RNA–Protein interactions for RNA: ENST00000344850.8

GTDC1-202, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-202ENST00000344850 GTPBP6O43824 516 aaPredicted RBP7.06□□□□□ -1.28
GTDC1-202ENST00000344850 HRCP23327 699 aa7.06□□□□□ -1.28
GTDC1-202ENST00000344850 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.06□□□□□ -1.28
GTDC1-202ENST00000344850 P3H3Q8IVL6 736 aa7.05□□□□□ -1.28
GTDC1-202ENST00000344850 TRAPPC8Q9Y2L5 1435 aa7.05□□□□□ -1.28
GTDC1-202ENST00000344850 NKX1-1Q15270 411 aaPredicted RBP7.05□□□□□ -1.28
GTDC1-202ENST00000344850 MYO5CQ9NQX4 1742 aa7.04□□□□□ -1.28
GTDC1-202ENST00000344850 ZNF518AQ6AHZ1 1483 aa7.04□□□□□ -1.28
GTDC1-202ENST00000344850 DIP2CQ9Y2E4 1556 aa7.04□□□□□ -1.28
GTDC1-202ENST00000344850 MED1Q15648 1581 aaPredicted RBP7.03□□□□□ -1.28
GTDC1-202ENST00000344850 TCOF1Q13428 1488 aaKnown RBP7.03□□□□□ -1.28
GTDC1-202ENST00000344850 DCAF8L1A6NGE4 600 aa7.03□□□□□ -1.28
GTDC1-202ENST00000344850 NEUROD2Q15784 382 aa7.02□□□□□ -1.29
GTDC1-202ENST00000344850 EEA1Q15075 1411 aa7.01□□□□□ -1.29
GTDC1-202ENST00000344850 ITSN2Q9NZM3 1697 aa7□□□□□ -1.29
GTDC1-202ENST00000344850 SYNMO15061 1565 aa6.99□□□□□ -1.29
GTDC1-202ENST00000344850 DEPDC5O75140 1603 aa6.99□□□□□ -1.29
GTDC1-202ENST00000344850 MIER1Q8N108 512 aa6.99□□□□□ -1.29
GTDC1-202ENST00000344850 ABCA6Q8N139 1617 aa6.99□□□□□ -1.29
GTDC1-202ENST00000344850 RAPGEF3O95398 923 aa6.98□□□□□ -1.29
GTDC1-202ENST00000344850 ZMYND15Q9H091 742 aa6.98□□□□□ -1.29
GTDC1-202ENST00000344850 MYO3AQ8NEV4 1616 aa6.98□□□□□ -1.29
GTDC1-202ENST00000344850 PLXNC1O60486 1568 aa6.98□□□□□ -1.29
GTDC1-202ENST00000344850 POLR1AO95602 1720 aaPredicted RBP6.98□□□□□ -1.29
GTDC1-202ENST00000344850 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 SCAPERQ9BY12 1400 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 CAMSAP1Q5T5Y3 1602 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 KCNH8Q96L42 1107 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 RSPH6AQ9H0K4 717 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 KIF14Q15058 1648 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 PREX2Q70Z35 1606 aa6.97□□□□□ -1.29
GTDC1-202ENST00000344850 ABCC1P33527 1531 aa6.96□□□□□ -1.29
GTDC1-202ENST00000344850 ARID4BQ4LE39 1312 aaPredicted RBP6.96□□□□□ -1.29
GTDC1-202ENST00000344850 MED14O60244 1454 aa6.96□□□□□ -1.3
GTDC1-202ENST00000344850 RNF25Q96BH1 459 aaPredicted RBP6.96□□□□□ -1.3
GTDC1-202ENST00000344850 CEP170BQ9Y4F5 1589 aaPredicted RBP6.96□□□□□ -1.3
GTDC1-202ENST00000344850 PLEKHD1A6NEE1 506 aa6.96□□□□□ -1.3
GTDC1-202ENST00000344850 ZBTB47Q9UFB7 747 aaPredicted RBP6.96□□□□□ -1.3
GTDC1-202ENST00000344850 ZC3H15Q8WU90 426 aaKnown RBP6.95□□□□□ -1.3
GTDC1-202ENST00000344850 A2ML1A8K2U0 1454 aa6.94□□□□□ -1.3
GTDC1-202ENST00000344850 HSPA2P54652 639 aa6.94□□□□□ -1.3
GTDC1-202ENST00000344850 RNF17Q9BXT8 1623 aaKnown RBP6.94□□□□□ -1.3
GTDC1-202ENST00000344850 KIDINS220Q9ULH0 1771 aa6.94□□□□□ -1.3
GTDC1-202ENST00000344850 EFCAB2Q5VUJ9 269 aa6.94□□□□□ -1.3
GTDC1-202ENST00000344850 PLEKHH2Q8IVE3 1493 aa6.93□□□□□ -1.3
GTDC1-202ENST00000344850 ADGBQ8N7X0 1667 aa6.93□□□□□ -1.3
GTDC1-202ENST00000344850 VWDEQ8N2E2 1590 aa6.93□□□□□ -1.3
GTDC1-202ENST00000344850 INO80Q9ULG1 1556 aaPredicted RBP6.92□□□□□ -1.3
GTDC1-202ENST00000344850 TROQ12816 1431 aaPredicted RBP6.92□□□□□ -1.3
GTDC1-202ENST00000344850 CDC42BPBQ9Y5S2 1711 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 SLC24A3Q9HC58 644 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 RYDENQ9NUL5 291 aaKnown RBP6.92□□□□□ -1.3
GTDC1-202ENST00000344850 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 KIAA1107Q9UPP5 1409 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 SUPT6HQ7KZ85 1726 aaKnown RBP6.92□□□□□ -1.3
GTDC1-202ENST00000344850 POLA2Q14181 598 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 NEURL4Q96JN8 1562 aa6.92□□□□□ -1.3
GTDC1-202ENST00000344850 FMN1Q68DA7 1419 aa6.91□□□□□ -1.3
GTDC1-202ENST00000344850 RIOK3O14730 519 aaKnown RBP6.91□□□□□ -1.3
GTDC1-202ENST00000344850 CLIP1P30622 1438 aa6.91□□□□□ -1.3
GTDC1-202ENST00000344850 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
GTDC1-202ENST00000344850 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.3
GTDC1-202ENST00000344850 CCDC18Q5T9S5 1454 aa6.9□□□□□ -1.31
GTDC1-202ENST00000344850 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
GTDC1-202ENST00000344850 SAMD9LQ8IVG5 1584 aa6.9□□□□□ -1.31
GTDC1-202ENST00000344850 PLEKHG5O94827 1062 aa6.89□□□□□ -1.31
GTDC1-202ENST00000344850 NLRP1Q9C000 1473 aa6.89□□□□□ -1.31
GTDC1-202ENST00000344850 GSE1Q14687 1217 aa6.89□□□□□ -1.31
GTDC1-202ENST00000344850 KDM5AP29375 1690 aaKnown RBP6.88□□□□□ -1.31
GTDC1-202ENST00000344850 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
GTDC1-202ENST00000344850 ZBTB12Q9Y330 459 aaPredicted RBP6.88□□□□□ -1.31
GTDC1-202ENST00000344850 RTEL1-TNFRSF6BF6WH68 1400 aa6.88□□□□□ -1.31
GTDC1-202ENST00000344850 CDK11AQ9UQ88 783 aaPredicted RBP6.88□□□□□ -1.31
GTDC1-202ENST00000344850 CAMSAP2Q08AD1 1489 aa6.88□□□□□ -1.31
GTDC1-202ENST00000344850 ZC3H13Q5T200 1668 aaKnown RBP6.87□□□□□ -1.31
GTDC1-202ENST00000344850 STK25O00506 426 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 TOM1O60784 492 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 POTEHQ6S545 545 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 ARHGAP5Q13017 1502 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
GTDC1-202ENST00000344850 ZBTB7CA1YPR0 619 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
GTDC1-202ENST00000344850 LRRC9Q6ZRR7 1453 aa6.86□□□□□ -1.31
GTDC1-202ENST00000344850 ARID3AQ99856 593 aa6.86□□□□□ -1.31
GTDC1-202ENST00000344850 CDK13Q14004 1512 aaKnown RBP6.86□□□□□ -1.31
GTDC1-202ENST00000344850 ZMYM3Q14202 1370 aa6.86□□□□□ -1.31
GTDC1-202ENST00000344850 CDC42BPAQ5VT25 1732 aa6.86□□□□□ -1.31
GTDC1-202ENST00000344850 PZPP20742 1482 aa6.86□□□□□ -1.31
GTDC1-202ENST00000344850 TTBK1Q5TCY1 1321 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-202ENST00000344850 ATP7AQ04656 1500 aa6.85□□□□□ -1.31
GTDC1-202ENST00000344850 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-202ENST00000344850 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-202ENST00000344850 IQGAP1P46940 1657 aa6.85□□□□□ -1.31
GTDC1-202ENST00000344850 LOC105371045A0A1W2PR82 267 aa6.84□□□□□ -1.31
GTDC1-202ENST00000344850 UBAP1LF5GYI3 381 aa6.84□□□□□ -1.31
GTDC1-202ENST00000344850 ZNF692Q9BU19 519 aaPredicted RBP6.84□□□□□ -1.31
GTDC1-202ENST00000344850 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
GTDC1-202ENST00000344850 FAM135BQ49AJ0 1406 aa6.83□□□□□ -1.32
GTDC1-202ENST00000344850 A2MP01023 1474 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms