RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 FAM135AQ9P2D6 1515 aa21.16■□□□□ 0.98
TPM3-208ENST00000341485 KDM5CP41229 1560 aa21.15■□□□□ 0.98
TPM3-208ENST00000341485 KIDINS220Q9ULH0 1771 aa21.14■□□□□ 0.97
TPM3-208ENST00000341485 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
TPM3-208ENST00000341485 HECW2Q9P2P5 1572 aa21.12■□□□□ 0.97
TPM3-208ENST00000341485 IQGAP3Q86VI3 1631 aa21.11■□□□□ 0.97
TPM3-208ENST00000341485 RPRD2Q5VT52 1461 aaKnown RBP21.1■□□□□ 0.97
TPM3-208ENST00000341485 MAGI2Q86UL8 1455 aa21.1■□□□□ 0.97
TPM3-208ENST00000341485 MLH3Q9UHC1 1453 aa21.1■□□□□ 0.97
TPM3-208ENST00000341485 L3MBTL2Q969R5 705 aa21.1■□□□□ 0.97
TPM3-208ENST00000341485 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
TPM3-208ENST00000341485 ANP32CO43423 234 aa21.09■□□□□ 0.97
TPM3-208ENST00000341485 TEX14Q8IWB6 1497 aa21.09■□□□□ 0.97
TPM3-208ENST00000341485 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
TPM3-208ENST00000341485 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
TPM3-208ENST00000341485 EIF2AK4Q9P2K8 1649 aaKnown RBP21.08■□□□□ 0.96
TPM3-208ENST00000341485 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.96
TPM3-208ENST00000341485 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
TPM3-208ENST00000341485 PPRC1Q5VV67 1664 aaKnown RBP21.07■□□□□ 0.96
TPM3-208ENST00000341485 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
TPM3-208ENST00000341485 A2MP01023 1474 aa21.05■□□□□ 0.96
TPM3-208ENST00000341485 KIF3BO15066 747 aa21.05■□□□□ 0.96
TPM3-208ENST00000341485 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
TPM3-208ENST00000341485 KANK1Q14678 1352 aa21.03■□□□□ 0.96
TPM3-208ENST00000341485 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
TPM3-208ENST00000341485 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.95
TPM3-208ENST00000341485 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
TPM3-208ENST00000341485 WASHC2AQ641Q2 1341 aa21.01■□□□□ 0.95
TPM3-208ENST00000341485 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
TPM3-208ENST00000341485 NBPF8Q3BBV2 869 aa20.99■□□□□ 0.95
TPM3-208ENST00000341485 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
TPM3-208ENST00000341485 PRDM15P57071 1507 aaPredicted RBP20.98■□□□□ 0.95
TPM3-208ENST00000341485 CCDC144AA2RUR9 1427 aa20.95■□□□□ 0.94
TPM3-208ENST00000341485 ZMYM4Q5VZL5 1548 aa20.95■□□□□ 0.94
TPM3-208ENST00000341485 MROH1Q8NDA8 1641 aa20.95■□□□□ 0.94
TPM3-208ENST00000341485 VWDEQ8N2E2 1590 aa20.95■□□□□ 0.94
TPM3-208ENST00000341485 TET3O43151 1660 aa20.94■□□□□ 0.94
TPM3-208ENST00000341485 RNF17Q9BXT8 1623 aaKnown RBP20.94■□□□□ 0.94
TPM3-208ENST00000341485 E9PCH4 1651 aa20.93■□□□□ 0.94
TPM3-208ENST00000341485 YEATS2Q9ULM3 1422 aa20.92■□□□□ 0.94
TPM3-208ENST00000341485 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
TPM3-208ENST00000341485 PLA2R1Q13018 1463 aa20.91■□□□□ 0.94
TPM3-208ENST00000341485 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
TPM3-208ENST00000341485 GGT6Q6P531 493 aa20.9■□□□□ 0.94
TPM3-208ENST00000341485 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
TPM3-208ENST00000341485 ATP10AO60312 1499 aa20.89■□□□□ 0.93
TPM3-208ENST00000341485 CCDC7Q96M83 1385 aa20.89■□□□□ 0.93
TPM3-208ENST00000341485 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.93
TPM3-208ENST00000341485 CEP152O94986 1710 aa20.87■□□□□ 0.93
TPM3-208ENST00000341485 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
TPM3-208ENST00000341485 LMTK2Q8IWU2 1503 aa20.86■□□□□ 0.93
TPM3-208ENST00000341485 POLR1AO95602 1720 aaPredicted RBP20.86■□□□□ 0.93
TPM3-208ENST00000341485 EFCAB6Q5THR3 1501 aa20.85■□□□□ 0.93
TPM3-208ENST00000341485 TRPM2O94759 1503 aa20.84■□□□□ 0.93
TPM3-208ENST00000341485 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
TPM3-208ENST00000341485 COL17A1Q9UMD9 1497 aaPredicted RBP20.82■□□□□ 0.92
TPM3-208ENST00000341485 PTPRTO14522 1441 aa20.82■□□□□ 0.92
TPM3-208ENST00000341485 WASHC2CQ9Y4E1 1318 aa20.82■□□□□ 0.92
TPM3-208ENST00000341485 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
TPM3-208ENST00000341485 DCAF11Q8TEB1 546 aa20.81■□□□□ 0.92
TPM3-208ENST00000341485 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
TPM3-208ENST00000341485 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
TPM3-208ENST00000341485 KDM2AQ9Y2K7 1162 aa20.8■□□□□ 0.92
TPM3-208ENST00000341485 ABCC3O15438 1527 aa20.79■□□□□ 0.92
TPM3-208ENST00000341485 KIF7Q2M1P5 1343 aa20.79■□□□□ 0.92
TPM3-208ENST00000341485 REREQ9P2R6 1566 aa20.78■□□□□ 0.92
TPM3-208ENST00000341485 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.92
TPM3-208ENST00000341485 CLTCL1P53675 1640 aa20.77■□□□□ 0.92
TPM3-208ENST00000341485 ZC3H13Q5T200 1668 aaKnown RBP20.76■□□□□ 0.91
TPM3-208ENST00000341485 CAMSAP1Q5T5Y3 1602 aa20.76■□□□□ 0.91
TPM3-208ENST00000341485 ARHGEF40Q8TER5 1519 aa20.76■□□□□ 0.91
TPM3-208ENST00000341485 NPATQ14207 1427 aa20.74■□□□□ 0.91
TPM3-208ENST00000341485 AGLP35573 1532 aa20.73■□□□□ 0.91
TPM3-208ENST00000341485 USP47Q96K76 1375 aa20.73■□□□□ 0.91
TPM3-208ENST00000341485 FKBP8Q14318 412 aa20.73■□□□□ 0.91
TPM3-208ENST00000341485 PRKRIP1Q9H875 184 aaPredicted RBP20.73■□□□□ 0.91
TPM3-208ENST00000341485 RALGAPBQ86X10 1494 aa20.71■□□□□ 0.91
TPM3-208ENST00000341485 CCDC184Q52MB2 194 aa20.71■□□□□ 0.91
TPM3-208ENST00000341485 HNRNPUQ00839 825 aaKnown RBP eCLIP20.69■□□□□ 0.9
TPM3-208ENST00000341485 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
TPM3-208ENST00000341485 UGGT1Q9NYU2 1555 aa20.69■□□□□ 0.9
TPM3-208ENST00000341485 KIF1BO60333 1816 aa20.68■□□□□ 0.9
TPM3-208ENST00000341485 PRAG1Q86YV5 1406 aa20.68■□□□□ 0.9
TPM3-208ENST00000341485 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
TPM3-208ENST00000341485 SIGLEC1Q9BZZ2 1709 aa20.66■□□□□ 0.9
TPM3-208ENST00000341485 BCANQ96GW7 911 aa20.66■□□□□ 0.9
TPM3-208ENST00000341485 NEURL4Q96JN8 1562 aa20.65■□□□□ 0.9
TPM3-208ENST00000341485 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
TPM3-208ENST00000341485 NEFLP07196 543 aa20.64■□□□□ 0.89
TPM3-208ENST00000341485 MLECQ14165 292 aa20.64■□□□□ 0.89
TPM3-208ENST00000341485 CARD11Q9BXL7 1154 aa20.64■□□□□ 0.89
TPM3-208ENST00000341485 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.89
TPM3-208ENST00000341485 TRPM1Q7Z4N2 1603 aa20.63■□□□□ 0.89
TPM3-208ENST00000341485 NOS1P29475 1434 aa20.63■□□□□ 0.89
TPM3-208ENST00000341485 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
TPM3-208ENST00000341485 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
TPM3-208ENST00000341485 ARID4BQ4LE39 1312 aaPredicted RBP20.61■□□□□ 0.89
TPM3-208ENST00000341485 MROH2AA6NES4 1674 aa20.6■□□□□ 0.89
TPM3-208ENST00000341485 CLTCQ00610 1675 aaKnown RBP20.6■□□□□ 0.89
TPM3-208ENST00000341485 MRS2Q9HD23 443 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms