RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 KDM5DQ9BY66 1539 aa31.77■■■□□ 2.68
SDHC-201ENST00000342751 ZNF142P52746 1687 aaPredicted RBP31.75■■■□□ 2.67
SDHC-201ENST00000342751 WASHC2CQ9Y4E1 1318 aa31.75■■■□□ 2.67
SDHC-201ENST00000342751 CEP170BQ9Y4F5 1589 aaPredicted RBP31.74■■■□□ 2.67
SDHC-201ENST00000342751 PTPN23Q9H3S7 1636 aa31.74■■■□□ 2.67
SDHC-201ENST00000342751 FBXO31Q5XUX0 539 aaPredicted RBP31.7■■■□□ 2.67
SDHC-201ENST00000342751 NCKAP5LQ9HCH0 1330 aa31.69■■■□□ 2.66
SDHC-201ENST00000342751 PZPP20742 1482 aa31.66■■■□□ 2.66
SDHC-201ENST00000342751 FAM135AQ9P2D6 1515 aa31.66■■■□□ 2.66
SDHC-201ENST00000342751 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
SDHC-201ENST00000342751 TNRQ92752 1358 aa31.66■■■□□ 2.66
SDHC-201ENST00000342751 FGD6Q6ZV73 1430 aa31.66■■■□□ 2.66
SDHC-201ENST00000342751 RNF17Q9BXT8 1623 aaKnown RBP31.65■■■□□ 2.66
SDHC-201ENST00000342751 ABCC5O15440 1437 aa31.64■■■□□ 2.66
SDHC-201ENST00000342751 EIF2AK4Q9P2K8 1649 aaKnown RBP31.63■■■□□ 2.65
SDHC-201ENST00000342751 A2ML1A8K2U0 1454 aa31.62■■■□□ 2.65
SDHC-201ENST00000342751 PLA2R1Q13018 1463 aa31.62■■■□□ 2.65
SDHC-201ENST00000342751 LTBP4Q8N2S1 1624 aa31.62■■■□□ 2.65
SDHC-201ENST00000342751 DUOX2Q9NRD8 1548 aa31.61■■■□□ 2.65
SDHC-201ENST00000342751 KIF15Q9NS87 1388 aa31.61■■■□□ 2.65
SDHC-201ENST00000342751 RRP7BPQ9NSQ0 103 aa31.61■■■□□ 2.65
SDHC-201ENST00000342751 DAPK1P53355 1430 aa31.6■■■□□ 2.65
SDHC-201ENST00000342751 ABCC3O15438 1527 aa31.59■■■□□ 2.65
SDHC-201ENST00000342751 SHANK2Q9UPX8 1470 aa31.59■■■□□ 2.65
SDHC-201ENST00000342751 DNMT1P26358 1616 aaKnown RBP31.58■■■□□ 2.65
SDHC-201ENST00000342751 TCOF1Q13428 1488 aaKnown RBP31.58■■■□□ 2.65
SDHC-201ENST00000342751 PKD2Q13563 968 aa31.57■■■□□ 2.64
SDHC-201ENST00000342751 CHIC2Q9UKJ5 165 aa31.56■■■□□ 2.64
SDHC-201ENST00000342751 MROH1Q8NDA8 1641 aa31.56■■■□□ 2.64
SDHC-201ENST00000342751 CEP152O94986 1710 aa31.55■■■□□ 2.64
SDHC-201ENST00000342751 ZC3H13Q5T200 1668 aaKnown RBP31.55■■■□□ 2.64
SDHC-201ENST00000342751 FAM50AQ14320 339 aaKnown RBP31.52■■■□□ 2.64
SDHC-201ENST00000342751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.5■■■□□ 2.63
SDHC-201ENST00000342751 ERBINQ96RT1 1412 aa31.49■■■□□ 2.63
SDHC-201ENST00000342751 IQSEC2Q5JU85 1478 aa31.48■■■□□ 2.63
SDHC-201ENST00000342751 ZNF335Q9H4Z2 1342 aaPredicted RBP31.48■■■□□ 2.63
SDHC-201ENST00000342751 NLRP1Q9C000 1473 aa31.46■■■□□ 2.63
SDHC-201ENST00000342751 ANKRD30AQ9BXX3 1397 aa31.45■■■□□ 2.63
SDHC-201ENST00000342751 POLR1AO95602 1720 aaPredicted RBP31.45■■■□□ 2.63
SDHC-201ENST00000342751 ERVK-7P63135 1459 aa31.45■■■□□ 2.62
SDHC-201ENST00000342751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.44■■■□□ 2.62
SDHC-201ENST00000342751 PRDM15P57071 1507 aaPredicted RBP31.44■■■□□ 2.62
SDHC-201ENST00000342751 UGGT1Q9NYU2 1555 aa31.43■■■□□ 2.62
SDHC-201ENST00000342751 CFAP65Q6ZU64 1925 aaKnown RBP31.43■■■□□ 2.62
SDHC-201ENST00000342751 SPATA31D1Q6ZQQ2 1576 aa31.43■■■□□ 2.62
SDHC-201ENST00000342751 THEMISQ8N1K5 641 aaPredicted RBP31.39■■■□□ 2.62
SDHC-201ENST00000342751 NEURL4Q96JN8 1562 aa31.39■■■□□ 2.61
SDHC-201ENST00000342751 PPARGC1BQ86YN6 1023 aaKnown RBP31.37■■■□□ 2.61
SDHC-201ENST00000342751 KANK1Q14678 1352 aa31.37■■■□□ 2.61
SDHC-201ENST00000342751 DEPDC5O75140 1603 aa31.36■■■□□ 2.61
SDHC-201ENST00000342751 ANKLE2Q86XL3 938 aa31.36■■■□□ 2.61
SDHC-201ENST00000342751 ADGRL2O95490 1459 aa31.31■■■□□ 2.6
SDHC-201ENST00000342751 NPHP4O75161 1426 aaPredicted RBP31.28■■■□□ 2.6
SDHC-201ENST00000342751 ARHGAP31Q2M1Z3 1444 aa31.27■■■□□ 2.6
SDHC-201ENST00000342751 UBR1Q8IWV7 1749 aa31.25■■■□□ 2.59
SDHC-201ENST00000342751 UBAP1LF5GYI3 381 aa31.25■■■□□ 2.59
SDHC-201ENST00000342751 ANKRD50Q9ULJ7 1429 aa31.23■■■□□ 2.59
SDHC-201ENST00000342751 IQGAP1P46940 1657 aa31.22■■■□□ 2.59
SDHC-201ENST00000342751 MED14O60244 1454 aa31.22■■■□□ 2.59
SDHC-201ENST00000342751 ITGAEP38570 1179 aa31.22■■■□□ 2.59
SDHC-201ENST00000342751 VWDEQ8N2E2 1590 aa31.22■■■□□ 2.59
SDHC-201ENST00000342751 CPS1P31327 1500 aa31.21■■■□□ 2.59
SDHC-201ENST00000342751 LMTK2Q8IWU2 1503 aa31.2■■■□□ 2.59
SDHC-201ENST00000342751 PIK3C2BO00750 1634 aa31.19■■■□□ 2.58
SDHC-201ENST00000342751 STAG3Q9UJ98 1225 aa31.18■■■□□ 2.58
SDHC-201ENST00000342751 DISP3Q9P2K9 1392 aa31.17■■■□□ 2.58
SDHC-201ENST00000342751 EFCAB6Q5THR3 1501 aa31.17■■■□□ 2.58
SDHC-201ENST00000342751 SCAF11Q99590 1463 aaKnown RBP31.14■■■□□ 2.58
SDHC-201ENST00000342751 SYNMO15061 1565 aa31.13■■■□□ 2.57
SDHC-201ENST00000342751 TXNDC2Q86VQ3 553 aa31.11■■■□□ 2.57
SDHC-201ENST00000342751 SCAF1Q9H7N4 1312 aaKnown RBP31.11■■■□□ 2.57
SDHC-201ENST00000342751 LTKP29376 864 aa31.1■■■□□ 2.57
SDHC-201ENST00000342751 SLIT1O75093 1534 aa31.08■■■□□ 2.57
SDHC-201ENST00000342751 ARHGAP23Q9P227 1491 aa31.08■■■□□ 2.57
SDHC-201ENST00000342751 EID1Q9Y6B2 187 aa31.08■■■□□ 2.57
SDHC-201ENST00000342751 IDI1Q13907 227 aa31.07■■■□□ 2.56
SDHC-201ENST00000342751 NOS1P29475 1434 aa31.06■■■□□ 2.56
SDHC-201ENST00000342751 UNC13BO14795 1591 aa31.05■■■□□ 2.56
SDHC-201ENST00000342751 ROCK1Q13464 1354 aa31.05■■■□□ 2.56
SDHC-201ENST00000342751 TET3O43151 1660 aa31.04■■■□□ 2.56
SDHC-201ENST00000342751 PIP4K2BP78356 416 aa31.04■■■□□ 2.56
SDHC-201ENST00000342751 STRCP1A6NGW2 1772 aa31.04■■■□□ 2.56
SDHC-201ENST00000342751 TMEM2Q9UHN6 1383 aa31.04■■■□□ 2.56
SDHC-201ENST00000342751 TOM1O60784 492 aa31.02■■■□□ 2.56
SDHC-201ENST00000342751 ADGRB3O60242 1522 aa31.01■■■□□ 2.55
SDHC-201ENST00000342751 GCC2Q8IWJ2 1684 aa31■■■□□ 2.55
SDHC-201ENST00000342751 RPRD2Q5VT52 1461 aaKnown RBP30.99■■■□□ 2.55
SDHC-201ENST00000342751 SENP3Q9H4L4 574 aaPredicted RBP30.98■■■□□ 2.55
SDHC-201ENST00000342751 ILDR2Q71H61 639 aa30.97■■■□□ 2.55
SDHC-201ENST00000342751 KDM5AP29375 1690 aaKnown RBP30.97■■■□□ 2.55
SDHC-201ENST00000342751 LRRC7Q96NW7 1537 aa30.95■■■□□ 2.55
SDHC-201ENST00000342751 SLC52A1Q9NWF4 448 aa30.95■■■□□ 2.55
SDHC-201ENST00000342751 E9PCH4 1651 aa30.93■■■□□ 2.54
SDHC-201ENST00000342751 NUP155O75694 1391 aa30.92■■■□□ 2.54
SDHC-201ENST00000342751 IQGAP3Q86VI3 1631 aa30.92■■■□□ 2.54
SDHC-201ENST00000342751 CHGAP10645 457 aaKnown RBP30.92■■■□□ 2.54
SDHC-201ENST00000342751 BCANQ96GW7 911 aa30.92■■■□□ 2.54
SDHC-201ENST00000342751 ALKQ9UM73 1620 aa30.91■■■□□ 2.54
SDHC-201ENST00000342751 HSPA1LP34931 641 aa30.91■■■□□ 2.54
SDHC-201ENST00000342751 MYO5BQ9ULV0 1848 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms