RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
TRAK1-202ENST00000341421 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
TRAK1-202ENST00000341421 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
TRAK1-202ENST00000341421 BECN1Q14457 450 aa15.17■□□□□ 0.02
TRAK1-202ENST00000341421 PANK3Q9H999 370 aa15.16■□□□□ 0.02
TRAK1-202ENST00000341421 RRP1P56182 461 aaKnown RBP15.15■□□□□ 0.02
TRAK1-202ENST00000341421 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
TRAK1-202ENST00000341421 HSP90AA1P07900 732 aaKnown RBP15.15■□□□□ 0.02
TRAK1-202ENST00000341421 WASHC2CQ9Y4E1 1318 aa15.14■□□□□ 0.01
TRAK1-202ENST00000341421 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
TRAK1-202ENST00000341421 KIF3BO15066 747 aa15.13■□□□□ 0.01
TRAK1-202ENST00000341421 GOLGA2Q08379 1002 aa15.13■□□□□ 0.01
TRAK1-202ENST00000341421 MS4A1P11836 297 aa15.13■□□□□ 0.01
TRAK1-202ENST00000341421 RSPH6AQ9H0K4 717 aa15.13■□□□□ 0.01
TRAK1-202ENST00000341421 SAMD9Q5K651 1589 aa15.13■□□□□ 0.01
TRAK1-202ENST00000341421 GSE1Q14687 1217 aa15.12■□□□□ 0.01
TRAK1-202ENST00000341421 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
TRAK1-202ENST00000341421 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
TRAK1-202ENST00000341421 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
TRAK1-202ENST00000341421 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
TRAK1-202ENST00000341421 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
TRAK1-202ENST00000341421 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 RGS3P49796 1198 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 WDR62O43379 1518 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 CCDC184Q52MB2 194 aa15.09■□□□□ 0.01
TRAK1-202ENST00000341421 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
TRAK1-202ENST00000341421 RAPGEF6Q8TEU7 1601 aa15.08■□□□□ 0.01
TRAK1-202ENST00000341421 KIF14Q15058 1648 aa15.08■□□□□ 0
TRAK1-202ENST00000341421 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
TRAK1-202ENST00000341421 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0
TRAK1-202ENST00000341421 NGEFQ8N5V2 710 aa15.08■□□□□ 0
TRAK1-202ENST00000341421 UBE2Q2Q8WVN8 375 aa15.08■□□□□ 0
TRAK1-202ENST00000341421 PNNQ9H307 717 aaKnown RBP15.08■□□□□ 0
TRAK1-202ENST00000341421 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
TRAK1-202ENST00000341421 PDE4AP27815 886 aa15.07■□□□□ 0
TRAK1-202ENST00000341421 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
TRAK1-202ENST00000341421 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
TRAK1-202ENST00000341421 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
TRAK1-202ENST00000341421 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
TRAK1-202ENST00000341421 TNNT2P45379 298 aaPredicted RBP15.05■□□□□ 0
TRAK1-202ENST00000341421 EXOC6Q8TAG9 804 aa15.05■□□□□ 0
TRAK1-202ENST00000341421 GPATCH8Q9UKJ3 1502 aaKnown RBP15.05■□□□□ -0
TRAK1-202ENST00000341421 POGKQ9P215 609 aa15.05■□□□□ -0
TRAK1-202ENST00000341421 ITSN2Q9NZM3 1697 aa15.05■□□□□ -0
TRAK1-202ENST00000341421 GGT6Q6P531 493 aa15.04■□□□□ -0
TRAK1-202ENST00000341421 NAP1L5Q96NT1 182 aaPredicted RBP15.04■□□□□ -0
TRAK1-202ENST00000341421 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
TRAK1-202ENST00000341421 ANP32BQ92688 251 aaKnown RBP15.04■□□□□ -0
TRAK1-202ENST00000341421 CHMP4BQ9H444 224 aaKnown RBP15.03■□□□□ -0
TRAK1-202ENST00000341421 ARHGEF11O15085 1522 aa15.03■□□□□ -0
TRAK1-202ENST00000341421 KIAA0556O60303 1618 aa15.03■□□□□ -0
TRAK1-202ENST00000341421 CENPQQ7L2Z9 268 aaPredicted RBP15.02□□□□□ -0.01
TRAK1-202ENST00000341421 BRPF3Q9ULD4 1205 aa15.01□□□□□ -0.01
TRAK1-202ENST00000341421 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
TRAK1-202ENST00000341421 E9PSI1 815 aa14.99□□□□□ -0.01
TRAK1-202ENST00000341421 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
TRAK1-202ENST00000341421 SRPK2P78362 688 aaKnown RBP14.99□□□□□ -0.01
TRAK1-202ENST00000341421 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
TRAK1-202ENST00000341421 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
TRAK1-202ENST00000341421 DNMT1P26358 1616 aaKnown RBP14.98□□□□□ -0.01
TRAK1-202ENST00000341421 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
TRAK1-202ENST00000341421 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
TRAK1-202ENST00000341421 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
TRAK1-202ENST00000341421 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
TRAK1-202ENST00000341421 CCDC146Q8IYE0 955 aa14.96□□□□□ -0.01
TRAK1-202ENST00000341421 PMFBP1Q8TBY8 1022 aa14.96□□□□□ -0.01
TRAK1-202ENST00000341421 ERBINQ96RT1 1412 aa14.96□□□□□ -0.01
TRAK1-202ENST00000341421 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.02
TRAK1-202ENST00000341421 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
TRAK1-202ENST00000341421 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRAK1-202ENST00000341421 NFKBIBQ15653 356 aa14.95□□□□□ -0.02
TRAK1-202ENST00000341421 PLIN1O60240 522 aa14.95□□□□□ -0.02
TRAK1-202ENST00000341421 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
TRAK1-202ENST00000341421 RWDD1Q9H446 243 aaPredicted RBP14.94□□□□□ -0.02
TRAK1-202ENST00000341421 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
TRAK1-202ENST00000341421 PKNOX2Q96KN3 472 aa14.93□□□□□ -0.02
TRAK1-202ENST00000341421 SHANK2Q9UPX8 1470 aa14.93□□□□□ -0.02
TRAK1-202ENST00000341421 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
TRAK1-202ENST00000341421 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 TRAK1Q9UPV9 953 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
TRAK1-202ENST00000341421 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
TRAK1-202ENST00000341421 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
TRAK1-202ENST00000341421 APAF1O14727 1248 aa14.91□□□□□ -0.02
TRAK1-202ENST00000341421 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
TRAK1-202ENST00000341421 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
TRAK1-202ENST00000341421 ATP10BO94823 1461 aa14.91□□□□□ -0.02
TRAK1-202ENST00000341421 ADGRL2O95490 1459 aa14.91□□□□□ -0.02
TRAK1-202ENST00000341421 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
TRAK1-202ENST00000341421 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
TRAK1-202ENST00000341421 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
TRAK1-202ENST00000341421 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
TRAK1-202ENST00000341421 FAM43AQ8N2R8 423 aa14.9□□□□□ -0.02
TRAK1-202ENST00000341421 TRIM44Q96DX7 344 aaPredicted RBP14.9□□□□□ -0.02
TRAK1-202ENST00000341421 CALD1Q05682 793 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms