RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 CEP170BQ9Y4F5 1589 aaPredicted RBP28■■■□□ 2.07
USF2-202ENST00000343550 ZNF142P52746 1687 aaPredicted RBP28■■■□□ 2.07
USF2-202ENST00000343550 PKD2Q13563 968 aa27.99■■■□□ 2.07
USF2-202ENST00000343550 FBXO31Q5XUX0 539 aaPredicted RBP27.98■■■□□ 2.07
USF2-202ENST00000343550 PLA2R1Q13018 1463 aa27.98■■■□□ 2.07
USF2-202ENST00000343550 MIA2Q96PC5 1412 aa27.97■■■□□ 2.07
USF2-202ENST00000343550 KDM5DQ9BY66 1539 aa27.97■■■□□ 2.07
USF2-202ENST00000343550 LTBP4Q8N2S1 1624 aa27.96■■■□□ 2.07
USF2-202ENST00000343550 FAM135AQ9P2D6 1515 aa27.95■■■□□ 2.07
USF2-202ENST00000343550 A2ML1A8K2U0 1454 aa27.94■■■□□ 2.06
USF2-202ENST00000343550 TNRQ92752 1358 aa27.93■■■□□ 2.06
USF2-202ENST00000343550 PZPP20742 1482 aa27.93■■■□□ 2.06
USF2-202ENST00000343550 TCOF1Q13428 1488 aaKnown RBP27.93■■■□□ 2.06
USF2-202ENST00000343550 MAST1Q9Y2H9 1570 aa27.91■■■□□ 2.06
USF2-202ENST00000343550 DNMT1P26358 1616 aaKnown RBP27.89■■■□□ 2.05
USF2-202ENST00000343550 ZNF335Q9H4Z2 1342 aaPredicted RBP27.88■■■□□ 2.05
USF2-202ENST00000343550 IQSEC2Q5JU85 1478 aa27.86■■■□□ 2.05
USF2-202ENST00000343550 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
USF2-202ENST00000343550 FGD6Q6ZV73 1430 aa27.84■■■□□ 2.05
USF2-202ENST00000343550 RNF17Q9BXT8 1623 aaKnown RBP27.83■■■□□ 2.05
USF2-202ENST00000343550 THEMISQ8N1K5 641 aaPredicted RBP27.81■■■□□ 2.04
USF2-202ENST00000343550 PTPN23Q9H3S7 1636 aa27.8■■■□□ 2.04
USF2-202ENST00000343550 NLRP1Q9C000 1473 aa27.8■■■□□ 2.04
USF2-202ENST00000343550 EIF2AK4Q9P2K8 1649 aaKnown RBP27.79■■■□□ 2.04
USF2-202ENST00000343550 ABCC3O15438 1527 aa27.79■■■□□ 2.04
USF2-202ENST00000343550 ABCC5O15440 1437 aa27.78■■■□□ 2.04
USF2-202ENST00000343550 DUOX2Q9NRD8 1548 aa27.78■■■□□ 2.04
USF2-202ENST00000343550 ANKLE2Q86XL3 938 aa27.77■■■□□ 2.04
USF2-202ENST00000343550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
USF2-202ENST00000343550 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.03
USF2-202ENST00000343550 KIF15Q9NS87 1388 aa27.75■■■□□ 2.03
USF2-202ENST00000343550 ZC3H13Q5T200 1668 aaKnown RBP27.74■■■□□ 2.03
USF2-202ENST00000343550 SHANK2Q9UPX8 1470 aa27.74■■■□□ 2.03
USF2-202ENST00000343550 UGGT1Q9NYU2 1555 aa27.74■■■□□ 2.03
USF2-202ENST00000343550 MROH1Q8NDA8 1641 aa27.74■■■□□ 2.03
USF2-202ENST00000343550 NEURL4Q96JN8 1562 aa27.71■■■□□ 2.03
USF2-202ENST00000343550 DAPK1P53355 1430 aa27.71■■■□□ 2.03
USF2-202ENST00000343550 SPATA31D1Q6ZQQ2 1576 aa27.7■■■□□ 2.03
USF2-202ENST00000343550 UBAP1LF5GYI3 381 aa27.7■■■□□ 2.02
USF2-202ENST00000343550 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.02
USF2-202ENST00000343550 POLR1AO95602 1720 aaPredicted RBP27.7■■■□□ 2.02
USF2-202ENST00000343550 ERVK-7P63135 1459 aa27.69■■■□□ 2.02
USF2-202ENST00000343550 ERBINQ96RT1 1412 aa27.69■■■□□ 2.02
USF2-202ENST00000343550 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
USF2-202ENST00000343550 CHIC2Q9UKJ5 165 aa27.65■■■□□ 2.02
USF2-202ENST00000343550 CEP152O94986 1710 aa27.64■■■□□ 2.02
USF2-202ENST00000343550 NPHP4O75161 1426 aaPredicted RBP27.64■■■□□ 2.02
USF2-202ENST00000343550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.64■■■□□ 2.021e-6■■□□□ 12.1
USF2-202ENST00000343550 MED14O60244 1454 aa27.64■■■□□ 2.01
USF2-202ENST00000343550 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
USF2-202ENST00000343550 ANKRD30AQ9BXX3 1397 aa27.62■■■□□ 2.01
USF2-202ENST00000343550 DEPDC5O75140 1603 aa27.62■■■□□ 2.01
USF2-202ENST00000343550 DISP3Q9P2K9 1392 aa27.61■■■□□ 2.01
USF2-202ENST00000343550 ARHGAP31Q2M1Z3 1444 aa27.61■■■□□ 2.01
USF2-202ENST00000343550 CPS1P31327 1500 aa27.6■■■□□ 2.01
USF2-202ENST00000343550 KANK1Q14678 1352 aa27.58■■■□□ 2.01
USF2-202ENST00000343550 CFAP65Q6ZU64 1925 aaKnown RBP27.57■■■□□ 2
USF2-202ENST00000343550 VWDEQ8N2E2 1590 aa27.56■■■□□ 2
USF2-202ENST00000343550 IQGAP1P46940 1657 aa27.53■■■□□ 2
USF2-202ENST00000343550 TOM1O60784 492 aa27.52■■■□□ 2
USF2-202ENST00000343550 UBR1Q8IWV7 1749 aa27.52■■■□□ 2
USF2-202ENST00000343550 LTKP29376 864 aa27.49■■□□□ 1.99
USF2-202ENST00000343550 TXNDC2Q86VQ3 553 aa27.49■■□□□ 1.99
USF2-202ENST00000343550 ADGRL2O95490 1459 aa27.48■■□□□ 1.99
USF2-202ENST00000343550 PIP4K2BP78356 416 aa27.48■■□□□ 1.99
USF2-202ENST00000343550 LMTK2Q8IWU2 1503 aa27.48■■□□□ 1.99
USF2-202ENST00000343550 SCAF11Q99590 1463 aaKnown RBP27.48■■□□□ 1.99
USF2-202ENST00000343550 RRBP1Q9P2E9 1410 aaKnown RBP27.48■■□□□ 1.99
USF2-202ENST00000343550 SCAF1Q9H7N4 1312 aaKnown RBP27.47■■□□□ 1.99
USF2-202ENST00000343550 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
USF2-202ENST00000343550 ILDR2Q71H61 639 aa27.46■■□□□ 1.99
USF2-202ENST00000343550 SLIT1O75093 1534 aa27.46■■□□□ 1.99
USF2-202ENST00000343550 EID1Q9Y6B2 187 aa27.46■■□□□ 1.99
USF2-202ENST00000343550 ITGAEP38570 1179 aa27.45■■□□□ 1.98
USF2-202ENST00000343550 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
USF2-202ENST00000343550 IDI1Q13907 227 aa27.44■■□□□ 1.98
USF2-202ENST00000343550 ANKRD50Q9ULJ7 1429 aa27.42■■□□□ 1.98
USF2-202ENST00000343550 TMEM2Q9UHN6 1383 aa27.41■■□□□ 1.98
USF2-202ENST00000343550 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
USF2-202ENST00000343550 HSPA1LP34931 641 aa27.41■■□□□ 1.98
USF2-202ENST00000343550 LRRC7Q96NW7 1537 aa27.39■■□□□ 1.98
USF2-202ENST00000343550 STRCP1A6NGW2 1772 aa27.38■■□□□ 1.97
USF2-202ENST00000343550 NOS1P29475 1434 aa27.38■■□□□ 1.97
USF2-202ENST00000343550 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
USF2-202ENST00000343550 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
USF2-202ENST00000343550 SLC52A1Q9NWF4 448 aa27.35■■□□□ 1.97
USF2-202ENST00000343550 SYNMO15061 1565 aa27.34■■□□□ 1.97
USF2-202ENST00000343550 KDM5AP29375 1690 aaKnown RBP27.33■■□□□ 1.97
USF2-202ENST00000343550 ALKQ9UM73 1620 aa27.32■■□□□ 1.96
USF2-202ENST00000343550 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
USF2-202ENST00000343550 SOCS7O14512 581 aa27.3■■□□□ 1.96
USF2-202ENST00000343550 ADGRB3O60242 1522 aa27.25■■□□□ 1.95
USF2-202ENST00000343550 SLC26A8Q96RN1 970 aa27.25■■□□□ 1.95
USF2-202ENST00000343550 TET3O43151 1660 aa27.23■■□□□ 1.95
USF2-202ENST00000343550 KCNA6P17658 529 aa27.22■■□□□ 1.95
USF2-202ENST00000343550 UNC13BO14795 1591 aa27.2■■□□□ 1.95
USF2-202ENST00000343550 BCANQ96GW7 911 aa27.19■■□□□ 1.94
USF2-202ENST00000343550 SENP3Q9H4L4 574 aaPredicted RBP27.19■■□□□ 1.94
USF2-202ENST00000343550 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
USF2-202ENST00000343550 TMEM94Q12767 1356 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms