RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 WASHC2CQ9Y4E1 1318 aa31.11■■■□□ 2.57
CEACAM3-201ENST00000344550 DUOX2Q9NRD8 1548 aa31.1■■■□□ 2.57
CEACAM3-201ENST00000344550 RNF17Q9BXT8 1623 aaKnown RBP31.08■■■□□ 2.57
CEACAM3-201ENST00000344550 DAPK1P53355 1430 aa31.07■■■□□ 2.57
CEACAM3-201ENST00000344550 DNMT1P26358 1616 aaKnown RBP31.06■■■□□ 2.56
CEACAM3-201ENST00000344550 PZPP20742 1482 aa31.05■■■□□ 2.56
CEACAM3-201ENST00000344550 CROCC2H7BZ55 1655 aa31.05■■■□□ 2.56
CEACAM3-201ENST00000344550 ILDR1Q86SU0 546 aaPredicted RBP31.04■■■□□ 2.56
CEACAM3-201ENST00000344550 KIF15Q9NS87 1388 aa31.04■■■□□ 2.56
CEACAM3-201ENST00000344550 ERBINQ96RT1 1412 aa31.03■■■□□ 2.56
CEACAM3-201ENST00000344550 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
CEACAM3-201ENST00000344550 PTPRTO14522 1441 aa31.02■■■□□ 2.56
CEACAM3-201ENST00000344550 ZNF142P52746 1687 aaPredicted RBP31■■■□□ 2.55
CEACAM3-201ENST00000344550 NCOA1Q15788 1441 aa31■■■□□ 2.55
CEACAM3-201ENST00000344550 ANKRD30AQ9BXX3 1397 aa31■■■□□ 2.55
CEACAM3-201ENST00000344550 ZC3H13Q5T200 1668 aaKnown RBP30.99■■■□□ 2.55
CEACAM3-201ENST00000344550 MYO3AQ8NEV4 1616 aa30.98■■■□□ 2.55
CEACAM3-201ENST00000344550 PLA2R1Q13018 1463 aa30.97■■■□□ 2.55
CEACAM3-201ENST00000344550 CEP170BQ9Y4F5 1589 aaPredicted RBP30.96■■■□□ 2.55
CEACAM3-201ENST00000344550 FBXO41Q8TF61 875 aa30.96■■■□□ 2.55
CEACAM3-201ENST00000344550 TNRQ92752 1358 aa30.95■■■□□ 2.55
CEACAM3-201ENST00000344550 RRP7BPQ9NSQ0 103 aa30.95■■■□□ 2.55
CEACAM3-201ENST00000344550 A2ML1A8K2U0 1454 aa30.95■■■□□ 2.54
CEACAM3-201ENST00000344550 ABCC3O15438 1527 aa30.94■■■□□ 2.54
CEACAM3-201ENST00000344550 CAMSAP1Q5T5Y3 1602 aa30.94■■■□□ 2.54
CEACAM3-201ENST00000344550 PKD2Q13563 968 aa30.93■■■□□ 2.54
CEACAM3-201ENST00000344550 ADGRL2O95490 1459 aa30.92■■■□□ 2.54
CEACAM3-201ENST00000344550 MROH1Q8NDA8 1641 aa30.91■■■□□ 2.54
CEACAM3-201ENST00000344550 FBXO31Q5XUX0 539 aaPredicted RBP30.91■■■□□ 2.54
CEACAM3-201ENST00000344550 NLRP1Q9C000 1473 aa30.9■■■□□ 2.54
CEACAM3-201ENST00000344550 FAM50AQ14320 339 aaKnown RBP30.89■■■□□ 2.54
CEACAM3-201ENST00000344550 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
CEACAM3-201ENST00000344550 ARHGAP31Q2M1Z3 1444 aa30.86■■■□□ 2.53
CEACAM3-201ENST00000344550 CERKQ8TCT0 537 aa30.85■■■□□ 2.53
CEACAM3-201ENST00000344550 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
CEACAM3-201ENST00000344550 KANK1Q14678 1352 aa30.84■■■□□ 2.53
CEACAM3-201ENST00000344550 DEPDC5O75140 1603 aa30.84■■■□□ 2.53
CEACAM3-201ENST00000344550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.83■■■□□ 2.53
CEACAM3-201ENST00000344550 SPATA31D1Q6ZQQ2 1576 aa30.83■■■□□ 2.53
CEACAM3-201ENST00000344550 THEMISQ8N1K5 641 aaPredicted RBP30.82■■■□□ 2.52
CEACAM3-201ENST00000344550 ERVK-7P63135 1459 aa30.78■■■□□ 2.52
CEACAM3-201ENST00000344550 NCKAP5LQ9HCH0 1330 aa30.77■■■□□ 2.52
CEACAM3-201ENST00000344550 LMTK2Q8IWU2 1503 aa30.76■■■□□ 2.51
CEACAM3-201ENST00000344550 ROCK1Q13464 1354 aa30.76■■■□□ 2.51
CEACAM3-201ENST00000344550 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 CEP152O94986 1710 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 VWDEQ8N2E2 1590 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 UGGT1Q9NYU2 1555 aa30.74■■■□□ 2.51
CEACAM3-201ENST00000344550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.72■■■□□ 2.51
CEACAM3-201ENST00000344550 ANKLE2Q86XL3 938 aa30.71■■■□□ 2.51
CEACAM3-201ENST00000344550 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
CEACAM3-201ENST00000344550 LTBP4Q8N2S1 1624 aa30.67■■■□□ 2.5
CEACAM3-201ENST00000344550 POLR1AO95602 1720 aaPredicted RBP30.63■■■□□ 2.49
CEACAM3-201ENST00000344550 MED14O60244 1454 aa30.63■■■□□ 2.49
CEACAM3-201ENST00000344550 RPRD2Q5VT52 1461 aaKnown RBP30.61■■■□□ 2.49
CEACAM3-201ENST00000344550 EFCAB6Q5THR3 1501 aa30.59■■■□□ 2.49
CEACAM3-201ENST00000344550 NEURL4Q96JN8 1562 aa30.58■■■□□ 2.49
CEACAM3-201ENST00000344550 RRBP1Q9P2E9 1410 aaKnown RBP30.58■■■□□ 2.49
CEACAM3-201ENST00000344550 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
CEACAM3-201ENST00000344550 PPARGC1BQ86YN6 1023 aaKnown RBP30.56■■■□□ 2.48
CEACAM3-201ENST00000344550 NOS1P29475 1434 aa30.56■■■□□ 2.48
CEACAM3-201ENST00000344550 ZNF335Q9H4Z2 1342 aaPredicted RBP30.55■■■□□ 2.48
CEACAM3-201ENST00000344550 UBR1Q8IWV7 1749 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 KDM5AP29375 1690 aaKnown RBP30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 NPHP4O75161 1426 aaPredicted RBP30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 UNC13BO14795 1591 aa30.54■■■□□ 2.48
CEACAM3-201ENST00000344550 SLIT1O75093 1534 aa30.52■■■□□ 2.48
CEACAM3-201ENST00000344550 ARHGAP23Q9P227 1491 aa30.51■■■□□ 2.48
CEACAM3-201ENST00000344550 TET3O43151 1660 aa30.5■■■□□ 2.47
CEACAM3-201ENST00000344550 IDI1Q13907 227 aa30.48■■■□□ 2.47
CEACAM3-201ENST00000344550 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 ITGAEP38570 1179 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 CPS1P31327 1500 aa30.47■■■□□ 2.47
CEACAM3-201ENST00000344550 STAG3Q9UJ98 1225 aa30.46■■■□□ 2.47
CEACAM3-201ENST00000344550 IQGAP1P46940 1657 aa30.45■■■□□ 2.46
CEACAM3-201ENST00000344550 PIK3C2BO00750 1634 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 TMEM2Q9UHN6 1383 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 SYNMO15061 1565 aa30.44■■■□□ 2.46
CEACAM3-201ENST00000344550 GCC2Q8IWJ2 1684 aa30.43■■■□□ 2.46
CEACAM3-201ENST00000344550 TXNDC2Q86VQ3 553 aa30.43■■■□□ 2.46
CEACAM3-201ENST00000344550 IQGAP3Q86VI3 1631 aa30.42■■■□□ 2.46
CEACAM3-201ENST00000344550 NUP155O75694 1391 aa30.4■■■□□ 2.46
CEACAM3-201ENST00000344550 LTKP29376 864 aa30.39■■■□□ 2.46
CEACAM3-201ENST00000344550 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
CEACAM3-201ENST00000344550 HDGFP51858 240 aaKnown RBP30.33■■■□□ 2.45
CEACAM3-201ENST00000344550 NAIPQ13075 1403 aa30.3■■■□□ 2.44
CEACAM3-201ENST00000344550 E9PCH4 1651 aa30.3■■■□□ 2.44
CEACAM3-201ENST00000344550 UBAP1LF5GYI3 381 aa30.28■■■□□ 2.44
CEACAM3-201ENST00000344550 HFM1A2PYH4 1435 aa30.28■■■□□ 2.44
CEACAM3-201ENST00000344550 TOM1O60784 492 aa30.24■■■□□ 2.43
CEACAM3-201ENST00000344550 TMEM131LA2VDJ0 1609 aa30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 ZFYVE9O95405 1425 aa30.22■■■□□ 2.43
CEACAM3-201ENST00000344550 LRRC7Q96NW7 1537 aa30.18■■■□□ 2.42
CEACAM3-201ENST00000344550 PLEKHG1Q9ULL1 1385 aa30.16■■■□□ 2.42
CEACAM3-201ENST00000344550 RIMS2Q9UQ26 1411 aa30.16■■■□□ 2.42
CEACAM3-201ENST00000344550 ACIN1Q9UKV3 1341 aaKnown RBP30.15■■■□□ 2.42
CEACAM3-201ENST00000344550 STRCP1A6NGW2 1772 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms