RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 COG3Q96JB2 828 aa19.24■□□□□ 0.67
PCDHB13-201ENST00000341948 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
PCDHB13-201ENST00000341948 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
PCDHB13-201ENST00000341948 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
PCDHB13-201ENST00000341948 USP47Q96K76 1375 aa19.2■□□□□ 0.66
PCDHB13-201ENST00000341948 STK31Q9BXU1 1019 aa19.2■□□□□ 0.66
PCDHB13-201ENST00000341948 CGNL1Q0VF96 1302 aa19.19■□□□□ 0.66
PCDHB13-201ENST00000341948 SCAPERQ9BY12 1400 aa19.19■□□□□ 0.66
PCDHB13-201ENST00000341948 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
PCDHB13-201ENST00000341948 PSME1Q06323 249 aa19.19■□□□□ 0.66
PCDHB13-201ENST00000341948 KCNJ4P48050 445 aa19.18■□□□□ 0.66
PCDHB13-201ENST00000341948 STAC3Q96MF2 364 aa19.18■□□□□ 0.66
PCDHB13-201ENST00000341948 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
PCDHB13-201ENST00000341948 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
PCDHB13-201ENST00000341948 EVA1CP58658 441 aa19.17■□□□□ 0.66
PCDHB13-201ENST00000341948 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
PCDHB13-201ENST00000341948 RCAN3Q9UKA8 241 aa19.17■□□□□ 0.66
PCDHB13-201ENST00000341948 ERICH6BQ5W0A0 696 aa19.16■□□□□ 0.66
PCDHB13-201ENST00000341948 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
PCDHB13-201ENST00000341948 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
PCDHB13-201ENST00000341948 APBB1O00213 710 aa19.15■□□□□ 0.66
PCDHB13-201ENST00000341948 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
PCDHB13-201ENST00000341948 ATF3P18847 181 aa19.15■□□□□ 0.66
PCDHB13-201ENST00000341948 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
PCDHB13-201ENST00000341948 FGD1P98174 961 aa19.14■□□□□ 0.65
PCDHB13-201ENST00000341948 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
PCDHB13-201ENST00000341948 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
PCDHB13-201ENST00000341948 SMC4Q9NTJ3 1288 aa19.11■□□□□ 0.65
PCDHB13-201ENST00000341948 TAOK2Q9UL54 1235 aa19.11■□□□□ 0.65
PCDHB13-201ENST00000341948 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
PCDHB13-201ENST00000341948 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
PCDHB13-201ENST00000341948 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
PCDHB13-201ENST00000341948 TRIM44Q96DX7 344 aaPredicted RBP19.09■□□□□ 0.65
PCDHB13-201ENST00000341948 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.65
PCDHB13-201ENST00000341948 THEMISQ8N1K5 641 aaPredicted RBP19.08■□□□□ 0.64
PCDHB13-201ENST00000341948 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
PCDHB13-201ENST00000341948 C1orf141Q5JVX7 400 aa19.07■□□□□ 0.64
PCDHB13-201ENST00000341948 SLC4A10Q6U841 1118 aa19.07■□□□□ 0.64
PCDHB13-201ENST00000341948 HSP90AB1P08238 724 aaKnown RBP19.06■□□□□ 0.64
PCDHB13-201ENST00000341948 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
PCDHB13-201ENST00000341948 CHMP3Q9Y3E7 222 aa19.06■□□□□ 0.64
PCDHB13-201ENST00000341948 CLUAP1Q96AJ1 413 aa19.05■□□□□ 0.64
PCDHB13-201ENST00000341948 MIA2Q96PC5 1412 aa19.05■□□□□ 0.64
PCDHB13-201ENST00000341948 PDE3BQ13370 1112 aa19.05■□□□□ 0.64
PCDHB13-201ENST00000341948 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 TMX4Q9H1E5 349 aaPredicted RBP19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 EHBP1L1Q8N3D4 1523 aa19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 TEFQ10587 303 aa19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 CABP2Q9NPB3 220 aa19.04■□□□□ 0.64
PCDHB13-201ENST00000341948 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
PCDHB13-201ENST00000341948 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 SLC52A1Q9NWF4 448 aa19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
PCDHB13-201ENST00000341948 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.63
PCDHB13-201ENST00000341948 DIAPH1O60610 1272 aaKnown RBP19.01■□□□□ 0.63
PCDHB13-201ENST00000341948 HSCBQ8IWL3 235 aa19■□□□□ 0.63
PCDHB13-201ENST00000341948 CFAP44Q96MT7 982 aa19■□□□□ 0.63
PCDHB13-201ENST00000341948 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
PCDHB13-201ENST00000341948 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
PCDHB13-201ENST00000341948 GORABQ5T7V8 394 aa18.99■□□□□ 0.63
PCDHB13-201ENST00000341948 CDK13Q14004 1512 aaKnown RBP18.99■□□□□ 0.63
PCDHB13-201ENST00000341948 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
PCDHB13-201ENST00000341948 RBM19Q9Y4C8 960 aaKnown RBP18.99■□□□□ 0.63
PCDHB13-201ENST00000341948 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 RRBP1Q9P2E9 1410 aaKnown RBP18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 NLRP6P59044 892 aa18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 POGZQ7Z3K3 1410 aa18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
PCDHB13-201ENST00000341948 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 TCERG1O14776 1098 aaKnown RBP18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 MCCP23508 829 aa18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 PTMAP06454 111 aaKnown RBP18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
PCDHB13-201ENST00000341948 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 HMMRO75330 724 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 PRAM1Q96QH2 718 aa18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
PCDHB13-201ENST00000341948 APAF1O14727 1248 aa18.94■□□□□ 0.62
PCDHB13-201ENST00000341948 CDK11BP21127 795 aaKnown RBP18.94■□□□□ 0.62
PCDHB13-201ENST00000341948 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
PCDHB13-201ENST00000341948 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
PCDHB13-201ENST00000341948 PMFBP1Q8TBY8 1022 aa18.93■□□□□ 0.62
PCDHB13-201ENST00000341948 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
PCDHB13-201ENST00000341948 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
PCDHB13-201ENST00000341948 NBPF1Q3BBV0 1214 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms