RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 RRP1P56182 461 aaKnown RBP19.44■□□□□ 0.7
SMTN-202ENST00000347557 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
SMTN-202ENST00000347557 KDM5CP41229 1560 aa19.42■□□□□ 0.7
SMTN-202ENST00000347557 NLRP13Q86W25 1043 aa19.41■□□□□ 0.7
SMTN-202ENST00000347557 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
SMTN-202ENST00000347557 RNF123Q5XPI4 1314 aa19.41■□□□□ 0.7
SMTN-202ENST00000347557 IPO9Q96P70 1041 aaKnown RBP19.4■□□□□ 0.7
SMTN-202ENST00000347557 ADGRL2O95490 1459 aa19.4■□□□□ 0.7
SMTN-202ENST00000347557 RALGAPBQ86X10 1494 aa19.4■□□□□ 0.7
SMTN-202ENST00000347557 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
SMTN-202ENST00000347557 ITSN2Q9NZM3 1697 aa19.4■□□□□ 0.7
SMTN-202ENST00000347557 BRD4O60885 1362 aaPredicted RBP19.4■□□□□ 0.7
SMTN-202ENST00000347557 SKAP1Q86WV1 359 aa19.4■□□□□ 0.7
SMTN-202ENST00000347557 CEP170Q5SW79 1584 aa19.39■□□□□ 0.7
SMTN-202ENST00000347557 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
SMTN-202ENST00000347557 ATP10BO94823 1461 aa19.39■□□□□ 0.69
SMTN-202ENST00000347557 PANK3Q9H999 370 aa19.38■□□□□ 0.69
SMTN-202ENST00000347557 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
SMTN-202ENST00000347557 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
SMTN-202ENST00000347557 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
SMTN-202ENST00000347557 ADGBQ8N7X0 1667 aa19.37■□□□□ 0.69
SMTN-202ENST00000347557 UHRF1BP1Q6BDS2 1440 aa19.36■□□□□ 0.69
SMTN-202ENST00000347557 POLR1AO95602 1720 aaPredicted RBP19.36■□□□□ 0.69
SMTN-202ENST00000347557 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
SMTN-202ENST00000347557 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.69
SMTN-202ENST00000347557 PTPRGP23470 1445 aa19.32■□□□□ 0.68
SMTN-202ENST00000347557 PDE4AP27815 886 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 DISP3Q9P2K9 1392 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 PER1O15534 1290 aaPredicted RBP19.29■□□□□ 0.68
SMTN-202ENST00000347557 CRBNQ96SW2 442 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 TMF1P82094 1093 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 MYT1LQ9UL68 1186 aa19.29■□□□□ 0.68
SMTN-202ENST00000347557 CROCC2H7BZ55 1655 aa19.27■□□□□ 0.68
SMTN-202ENST00000347557 CDC42BPAQ5VT25 1732 aa19.26■□□□□ 0.67
SMTN-202ENST00000347557 ARHGEF12Q9NZN5 1544 aa19.26■□□□□ 0.67
SMTN-202ENST00000347557 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
SMTN-202ENST00000347557 PDE3BQ13370 1112 aa19.25■□□□□ 0.67
SMTN-202ENST00000347557 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
SMTN-202ENST00000347557 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
SMTN-202ENST00000347557 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
SMTN-202ENST00000347557 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
SMTN-202ENST00000347557 TESK2Q96S53 571 aa19.24■□□□□ 0.67
SMTN-202ENST00000347557 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMTN-202ENST00000347557 C20orf194Q5TEA3 1177 aa19.24■□□□□ 0.67
SMTN-202ENST00000347557 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
SMTN-202ENST00000347557 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
SMTN-202ENST00000347557 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
SMTN-202ENST00000347557 NUP160Q12769 1436 aa19.23■□□□□ 0.67
SMTN-202ENST00000347557 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
SMTN-202ENST00000347557 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
SMTN-202ENST00000347557 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
SMTN-202ENST00000347557 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
SMTN-202ENST00000347557 CCDC146Q8IYE0 955 aa19.19■□□□□ 0.66
SMTN-202ENST00000347557 ABCA8O94911 1581 aa19.19■□□□□ 0.66
SMTN-202ENST00000347557 ERBINQ96RT1 1412 aa19.19■□□□□ 0.66
SMTN-202ENST00000347557 NEFMP07197 916 aa19.18■□□□□ 0.66
SMTN-202ENST00000347557 BACH2Q9BYV9 841 aa19.18■□□□□ 0.66
SMTN-202ENST00000347557 A2MP01023 1474 aa19.18■□□□□ 0.66
SMTN-202ENST00000347557 SYCP2Q9BX26 1530 aa19.17■□□□□ 0.66
SMTN-202ENST00000347557 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
SMTN-202ENST00000347557 SLC4A3P48751 1232 aa19.16■□□□□ 0.66
SMTN-202ENST00000347557 KDM5DQ9BY66 1539 aa19.16■□□□□ 0.66
SMTN-202ENST00000347557 SAMD9LQ8IVG5 1584 aa19.14■□□□□ 0.65
SMTN-202ENST00000347557 PPP2R1AP30153 589 aa19.13■□□□□ 0.65
SMTN-202ENST00000347557 RGS3P49796 1198 aa19.13■□□□□ 0.65
SMTN-202ENST00000347557 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.12■□□□□ 0.65
SMTN-202ENST00000347557 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
SMTN-202ENST00000347557 COL17A1Q9UMD9 1497 aaPredicted RBP19.11■□□□□ 0.65
SMTN-202ENST00000347557 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
SMTN-202ENST00000347557 PKNOX2Q96KN3 472 aa19.1■□□□□ 0.65
SMTN-202ENST00000347557 MS4A1P11836 297 aa19.09■□□□□ 0.65
SMTN-202ENST00000347557 WASHC2CQ9Y4E1 1318 aa19.09■□□□□ 0.65
SMTN-202ENST00000347557 PLEKHG5O94827 1062 aa19.08■□□□□ 0.65
SMTN-202ENST00000347557 GOLGA2Q08379 1002 aa19.08■□□□□ 0.65
SMTN-202ENST00000347557 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.64
SMTN-202ENST00000347557 RTN4Q9NQC3 1192 aaKnown RBP19.08■□□□□ 0.64
SMTN-202ENST00000347557 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.64
SMTN-202ENST00000347557 EFCAB2Q5VUJ9 269 aa19.07■□□□□ 0.64
SMTN-202ENST00000347557 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
SMTN-202ENST00000347557 PLEKHH1Q9ULM0 1364 aa19.06■□□□□ 0.64
SMTN-202ENST00000347557 APAF1O14727 1248 aa19.06■□□□□ 0.64
SMTN-202ENST00000347557 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
SMTN-202ENST00000347557 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
SMTN-202ENST00000347557 DUSP27Q5VZP5 1158 aa19.05■□□□□ 0.64
SMTN-202ENST00000347557 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
SMTN-202ENST00000347557 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
SMTN-202ENST00000347557 E9PCH4 1651 aa19.04■□□□□ 0.64
SMTN-202ENST00000347557 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
SMTN-202ENST00000347557 AMER1Q5JTC6 1135 aaPredicted RBP19.03■□□□□ 0.64
SMTN-202ENST00000347557 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
SMTN-202ENST00000347557 BLMP54132 1417 aaPredicted RBP19.02■□□□□ 0.64
SMTN-202ENST00000347557 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.64
SMTN-202ENST00000347557 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.64
SMTN-202ENST00000347557 CDCA8Q53HL2 280 aa19.02■□□□□ 0.63
SMTN-202ENST00000347557 MAGI2Q86UL8 1455 aa19.01■□□□□ 0.63
SMTN-202ENST00000347557 BCAR3O75815 825 aa19.01■□□□□ 0.63
SMTN-202ENST00000347557 SPINK5Q9NQ38 1064 aaPredicted RBP19.01■□□□□ 0.63
SMTN-202ENST00000347557 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
SMTN-202ENST00000347557 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms