RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 A2MP01023 1474 aa13.14□□□□□ -0.31
NLRC4-201ENST00000342905 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
NLRC4-201ENST00000342905 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
NLRC4-201ENST00000342905 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
NLRC4-201ENST00000342905 MLECQ14165 292 aa13.12□□□□□ -0.31
NLRC4-201ENST00000342905 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
NLRC4-201ENST00000342905 FER1L4A9Z1Z3 1794 aa13.11□□□□□ -0.31
NLRC4-201ENST00000342905 SHANK2Q9UPX8 1470 aa13.11□□□□□ -0.31
NLRC4-201ENST00000342905 ITGAEP38570 1179 aa13.09□□□□□ -0.31
NLRC4-201ENST00000342905 DHX29Q7Z478 1369 aaKnown RBP13.09□□□□□ -0.31
NLRC4-201ENST00000342905 PTPRKQ15262 1439 aa13.08□□□□□ -0.31
NLRC4-201ENST00000342905 ABCC5O15440 1437 aa13.08□□□□□ -0.32
NLRC4-201ENST00000342905 DAPK1P53355 1430 aa13.08□□□□□ -0.32
NLRC4-201ENST00000342905 CNTLNQ9NXG0 1405 aa13.08□□□□□ -0.32
NLRC4-201ENST00000342905 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
NLRC4-201ENST00000342905 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
NLRC4-201ENST00000342905 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
NLRC4-201ENST00000342905 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.32
NLRC4-201ENST00000342905 ANKRD30AQ9BXX3 1397 aa13.02□□□□□ -0.33
NLRC4-201ENST00000342905 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
NLRC4-201ENST00000342905 MROH2AA6NES4 1674 aa13.02□□□□□ -0.33
NLRC4-201ENST00000342905 KIF3BO15066 747 aa13.01□□□□□ -0.33
NLRC4-201ENST00000342905 CAPN15O75808 1086 aa13.01□□□□□ -0.33
NLRC4-201ENST00000342905 DSG3P32926 999 aa13.01□□□□□ -0.33
NLRC4-201ENST00000342905 GGT6Q6P531 493 aa13.01□□□□□ -0.33
NLRC4-201ENST00000342905 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
NLRC4-201ENST00000342905 ERBINQ96RT1 1412 aa13□□□□□ -0.33
NLRC4-201ENST00000342905 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
NLRC4-201ENST00000342905 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
NLRC4-201ENST00000342905 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
NLRC4-201ENST00000342905 C3P01024 1663 aa12.99□□□□□ -0.33
NLRC4-201ENST00000342905 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
NLRC4-201ENST00000342905 NAIPQ13075 1403 aa12.98□□□□□ -0.33
NLRC4-201ENST00000342905 NCOA1Q15788 1441 aa12.98□□□□□ -0.33
NLRC4-201ENST00000342905 CLTCQ00610 1675 aaKnown RBP12.98□□□□□ -0.33
NLRC4-201ENST00000342905 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
NLRC4-201ENST00000342905 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
NLRC4-201ENST00000342905 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 NPATQ14207 1427 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
NLRC4-201ENST00000342905 PREX1Q8TCU6 1659 aa12.95□□□□□ -0.34
NLRC4-201ENST00000342905 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
NLRC4-201ENST00000342905 ZC3H13Q5T200 1668 aaKnown RBP12.95□□□□□ -0.34
NLRC4-201ENST00000342905 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
NLRC4-201ENST00000342905 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
NLRC4-201ENST00000342905 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
NLRC4-201ENST00000342905 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
NLRC4-201ENST00000342905 ABCC3O15438 1527 aa12.93□□□□□ -0.34
NLRC4-201ENST00000342905 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
NLRC4-201ENST00000342905 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
NLRC4-201ENST00000342905 PZPP20742 1482 aa12.92□□□□□ -0.34
NLRC4-201ENST00000342905 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
NLRC4-201ENST00000342905 KANK1Q14678 1352 aa12.9□□□□□ -0.34
NLRC4-201ENST00000342905 UNC13BO14795 1591 aa12.9□□□□□ -0.34
NLRC4-201ENST00000342905 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
NLRC4-201ENST00000342905 DHX57Q6P158 1386 aaKnown RBP12.89□□□□□ -0.35
NLRC4-201ENST00000342905 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
NLRC4-201ENST00000342905 HRCP23327 699 aa12.87□□□□□ -0.35
NLRC4-201ENST00000342905 HSPA2P54652 639 aa12.87□□□□□ -0.35
NLRC4-201ENST00000342905 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
NLRC4-201ENST00000342905 MYO3AQ8NEV4 1616 aa12.87□□□□□ -0.35
NLRC4-201ENST00000342905 VWDEQ8N2E2 1590 aa12.87□□□□□ -0.35
NLRC4-201ENST00000342905 TNRQ92752 1358 aa12.86□□□□□ -0.35
NLRC4-201ENST00000342905 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
NLRC4-201ENST00000342905 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
NLRC4-201ENST00000342905 ARHGAP31Q2M1Z3 1444 aa12.86□□□□□ -0.35
NLRC4-201ENST00000342905 CEP152O94986 1710 aa12.86□□□□□ -0.35
NLRC4-201ENST00000342905 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
NLRC4-201ENST00000342905 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
NLRC4-201ENST00000342905 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
NLRC4-201ENST00000342905 FBXO31Q5XUX0 539 aaPredicted RBP12.84□□□□□ -0.35
NLRC4-201ENST00000342905 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
NLRC4-201ENST00000342905 A2ML1A8K2U0 1454 aa12.83□□□□□ -0.36
NLRC4-201ENST00000342905 ERVK-7P63135 1459 aa12.83□□□□□ -0.36
NLRC4-201ENST00000342905 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
NLRC4-201ENST00000342905 EFCAB6Q5THR3 1501 aa12.82□□□□□ -0.36
NLRC4-201ENST00000342905 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
NLRC4-201ENST00000342905 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
NLRC4-201ENST00000342905 CFAP65Q6ZU64 1925 aaKnown RBP12.79□□□□□ -0.36
NLRC4-201ENST00000342905 TET3O43151 1660 aa12.79□□□□□ -0.36
NLRC4-201ENST00000342905 E9PCH4 1651 aa12.78□□□□□ -0.36
NLRC4-201ENST00000342905 NUP155O75694 1391 aa12.77□□□□□ -0.37
NLRC4-201ENST00000342905 STRCQ7RTU9 1775 aa12.77□□□□□ -0.37
NLRC4-201ENST00000342905 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
NLRC4-201ENST00000342905 ACIN1Q9UKV3 1341 aaKnown RBP12.77□□□□□ -0.37
NLRC4-201ENST00000342905 UGGT1Q9NYU2 1555 aa12.76□□□□□ -0.37
NLRC4-201ENST00000342905 NOS1P29475 1434 aa12.76□□□□□ -0.37
NLRC4-201ENST00000342905 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
NLRC4-201ENST00000342905 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
NLRC4-201ENST00000342905 PTPRTO14522 1441 aa12.75□□□□□ -0.37
NLRC4-201ENST00000342905 ZEB1P37275 1124 aaPredicted RBP12.75□□□□□ -0.37
NLRC4-201ENST00000342905 PKD2Q13563 968 aa12.75□□□□□ -0.37
NLRC4-201ENST00000342905 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
NLRC4-201ENST00000342905 SYNMO15061 1565 aa12.73□□□□□ -0.37
NLRC4-201ENST00000342905 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.37
NLRC4-201ENST00000342905 MPHOSPH9Q99550 1183 aa12.71□□□□□ -0.37
NLRC4-201ENST00000342905 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms