RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PKD2Q13563 968 aa26.98■■□□□ 1.91
PTN-201ENST00000348225 FOXD1Q16676 465 aa26.98■■□□□ 1.91
PTN-201ENST00000348225 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
PTN-201ENST00000348225 DEPDC5O75140 1603 aa26.95■■□□□ 1.91
PTN-201ENST00000348225 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
PTN-201ENST00000348225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.92■■□□□ 1.9
PTN-201ENST00000348225 A2MP01023 1474 aa26.92■■□□□ 1.9
PTN-201ENST00000348225 RAPGEF3O95398 923 aa26.9■■□□□ 1.9
PTN-201ENST00000348225 ABCA6Q8N139 1617 aa26.9■■□□□ 1.9
PTN-201ENST00000348225 FRMPD1Q5SYB0 1578 aa26.89■■□□□ 1.89
PTN-201ENST00000348225 ZMYM4Q5VZL5 1548 aa26.87■■□□□ 1.89
PTN-201ENST00000348225 PPP1R15AO75807 674 aaPredicted RBP26.87■■□□□ 1.89
PTN-201ENST00000348225 PRDM15P57071 1507 aaPredicted RBP26.86■■□□□ 1.89
PTN-201ENST00000348225 KANK1Q14678 1352 aa26.85■■□□□ 1.89
PTN-201ENST00000348225 ZNF316A6NFI3 1004 aaPredicted RBP26.85■■□□□ 1.89
PTN-201ENST00000348225 DIP2CQ9Y2E4 1556 aa26.84■■□□□ 1.89
PTN-201ENST00000348225 KIF3BO15066 747 aa26.83■■□□□ 1.89
PTN-201ENST00000348225 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.89
PTN-201ENST00000348225 RNF17Q9BXT8 1623 aaKnown RBP26.83■■□□□ 1.89
PTN-201ENST00000348225 VWDEQ8N2E2 1590 aa26.82■■□□□ 1.88
PTN-201ENST00000348225 MROH1Q8NDA8 1641 aa26.8■■□□□ 1.88
PTN-201ENST00000348225 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
PTN-201ENST00000348225 TET3O43151 1660 aa26.8■■□□□ 1.88
PTN-201ENST00000348225 ATP10AO60312 1499 aa26.74■■□□□ 1.87
PTN-201ENST00000348225 E9PCH4 1651 aa26.74■■□□□ 1.87
PTN-201ENST00000348225 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
PTN-201ENST00000348225 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
PTN-201ENST00000348225 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
PTN-201ENST00000348225 LMTK2Q8IWU2 1503 aa26.71■■□□□ 1.87
PTN-201ENST00000348225 PLA2R1Q13018 1463 aa26.69■■□□□ 1.86
PTN-201ENST00000348225 REREQ9P2R6 1566 aa26.68■■□□□ 1.86
PTN-201ENST00000348225 EFCAB6Q5THR3 1501 aa26.67■■□□□ 1.86
PTN-201ENST00000348225 CEP152O94986 1710 aa26.67■■□□□ 1.86
PTN-201ENST00000348225 SPHKAPQ2M3C7 1700 aa26.67■■□□□ 1.86
PTN-201ENST00000348225 TRPM2O94759 1503 aa26.65■■□□□ 1.86
PTN-201ENST00000348225 COL17A1Q9UMD9 1497 aaPredicted RBP26.63■■□□□ 1.85
PTN-201ENST00000348225 GGT6Q6P531 493 aa26.62■■□□□ 1.85
PTN-201ENST00000348225 PTPRTO14522 1441 aa26.62■■□□□ 1.85
PTN-201ENST00000348225 ARHGEF40Q8TER5 1519 aa26.61■■□□□ 1.85
PTN-201ENST00000348225 ZC3H13Q5T200 1668 aaKnown RBP26.61■■□□□ 1.85
PTN-201ENST00000348225 ABCC3O15438 1527 aa26.6■■□□□ 1.85
PTN-201ENST00000348225 AGLP35573 1532 aa26.58■■□□□ 1.85
PTN-201ENST00000348225 WASHC2CQ9Y4E1 1318 aa26.56■■□□□ 1.84
PTN-201ENST00000348225 CAMSAP1Q5T5Y3 1602 aa26.55■■□□□ 1.84
PTN-201ENST00000348225 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
PTN-201ENST00000348225 DIEXFQ68CQ4 756 aaKnown RBP26.54■■□□□ 1.84
PTN-201ENST00000348225 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
PTN-201ENST00000348225 CLTCL1P53675 1640 aa26.53■■□□□ 1.84
PTN-201ENST00000348225 NBPF8Q3BBV2 869 aa26.5■■□□□ 1.83
PTN-201ENST00000348225 NPATQ14207 1427 aa26.49■■□□□ 1.83
PTN-201ENST00000348225 NEURL4Q96JN8 1562 aa26.47■■□□□ 1.83
PTN-201ENST00000348225 ARHGAP31Q2M1Z3 1444 aa26.47■■□□□ 1.83
PTN-201ENST00000348225 SPATA31E1Q6ZUB1 1445 aa26.47■■□□□ 1.83
PTN-201ENST00000348225 DCAF11Q8TEB1 546 aa26.47■■□□□ 1.83
PTN-201ENST00000348225 CNTLNQ9NXG0 1405 aa26.45■■□□□ 1.83
PTN-201ENST00000348225 PPP6R1Q9UPN7 881 aa26.45■■□□□ 1.82
PTN-201ENST00000348225 RGL3Q3MIN7 710 aa26.43■■□□□ 1.82
PTN-201ENST00000348225 KIF1BO60333 1816 aa26.43■■□□□ 1.82
PTN-201ENST00000348225 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
PTN-201ENST00000348225 SIGLEC1Q9BZZ2 1709 aa26.43■■□□□ 1.82
PTN-201ENST00000348225 ZNF326Q5BKZ1 582 aaKnown RBP26.43■■□□□ 1.82
PTN-201ENST00000348225 KDM2AQ9Y2K7 1162 aa26.41■■□□□ 1.82
PTN-201ENST00000348225 EIF4G2P78344 907 aaKnown RBP eCLIP26.4■■□□□ 1.82
PTN-201ENST00000348225 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.82
PTN-201ENST00000348225 UGGT1Q9NYU2 1555 aa26.38■■□□□ 1.81
PTN-201ENST00000348225 NOS1P29475 1434 aa26.38■■□□□ 1.81
PTN-201ENST00000348225 CFAP65Q6ZU64 1925 aaKnown RBP26.37■■□□□ 1.81
PTN-201ENST00000348225 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
PTN-201ENST00000348225 HSPA5P11021 654 aaKnown RBP26.35■■□□□ 1.81
PTN-201ENST00000348225 CLTCQ00610 1675 aaKnown RBP26.34■■□□□ 1.81
PTN-201ENST00000348225 TRPM1Q7Z4N2 1603 aa26.34■■□□□ 1.81
PTN-201ENST00000348225 PREX1Q8TCU6 1659 aa26.33■■□□□ 1.81
PTN-201ENST00000348225 ADGRB3O60242 1522 aa26.32■■□□□ 1.8
PTN-201ENST00000348225 PIK3C2BO00750 1634 aa26.32■■□□□ 1.8
PTN-201ENST00000348225 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
PTN-201ENST00000348225 SYNMO15061 1565 aa26.32■■□□□ 1.8
PTN-201ENST00000348225 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
PTN-201ENST00000348225 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
PTN-201ENST00000348225 MLECQ14165 292 aa26.28■■□□□ 1.8
PTN-201ENST00000348225 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
PTN-201ENST00000348225 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
PTN-201ENST00000348225 LAMC1P11047 1609 aa26.27■■□□□ 1.8
PTN-201ENST00000348225 ARID4BQ4LE39 1312 aaPredicted RBP26.27■■□□□ 1.8
PTN-201ENST00000348225 USP47Q96K76 1375 aa26.26■■□□□ 1.8
PTN-201ENST00000348225 CARD11Q9BXL7 1154 aa26.26■■□□□ 1.79
PTN-201ENST00000348225 MYOM2P54296 1465 aa26.26■■□□□ 1.79
PTN-201ENST00000348225 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
PTN-201ENST00000348225 ERVK-7P63135 1459 aa26.25■■□□□ 1.79
PTN-201ENST00000348225 SLC52A1Q9NWF4 448 aa26.24■■□□□ 1.79
PTN-201ENST00000348225 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
PTN-201ENST00000348225 CHGAP10645 457 aaKnown RBP26.21■■□□□ 1.79
PTN-201ENST00000348225 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
PTN-201ENST00000348225 KIAA1210Q9ULL0 1709 aa26.2■■□□□ 1.78
PTN-201ENST00000348225 RPGRIP1LQ68CZ1 1315 aa26.19■■□□□ 1.78
PTN-201ENST00000348225 PPLO60437 1756 aa26.19■■□□□ 1.78
PTN-201ENST00000348225 POLR1AO95602 1720 aaPredicted RBP26.18■■□□□ 1.78
PTN-201ENST00000348225 IDI1Q13907 227 aa26.15■■□□□ 1.78
PTN-201ENST00000348225 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.78
PTN-201ENST00000348225 FBXO31Q5XUX0 539 aaPredicted RBP26.14■■□□□ 1.78
PTN-201ENST00000348225 ZMYM3Q14202 1370 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms