RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.93
HERPUD1-202ENST00000344114 NEURL4Q96JN8 1562 aa20.83■□□□□ 0.93
HERPUD1-202ENST00000344114 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
HERPUD1-202ENST00000344114 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
HERPUD1-202ENST00000344114 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
HERPUD1-202ENST00000344114 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
HERPUD1-202ENST00000344114 CPS1P31327 1500 aa20.79■□□□□ 0.92
HERPUD1-202ENST00000344114 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
HERPUD1-202ENST00000344114 PZPP20742 1482 aa20.78■□□□□ 0.92
HERPUD1-202ENST00000344114 TNRQ92752 1358 aa20.76■□□□□ 0.91
HERPUD1-202ENST00000344114 CCDC141Q6ZP82 1450 aa20.74■□□□□ 0.91
HERPUD1-202ENST00000344114 SHANK2Q9UPX8 1470 aa20.74■□□□□ 0.91
HERPUD1-202ENST00000344114 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
HERPUD1-202ENST00000344114 FBXO31Q5XUX0 539 aaPredicted RBP20.73■□□□□ 0.91
HERPUD1-202ENST00000344114 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
HERPUD1-202ENST00000344114 DEPDC5O75140 1603 aa20.72■□□□□ 0.91
HERPUD1-202ENST00000344114 MAP3K1Q13233 1512 aa20.72■□□□□ 0.91
HERPUD1-202ENST00000344114 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
HERPUD1-202ENST00000344114 KIF3BO15066 747 aa20.71■□□□□ 0.91
HERPUD1-202ENST00000344114 HSPA1LP34931 641 aa20.71■□□□□ 0.91
HERPUD1-202ENST00000344114 MED14O60244 1454 aa20.7■□□□□ 0.9
HERPUD1-202ENST00000344114 NLRP1Q9C000 1473 aa20.7■□□□□ 0.9
HERPUD1-202ENST00000344114 UGGT1Q9NYU2 1555 aa20.69■□□□□ 0.9
HERPUD1-202ENST00000344114 TOM1O60784 492 aa20.69■□□□□ 0.9
HERPUD1-202ENST00000344114 APLP2Q06481 763 aa20.69■□□□□ 0.9
HERPUD1-202ENST00000344114 ALKQ9UM73 1620 aa20.68■□□□□ 0.9
HERPUD1-202ENST00000344114 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
HERPUD1-202ENST00000344114 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
HERPUD1-202ENST00000344114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
HERPUD1-202ENST00000344114 NCOA2Q15596 1464 aa20.67■□□□□ 0.9
HERPUD1-202ENST00000344114 RSPH4AQ5TD94 716 aa20.67■□□□□ 0.9
HERPUD1-202ENST00000344114 ANKLE2Q86XL3 938 aa20.67■□□□□ 0.9
HERPUD1-202ENST00000344114 WASHC2CQ9Y4E1 1318 aa20.67■□□□□ 0.9
HERPUD1-202ENST00000344114 PIP4K2BP78356 416 aa20.66■□□□□ 0.9
HERPUD1-202ENST00000344114 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
HERPUD1-202ENST00000344114 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
HERPUD1-202ENST00000344114 IQGAP1P46940 1657 aa20.65■□□□□ 0.9
HERPUD1-202ENST00000344114 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
HERPUD1-202ENST00000344114 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
HERPUD1-202ENST00000344114 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
HERPUD1-202ENST00000344114 ZC3H13Q5T200 1668 aaKnown RBP20.65■□□□□ 0.9
HERPUD1-202ENST00000344114 STRCP1A6NGW2 1772 aa20.63■□□□□ 0.89
HERPUD1-202ENST00000344114 MAST1Q9Y2H9 1570 aa20.61■□□□□ 0.89
HERPUD1-202ENST00000344114 ABCC3O15438 1527 aa20.6■□□□□ 0.89
HERPUD1-202ENST00000344114 SYNMO15061 1565 aa20.6■□□□□ 0.89
HERPUD1-202ENST00000344114 EIF2AK4Q9P2K8 1649 aaKnown RBP20.6■□□□□ 0.89
HERPUD1-202ENST00000344114 MROH1Q8NDA8 1641 aa20.57■□□□□ 0.88
HERPUD1-202ENST00000344114 LRRC7Q96NW7 1537 aa20.57■□□□□ 0.88
HERPUD1-202ENST00000344114 TSPY4P0CV99 314 aa20.56■□□□□ 0.88
HERPUD1-202ENST00000344114 TSPY10P0CW01 314 aa20.56■□□□□ 0.88
HERPUD1-202ENST00000344114 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
HERPUD1-202ENST00000344114 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
HERPUD1-202ENST00000344114 CEP152O94986 1710 aa20.54■□□□□ 0.88
HERPUD1-202ENST00000344114 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
HERPUD1-202ENST00000344114 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
HERPUD1-202ENST00000344114 XIRP1Q702N8 1843 aaKnown RBP20.48■□□□□ 0.87
HERPUD1-202ENST00000344114 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
HERPUD1-202ENST00000344114 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
HERPUD1-202ENST00000344114 ARHGAP23Q9P227 1491 aa20.47■□□□□ 0.87
HERPUD1-202ENST00000344114 SLIT1O75093 1534 aa20.47■□□□□ 0.87
HERPUD1-202ENST00000344114 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.86
HERPUD1-202ENST00000344114 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
HERPUD1-202ENST00000344114 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
HERPUD1-202ENST00000344114 ARHGAP31Q2M1Z3 1444 aa20.43■□□□□ 0.86
HERPUD1-202ENST00000344114 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
HERPUD1-202ENST00000344114 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
HERPUD1-202ENST00000344114 LTKP29376 864 aa20.4■□□□□ 0.86
HERPUD1-202ENST00000344114 PIK3C2BO00750 1634 aa20.39■□□□□ 0.86
HERPUD1-202ENST00000344114 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
HERPUD1-202ENST00000344114 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
HERPUD1-202ENST00000344114 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-202ENST00000344114 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
HERPUD1-202ENST00000344114 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
HERPUD1-202ENST00000344114 HRCP23327 699 aa20.35■□□□□ 0.85
HERPUD1-202ENST00000344114 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
HERPUD1-202ENST00000344114 FAM135BQ49AJ0 1406 aa20.34■□□□□ 0.85
HERPUD1-202ENST00000344114 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
HERPUD1-202ENST00000344114 TMEM2Q9UHN6 1383 aa20.33■□□□□ 0.84
HERPUD1-202ENST00000344114 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
HERPUD1-202ENST00000344114 ABCC5O15440 1437 aa20.31■□□□□ 0.84
HERPUD1-202ENST00000344114 LMTK2Q8IWU2 1503 aa20.3■□□□□ 0.84
HERPUD1-202ENST00000344114 PTPN23Q9H3S7 1636 aa20.3■□□□□ 0.84
HERPUD1-202ENST00000344114 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
HERPUD1-202ENST00000344114 TET3O43151 1660 aa20.29■□□□□ 0.84
HERPUD1-202ENST00000344114 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
HERPUD1-202ENST00000344114 NWD1Q149M9 1564 aa20.27■□□□□ 0.84
HERPUD1-202ENST00000344114 TMEM94Q12767 1356 aa20.27■□□□□ 0.83
HERPUD1-202ENST00000344114 DAPK1P53355 1430 aa20.25■□□□□ 0.83
HERPUD1-202ENST00000344114 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
HERPUD1-202ENST00000344114 KANK1Q14678 1352 aa20.25■□□□□ 0.83
HERPUD1-202ENST00000344114 KCNA6P17658 529 aa20.24■□□□□ 0.83
HERPUD1-202ENST00000344114 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
HERPUD1-202ENST00000344114 IDI1Q13907 227 aa20.23■□□□□ 0.83
HERPUD1-202ENST00000344114 NKTRP30414 1462 aaKnown RBP20.23■□□□□ 0.83
HERPUD1-202ENST00000344114 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.835e-8■□□□□ 9.6
HERPUD1-202ENST00000344114 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
HERPUD1-202ENST00000344114 NOS1P29475 1434 aa20.22■□□□□ 0.83
HERPUD1-202ENST00000344114 POTEAQ6S8J7 498 aa20.2■□□□□ 0.82
HERPUD1-202ENST00000344114 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
HERPUD1-202ENST00000344114 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms