RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
NECTIN1-203ENST00000341398 CEP170BQ9Y4F5 1589 aaPredicted RBP20.61■□□□□ 0.89
NECTIN1-203ENST00000341398 PLA2R1Q13018 1463 aa20.61■□□□□ 0.89
NECTIN1-203ENST00000341398 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
NECTIN1-203ENST00000341398 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
NECTIN1-203ENST00000341398 IQSEC2Q5JU85 1478 aa20.58■□□□□ 0.89
NECTIN1-203ENST00000341398 LTBP4Q8N2S1 1624 aa20.58■□□□□ 0.89
NECTIN1-203ENST00000341398 MAP3K1Q13233 1512 aa20.57■□□□□ 0.88
NECTIN1-203ENST00000341398 A2ML1A8K2U0 1454 aa20.57■□□□□ 0.88
NECTIN1-203ENST00000341398 APLP2Q06481 763 aa20.57■□□□□ 0.88
NECTIN1-203ENST00000341398 KDM5DQ9BY66 1539 aa20.56■□□□□ 0.88
NECTIN1-203ENST00000341398 TNRQ92752 1358 aa20.55■□□□□ 0.88
NECTIN1-203ENST00000341398 FBXO31Q5XUX0 539 aaPredicted RBP20.54■□□□□ 0.88
NECTIN1-203ENST00000341398 TCOF1Q13428 1488 aaKnown RBP20.54■□□□□ 0.88
NECTIN1-203ENST00000341398 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
NECTIN1-203ENST00000341398 PZPP20742 1482 aa20.53■□□□□ 0.88
NECTIN1-203ENST00000341398 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
NECTIN1-203ENST00000341398 DNMT1P26358 1616 aaKnown RBP20.52■□□□□ 0.88
NECTIN1-203ENST00000341398 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
NECTIN1-203ENST00000341398 THEMISQ8N1K5 641 aaPredicted RBP20.51■□□□□ 0.87
NECTIN1-203ENST00000341398 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
NECTIN1-203ENST00000341398 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
NECTIN1-203ENST00000341398 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
NECTIN1-203ENST00000341398 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
NECTIN1-203ENST00000341398 POLR1AO95602 1720 aaPredicted RBP20.46■□□□□ 0.87
NECTIN1-203ENST00000341398 UBAP1LF5GYI3 381 aa20.46■□□□□ 0.87
NECTIN1-203ENST00000341398 RNF17Q9BXT8 1623 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-203ENST00000341398 EIF2AK4Q9P2K8 1649 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-203ENST00000341398 ZC3H13Q5T200 1668 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-203ENST00000341398 UGGT1Q9NYU2 1555 aa20.43■□□□□ 0.86
NECTIN1-203ENST00000341398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
NECTIN1-203ENST00000341398 CFAP65Q6ZU64 1925 aaKnown RBP20.41■□□□□ 0.86
NECTIN1-203ENST00000341398 DUOX2Q9NRD8 1548 aa20.41■□□□□ 0.86
NECTIN1-203ENST00000341398 ABCC3O15438 1527 aa20.39■□□□□ 0.85
NECTIN1-203ENST00000341398 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
NECTIN1-203ENST00000341398 CPS1P31327 1500 aa20.37■□□□□ 0.85
NECTIN1-203ENST00000341398 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
NECTIN1-203ENST00000341398 KIF15Q9NS87 1388 aa20.36■□□□□ 0.85
NECTIN1-203ENST00000341398 NEURL4Q96JN8 1562 aa20.36■□□□□ 0.85
NECTIN1-203ENST00000341398 TOM1O60784 492 aa20.35■□□□□ 0.85
NECTIN1-203ENST00000341398 SHANK2Q9UPX8 1470 aa20.35■□□□□ 0.85
NECTIN1-203ENST00000341398 DEPDC5O75140 1603 aa20.35■□□□□ 0.85
NECTIN1-203ENST00000341398 CEP152O94986 1710 aa20.35■□□□□ 0.85
NECTIN1-203ENST00000341398 NPHP4O75161 1426 aaPredicted RBP20.34■□□□□ 0.85
NECTIN1-203ENST00000341398 ABCC5O15440 1437 aa20.34■□□□□ 0.85
NECTIN1-203ENST00000341398 MED14O60244 1454 aa20.34■□□□□ 0.85
NECTIN1-203ENST00000341398 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
NECTIN1-203ENST00000341398 CROCC2H7BZ55 1655 aa20.33■□□□□ 0.84
NECTIN1-203ENST00000341398 ERBINQ96RT1 1412 aa20.33■□□□□ 0.84
NECTIN1-203ENST00000341398 KANK1Q14678 1352 aa20.33■□□□□ 0.84
NECTIN1-203ENST00000341398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.33■□□□□ 0.84
NECTIN1-203ENST00000341398 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
NECTIN1-203ENST00000341398 MROH1Q8NDA8 1641 aa20.31■□□□□ 0.84
NECTIN1-203ENST00000341398 DAPK1P53355 1430 aa20.3■□□□□ 0.84
NECTIN1-203ENST00000341398 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
NECTIN1-203ENST00000341398 ANKRD30AQ9BXX3 1397 aa20.3■□□□□ 0.84
NECTIN1-203ENST00000341398 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
NECTIN1-203ENST00000341398 ARHGAP31Q2M1Z3 1444 aa20.29■□□□□ 0.84
NECTIN1-203ENST00000341398 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
NECTIN1-203ENST00000341398 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
NECTIN1-203ENST00000341398 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.83
NECTIN1-203ENST00000341398 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
NECTIN1-203ENST00000341398 EID1Q9Y6B2 187 aa20.26■□□□□ 0.83
NECTIN1-203ENST00000341398 UBR1Q8IWV7 1749 aa20.25■□□□□ 0.83
NECTIN1-203ENST00000341398 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
NECTIN1-203ENST00000341398 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
NECTIN1-203ENST00000341398 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
NECTIN1-203ENST00000341398 FAM50AQ14320 339 aaKnown RBP20.21■□□□□ 0.83
NECTIN1-203ENST00000341398 HSPA1LP34931 641 aa20.2■□□□□ 0.82
NECTIN1-203ENST00000341398 SLIT1O75093 1534 aa20.19■□□□□ 0.82
NECTIN1-203ENST00000341398 LTKP29376 864 aa20.18■□□□□ 0.82
NECTIN1-203ENST00000341398 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
NECTIN1-203ENST00000341398 LMTK2Q8IWU2 1503 aa20.16■□□□□ 0.82
NECTIN1-203ENST00000341398 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 PIK3C2BO00750 1634 aa20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 IDI1Q13907 227 aa20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 LRRC7Q96NW7 1537 aa20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 SYNMO15061 1565 aa20.15■□□□□ 0.82
NECTIN1-203ENST00000341398 ADGRL2O95490 1459 aa20.14■□□□□ 0.82
NECTIN1-203ENST00000341398 SLC52A1Q9NWF4 448 aa20.14■□□□□ 0.81
NECTIN1-203ENST00000341398 KDM5AP29375 1690 aaKnown RBP20.14■□□□□ 0.81
NECTIN1-203ENST00000341398 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
NECTIN1-203ENST00000341398 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
NECTIN1-203ENST00000341398 ANKRD50Q9ULJ7 1429 aa20.11■□□□□ 0.81
NECTIN1-203ENST00000341398 HDGFP51858 240 aaKnown RBP20.08■□□□□ 0.81
NECTIN1-203ENST00000341398 NOS1P29475 1434 aa20.08■□□□□ 0.8
NECTIN1-203ENST00000341398 BCANQ96GW7 911 aa20.08■□□□□ 0.8
NECTIN1-203ENST00000341398 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
NECTIN1-203ENST00000341398 KCNA6P17658 529 aa20.05■□□□□ 0.8
NECTIN1-203ENST00000341398 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
NECTIN1-203ENST00000341398 SLC26A8Q96RN1 970 aa20.03■□□□□ 0.8
NECTIN1-203ENST00000341398 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
NECTIN1-203ENST00000341398 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
NECTIN1-203ENST00000341398 ADGRB3O60242 1522 aa20.03■□□□□ 0.8
NECTIN1-203ENST00000341398 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
NECTIN1-203ENST00000341398 TET3O43151 1660 aa20.02■□□□□ 0.8
NECTIN1-203ENST00000341398 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
NECTIN1-203ENST00000341398 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
NECTIN1-203ENST00000341398 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms