RNA–Protein interactions for RNA: ENST00000343705.3

PDCD1-202, Transcript of programmed cell death 1, humanhuman

TSL 1 (best)

Gene PDCD1, Length 366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-202ENST00000343705 DUOX2Q9NRD8 1548 aa19.04■□□□□ 0.64
PDCD1-202ENST00000343705 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
PDCD1-202ENST00000343705 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
PDCD1-202ENST00000343705 RNF17Q9BXT8 1623 aaKnown RBP19.02■□□□□ 0.64
PDCD1-202ENST00000343705 ABCC5O15440 1437 aa19.01■□□□□ 0.63
PDCD1-202ENST00000343705 DAPK1P53355 1430 aa19.01■□□□□ 0.63
PDCD1-202ENST00000343705 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
PDCD1-202ENST00000343705 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
PDCD1-202ENST00000343705 ZNF142P52746 1687 aaPredicted RBP18.99■□□□□ 0.63
PDCD1-202ENST00000343705 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
PDCD1-202ENST00000343705 PZPP20742 1482 aa18.98■□□□□ 0.63
PDCD1-202ENST00000343705 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
PDCD1-202ENST00000343705 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
PDCD1-202ENST00000343705 KIF15Q9NS87 1388 aa18.97■□□□□ 0.63
PDCD1-202ENST00000343705 ILDR1Q86SU0 546 aaPredicted RBP18.97■□□□□ 0.63
PDCD1-202ENST00000343705 PTPRTO14522 1441 aa18.97■□□□□ 0.63
PDCD1-202ENST00000343705 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
PDCD1-202ENST00000343705 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
PDCD1-202ENST00000343705 CAMSAP1Q5T5Y3 1602 aa18.94■□□□□ 0.62
PDCD1-202ENST00000343705 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
PDCD1-202ENST00000343705 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
PDCD1-202ENST00000343705 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
PDCD1-202ENST00000343705 TNRQ92752 1358 aa18.93■□□□□ 0.62
PDCD1-202ENST00000343705 ABCC3O15438 1527 aa18.92■□□□□ 0.62
PDCD1-202ENST00000343705 PKD2Q13563 968 aa18.92■□□□□ 0.62
PDCD1-202ENST00000343705 FAM50AQ14320 339 aaKnown RBP18.92■□□□□ 0.62
PDCD1-202ENST00000343705 FBXO41Q8TF61 875 aa18.92■□□□□ 0.62
PDCD1-202ENST00000343705 ADGRL2O95490 1459 aa18.9■□□□□ 0.62
PDCD1-202ENST00000343705 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
PDCD1-202ENST00000343705 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
PDCD1-202ENST00000343705 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
PDCD1-202ENST00000343705 FBXO31Q5XUX0 539 aaPredicted RBP18.89■□□□□ 0.61
PDCD1-202ENST00000343705 KANK1Q14678 1352 aa18.89■□□□□ 0.61
PDCD1-202ENST00000343705 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
PDCD1-202ENST00000343705 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
PDCD1-202ENST00000343705 CEP152O94986 1710 aa18.87■□□□□ 0.61
PDCD1-202ENST00000343705 CERKQ8TCT0 537 aa18.87■□□□□ 0.61
PDCD1-202ENST00000343705 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
PDCD1-202ENST00000343705 ARHGAP31Q2M1Z3 1444 aa18.86■□□□□ 0.61
PDCD1-202ENST00000343705 THEMISQ8N1K5 641 aaPredicted RBP18.86■□□□□ 0.61
PDCD1-202ENST00000343705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
PDCD1-202ENST00000343705 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
PDCD1-202ENST00000343705 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
PDCD1-202ENST00000343705 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
PDCD1-202ENST00000343705 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
PDCD1-202ENST00000343705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDCD1-202ENST00000343705 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
PDCD1-202ENST00000343705 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
PDCD1-202ENST00000343705 LMTK2Q8IWU2 1503 aa18.8■□□□□ 0.6
PDCD1-202ENST00000343705 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
PDCD1-202ENST00000343705 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
PDCD1-202ENST00000343705 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
PDCD1-202ENST00000343705 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.59
PDCD1-202ENST00000343705 LTBP4Q8N2S1 1624 aa18.74■□□□□ 0.59
PDCD1-202ENST00000343705 MED14O60244 1454 aa18.72■□□□□ 0.59
PDCD1-202ENST00000343705 RPRD2Q5VT52 1461 aaKnown RBP18.72■□□□□ 0.59
PDCD1-202ENST00000343705 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
PDCD1-202ENST00000343705 EFCAB6Q5THR3 1501 aa18.72■□□□□ 0.59
PDCD1-202ENST00000343705 KDM5AP29375 1690 aaKnown RBP18.72■□□□□ 0.59
PDCD1-202ENST00000343705 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
PDCD1-202ENST00000343705 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
PDCD1-202ENST00000343705 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
PDCD1-202ENST00000343705 UNC13BO14795 1591 aa18.69■□□□□ 0.58
PDCD1-202ENST00000343705 TET3O43151 1660 aa18.69■□□□□ 0.58
PDCD1-202ENST00000343705 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
PDCD1-202ENST00000343705 SLC52A1Q9NWF4 448 aa18.68■□□□□ 0.58
PDCD1-202ENST00000343705 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
PDCD1-202ENST00000343705 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
PDCD1-202ENST00000343705 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
PDCD1-202ENST00000343705 ITGAEP38570 1179 aa18.67■□□□□ 0.58
PDCD1-202ENST00000343705 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
PDCD1-202ENST00000343705 NOS1P29475 1434 aa18.66■□□□□ 0.58
PDCD1-202ENST00000343705 SLIT1O75093 1534 aa18.66■□□□□ 0.58
PDCD1-202ENST00000343705 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
PDCD1-202ENST00000343705 PIK3C2BO00750 1634 aa18.66■□□□□ 0.58
PDCD1-202ENST00000343705 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
PDCD1-202ENST00000343705 CPS1P31327 1500 aa18.64■□□□□ 0.58
PDCD1-202ENST00000343705 IDI1Q13907 227 aa18.64■□□□□ 0.57
PDCD1-202ENST00000343705 SCAF11Q99590 1463 aaKnown RBP18.64■□□□□ 0.57
PDCD1-202ENST00000343705 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
PDCD1-202ENST00000343705 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
PDCD1-202ENST00000343705 SYNMO15061 1565 aa18.62■□□□□ 0.57
PDCD1-202ENST00000343705 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
PDCD1-202ENST00000343705 NUP155O75694 1391 aa18.6■□□□□ 0.57
PDCD1-202ENST00000343705 HDGFP51858 240 aaKnown RBP18.59■□□□□ 0.57
PDCD1-202ENST00000343705 ADGRB3O60242 1522 aa18.59■□□□□ 0.57
PDCD1-202ENST00000343705 E9PCH4 1651 aa18.57■□□□□ 0.56
PDCD1-202ENST00000343705 LTKP29376 864 aa18.56■□□□□ 0.56
PDCD1-202ENST00000343705 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
PDCD1-202ENST00000343705 NAIPQ13075 1403 aa18.52■□□□□ 0.56
PDCD1-202ENST00000343705 TOM1O60784 492 aa18.52■□□□□ 0.56
PDCD1-202ENST00000343705 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
PDCD1-202ENST00000343705 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
PDCD1-202ENST00000343705 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
PDCD1-202ENST00000343705 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.49■□□□□ 0.55
PDCD1-202ENST00000343705 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
PDCD1-202ENST00000343705 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
PDCD1-202ENST00000343705 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
PDCD1-202ENST00000343705 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
PDCD1-202ENST00000343705 LRRC7Q96NW7 1537 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms