RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ADGRL1O94910 1474 aa26.23■■□□□ 1.79
HOXA9-201ENST00000343483 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.79
HOXA9-201ENST00000343483 RTEL1-TNFRSF6BF6WH68 1400 aa26.22■■□□□ 1.79
HOXA9-201ENST00000343483 ZFYVE16Q7Z3T8 1539 aa26.22■■□□□ 1.79
HOXA9-201ENST00000343483 SCAPERQ9BY12 1400 aa26.2■■□□□ 1.79
HOXA9-201ENST00000343483 IQGAP3Q86VI3 1631 aa26.16■■□□□ 1.78
HOXA9-201ENST00000343483 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
HOXA9-201ENST00000343483 MYT1LQ9UL68 1186 aa26.16■■□□□ 1.78
HOXA9-201ENST00000343483 MAGI2Q86UL8 1455 aa26.15■■□□□ 1.78
HOXA9-201ENST00000343483 RAPGEF3O95398 923 aa26.15■■□□□ 1.78
HOXA9-201ENST00000343483 ATP7AQ04656 1500 aa26.14■■□□□ 1.77
HOXA9-201ENST00000343483 INO80Q9ULG1 1556 aaPredicted RBP26.12■■□□□ 1.77
HOXA9-201ENST00000343483 CCDC144AA2RUR9 1427 aa26.11■■□□□ 1.77
HOXA9-201ENST00000343483 NEO1Q92859 1461 aa26.11■■□□□ 1.77
HOXA9-201ENST00000343483 WASHC2AQ641Q2 1341 aa26.08■■□□□ 1.77
HOXA9-201ENST00000343483 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
HOXA9-201ENST00000343483 DCAF11Q8TEB1 546 aa26.05■■□□□ 1.76
HOXA9-201ENST00000343483 KDM2AQ9Y2K7 1162 aa26.05■■□□□ 1.76
HOXA9-201ENST00000343483 UHRF1BP1Q6BDS2 1440 aa26.04■■□□□ 1.76
HOXA9-201ENST00000343483 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
HOXA9-201ENST00000343483 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
HOXA9-201ENST00000343483 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
HOXA9-201ENST00000343483 ANP32CO43423 234 aa26.03■■□□□ 1.76
HOXA9-201ENST00000343483 FRMPD1Q5SYB0 1578 aa26.02■■□□□ 1.76
HOXA9-201ENST00000343483 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
HOXA9-201ENST00000343483 KIF3BO15066 747 aa26■■□□□ 1.75
HOXA9-201ENST00000343483 RGL3Q3MIN7 710 aa25.99■■□□□ 1.75
HOXA9-201ENST00000343483 C11orf95C9JLR9 678 aaPredicted RBP25.98■■□□□ 1.75
HOXA9-201ENST00000343483 RICTORQ6R327 1708 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 ATP10AO60312 1499 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 POGZQ7Z3K3 1410 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 DEPDC5O75140 1603 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 USP47Q96K76 1375 aa25.98■■□□□ 1.75
HOXA9-201ENST00000343483 KANK1Q14678 1352 aa25.96■■□□□ 1.75
HOXA9-201ENST00000343483 CCDC7Q96M83 1385 aa25.96■■□□□ 1.75
HOXA9-201ENST00000343483 KIDINS220Q9ULH0 1771 aa25.96■■□□□ 1.75
HOXA9-201ENST00000343483 CARD11Q9BXL7 1154 aa25.93■■□□□ 1.74
HOXA9-201ENST00000343483 EIF2AK4Q9P2K8 1649 aaKnown RBP25.93■■□□□ 1.74
HOXA9-201ENST00000343483 E9PCH4 1651 aa25.92■■□□□ 1.74
HOXA9-201ENST00000343483 KDM5CP41229 1560 aa25.92■■□□□ 1.74
HOXA9-201ENST00000343483 A2MP01023 1474 aa25.9■■□□□ 1.74
HOXA9-201ENST00000343483 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
HOXA9-201ENST00000343483 PRDM15P57071 1507 aaPredicted RBP25.89■■□□□ 1.73
HOXA9-201ENST00000343483 VWDEQ8N2E2 1590 aa25.89■■□□□ 1.73
HOXA9-201ENST00000343483 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
HOXA9-201ENST00000343483 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
HOXA9-201ENST00000343483 CCER2I3L3R5 266 aa25.88■■□□□ 1.73
HOXA9-201ENST00000343483 MLH3Q9UHC1 1453 aa25.88■■□□□ 1.73
HOXA9-201ENST00000343483 TET3O43151 1660 aa25.87■■□□□ 1.73
HOXA9-201ENST00000343483 ROCK2O75116 1388 aaKnown RBP25.87■■□□□ 1.73
HOXA9-201ENST00000343483 YEATS2Q9ULM3 1422 aa25.87■■□□□ 1.73
HOXA9-201ENST00000343483 HECW2Q9P2P5 1572 aa25.87■■□□□ 1.73
HOXA9-201ENST00000343483 MROH1Q8NDA8 1641 aa25.86■■□□□ 1.73
HOXA9-201ENST00000343483 TRPM2O94759 1503 aa25.85■■□□□ 1.73
HOXA9-201ENST00000343483 PTPRTO14522 1441 aa25.83■■□□□ 1.73
HOXA9-201ENST00000343483 SPHKAPQ2M3C7 1700 aa25.81■■□□□ 1.72
HOXA9-201ENST00000343483 POLR1AO95602 1720 aaPredicted RBP25.81■■□□□ 1.72
HOXA9-201ENST00000343483 ZMYM4Q5VZL5 1548 aa25.8■■□□□ 1.72
HOXA9-201ENST00000343483 TRPM1Q7Z4N2 1603 aa25.79■■□□□ 1.72
HOXA9-201ENST00000343483 BCORL1Q5H9F3 1711 aa25.79■■□□□ 1.72
HOXA9-201ENST00000343483 POLR3GLQ9BT43 218 aa25.78■■□□□ 1.72
HOXA9-201ENST00000343483 ST20-MTHFSA0A0A6YYL1 179 aa25.78■■□□□ 1.72
HOXA9-201ENST00000343483 ABCA6Q8N139 1617 aa25.77■■□□□ 1.72
HOXA9-201ENST00000343483 NBPF1Q3BBV0 1214 aa25.76■■□□□ 1.71
HOXA9-201ENST00000343483 CLTCL1P53675 1640 aa25.76■■□□□ 1.71
HOXA9-201ENST00000343483 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
HOXA9-201ENST00000343483 RNF17Q9BXT8 1623 aaKnown RBP25.76■■□□□ 1.71
HOXA9-201ENST00000343483 EFCAB6Q5THR3 1501 aa25.75■■□□□ 1.71
HOXA9-201ENST00000343483 PELP1Q8IZL8 1130 aaKnown RBP25.75■■□□□ 1.71
HOXA9-201ENST00000343483 ARHGEF40Q8TER5 1519 aa25.75■■□□□ 1.71
HOXA9-201ENST00000343483 GGT6Q6P531 493 aa25.75■■□□□ 1.71
HOXA9-201ENST00000343483 ARID4BQ4LE39 1312 aaPredicted RBP25.73■■□□□ 1.71
HOXA9-201ENST00000343483 LMTK2Q8IWU2 1503 aa25.72■■□□□ 1.71
HOXA9-201ENST00000343483 KDM4FA0A1W2PPD8 638 aa25.72■■□□□ 1.71
HOXA9-201ENST00000343483 CEP152O94986 1710 aa25.71■■□□□ 1.71
HOXA9-201ENST00000343483 GPRASP1Q5JY77 1395 aa25.71■■□□□ 1.71
HOXA9-201ENST00000343483 DIP2CQ9Y2E4 1556 aa25.69■■□□□ 1.7
HOXA9-201ENST00000343483 UGGT1Q9NYU2 1555 aa25.68■■□□□ 1.7
HOXA9-201ENST00000343483 PRKRIP1Q9H875 184 aaPredicted RBP25.66■■□□□ 1.7
HOXA9-201ENST00000343483 WASHC2CQ9Y4E1 1318 aa25.66■■□□□ 1.7
HOXA9-201ENST00000343483 LAMC1P11047 1609 aa25.64■■□□□ 1.7
HOXA9-201ENST00000343483 MLECQ14165 292 aa25.64■■□□□ 1.69
HOXA9-201ENST00000343483 MADDQ8WXG6 1647 aa25.63■■□□□ 1.69
HOXA9-201ENST00000343483 NPATQ14207 1427 aa25.63■■□□□ 1.69
HOXA9-201ENST00000343483 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
HOXA9-201ENST00000343483 ABCC3O15438 1527 aa25.61■■□□□ 1.69
HOXA9-201ENST00000343483 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
HOXA9-201ENST00000343483 SUPT16HQ9Y5B9 1047 aaKnown RBP25.58■■□□□ 1.69
HOXA9-201ENST00000343483 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
HOXA9-201ENST00000343483 KIF1BO60333 1816 aa25.54■■□□□ 1.68
HOXA9-201ENST00000343483 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
HOXA9-201ENST00000343483 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
HOXA9-201ENST00000343483 TESK2Q96S53 571 aa25.53■■□□□ 1.68
HOXA9-201ENST00000343483 CAMSAP1Q5T5Y3 1602 aa25.52■■□□□ 1.68
HOXA9-201ENST00000343483 MRS2Q9HD23 443 aa25.51■■□□□ 1.67
HOXA9-201ENST00000343483 MYOM2P54296 1465 aa25.51■■□□□ 1.67
HOXA9-201ENST00000343483 MROH2AA6NES4 1674 aa25.5■■□□□ 1.67
HOXA9-201ENST00000343483 DISP3Q9P2K9 1392 aa25.5■■□□□ 1.67
HOXA9-201ENST00000343483 ADGRB3O60242 1522 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms