000348259 ABCC3O15438 1527 aa15.51■□□□□ 0.07
MRPL55-204ENST00000348259 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-204ENST00000348259 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
MRPL55-204ENST00000348259 KIF3BO15066 747 aa15.5■□□□□ 0.07
MRPL55-204ENST00000348259 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
MRPL55-204ENST00000348259 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
MRPL55-204ENST00000348259 XIRP1Q702N8 1843 aaKnown RBP15.48■□□□□ 0.07
MRPL55-204ENST00000348259 TOM1O60784 492 aa15.48■□□□□ 0.07
MRPL55-204ENST00000348259 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
MRPL55-204ENST00000348259 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
MRPL55-204ENST00000348259 ERVK-7P63135 1459 aa15.46■□□□□ 0.07
MRPL55-204ENST00000348259 THEMISQ8N1K5 641 aaPredicted RBP15.46■□□□□ 0.07
MRPL55-204ENST00000348259 CEP152O94986 1710 aa15.46■□□□□ 0.06
MRPL55-204ENST00000348259 WASHC2CQ9Y4E1 1318 aa15.45■□□□□ 0.06
MRPL55-204ENST00000348259 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
MRPL55-204ENST00000348259 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
MRPL55-204ENST00000348259 LOC105371045A0A1W2PR82 267 aa15.43■□□□□ 0.06
MRPL55-204ENST00000348259 SLIT1O75093 1534 aa15.43■□□□□ 0.06
MRPL55-204ENST00000348259 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
MRPL55-204ENST00000348259 CFAP65Q6ZU64 1925 aaKnown RBP15.4■□□□□ 0.06
MRPL55-204ENST00000348259 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
MRPL55-204ENST00000348259 LRRC9Q6ZRR7 1453 aa15.4■□□□□ 0.06
MRPL55-204ENST00000348259 SCAF11Q99590 1463 aaKnown RBP15.39■□□□□ 0.05
MRPL55-204ENST00000348259 ARHGAP31Q2M1Z3 1444 aa15.38■□□□□ 0.05
MRPL55-204ENST00000348259 KDM5AP29375 1690 aaKnown RBP15.38■□□□□ 0.05
MRPL55-204ENST00000348259 CROCC2H7BZ55 1655 aa15.37■□□□□ 0.05
MRPL55-204ENST00000348259 MAP3K1Q13233 1512 aa15.36■□□□□ 0.05
MRPL55-204ENST00000348259 DUOX2Q9NRD8 1548 aa15.36■□□□□ 0.05
MRPL55-204ENST00000348259 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-204ENST00000348259 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
MRPL55-204ENST00000348259 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
MRPL55-204ENST00000348259 LTKP29376 864 aa15.34■□□□□ 0.05
MRPL55-204ENST00000348259 PIK3C2BO00750 1634 aa15.34■□□□□ 0.05
MRPL55-204ENST00000348259 VPS8Q8N3P4 1428 aa15.33■□□□□ 0.04
MRPL55-204ENST00000348259 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
MRPL55-204ENST00000348259 TET3O43151 1660 aa15.31■□□□□ 0.04
MRPL55-204ENST00000348259 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
MRPL55-204ENST00000348259 ERBINQ96RT1 1412 aa15.3■□□□□ 0.04
MRPL55-204ENST00000348259 LMTK2Q8IWU2 1503 aa15.29■□□□□ 0.04
MRPL55-204ENST00000348259 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
MRPL55-204ENST00000348259 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
MRPL55-204ENST00000348259 ABCC5O15440 1437 aa15.27■□□□□ 0.04
MRPL55-204ENST00000348259 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.04
MRPL55-204ENST00000348259 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
MRPL55-204ENST00000348259 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
MRPL55-204ENST00000348259 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
MRPL55-204ENST00000348259 TXNDC2Q86VQ3 553 aa15.25■□□□□ 0.03
MRPL55-204ENST00000348259 EFCAB6Q5THR3 1501 aa15.25■□□□□ 0.03
MRPL55-204ENST00000348259 NOS1P29475 1434 aa15.24■□□□□ 0.03
MRPL55-204ENST00000348259 PTPN23Q9H3S7 1636 aa15.24■□□□□ 0.03
MRPL55-204ENST00000348259 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
MRPL55-204ENST00000348259 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
MRPL55-204ENST00000348259 ADGRB3O60242 1522 aa15.22■□□□□ 0.03
MRPL55-204ENST00000348259 DAPK1P53355 1430 aa15.21■□□□□ 0.03
MRPL55-204ENST00000348259 CHD2O14647 1828 aaKnown RBP15.2■□□□□ 0.02
MRPL55-204ENST00000348259 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
MRPL55-204ENST00000348259 KCNA6P17658 529 aa15.19■□□□□ 0.02
MRPL55-204ENST00000348259 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
MRPL55-204ENST00000348259 IDI1Q13907 227 aa15.18■□□□□ 0.02
MRPL55-204ENST00000348259 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
MRPL55-204ENST00000348259 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
MRPL55-204ENST00000348259 SETD1AO15047 1707 aaKnown RBP15.17■□□□□ 0.02
MRPL55-204ENST00000348259 COL16A1Q07092 1604 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-204ENST00000348259 ZFYVE9O95405 1425 aa15.17■□□□□ 0.02
MRPL55-204ENST00000348259 ADGRL2O95490 1459 aa15.16■□□□□ 0.02
MRPL55-204ENST00000348259 FGD6Q6ZV73 1430 aa15.16■□□□□ 0.02
MRPL55-204ENST00000348259 PHLPP1O60346 1717 aa15.15■□□□□ 0.02
MRPL55-204ENST00000348259 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
MRPL55-204ENST00000348259 RPRD2Q5VT52 1461 aaKnown RBP15.14■□□□□ 0.01
MRPL55-204ENST00000348259 TMEM131LA2VDJ0 1609 aa15.14■□□□□ 0.01
MRPL55-204ENST00000348259 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms