RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 EFCAB2Q5VUJ9 269 aa27.75■■■□□ 2.03
SPG7-202ENST00000341316 ABCC1P33527 1531 aa27.72■■■□□ 2.03
SPG7-202ENST00000341316 DHX29Q7Z478 1369 aaKnown RBP27.72■■■□□ 2.03
SPG7-202ENST00000341316 DUOX2Q9NRD8 1548 aa27.72■■■□□ 2.03
SPG7-202ENST00000341316 TRAPPC8Q9Y2L5 1435 aa27.72■■■□□ 2.03
SPG7-202ENST00000341316 CCDC144AA2RUR9 1427 aa27.72■■■□□ 2.03
SPG7-202ENST00000341316 POLR3GLQ9BT43 218 aa27.72■■■□□ 2.03
SPG7-202ENST00000341316 NEFLP07196 543 aa27.71■■■□□ 2.03
SPG7-202ENST00000341316 IQGAP3Q86VI3 1631 aa27.71■■■□□ 2.03
SPG7-202ENST00000341316 MRS2Q9HD23 443 aa27.7■■■□□ 2.02
SPG7-202ENST00000341316 ERBINQ96RT1 1412 aa27.67■■■□□ 2.02
SPG7-202ENST00000341316 MAGI2Q86UL8 1455 aa27.67■■■□□ 2.02
SPG7-202ENST00000341316 ARID4BQ4LE39 1312 aaPredicted RBP27.67■■■□□ 2.02
SPG7-202ENST00000341316 ST20-MTHFSA0A0A6YYL1 179 aa27.66■■■□□ 2.02
SPG7-202ENST00000341316 FAM9BQ8IZU0 186 aa27.66■■■□□ 2.02
SPG7-202ENST00000341316 RGL3Q3MIN7 710 aa27.65■■■□□ 2.02
SPG7-202ENST00000341316 PRAG1Q86YV5 1406 aa27.64■■■□□ 2.02
SPG7-202ENST00000341316 ROCK2O75116 1388 aaKnown RBP27.63■■■□□ 2.01
SPG7-202ENST00000341316 A2MP01023 1474 aa27.61■■■□□ 2.01
SPG7-202ENST00000341316 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
SPG7-202ENST00000341316 CNGB1Q14028 1251 aaPredicted RBP27.6■■■□□ 2.01
SPG7-202ENST00000341316 TRPM1Q7Z4N2 1603 aa27.59■■■□□ 2.01
SPG7-202ENST00000341316 WDR7Q9Y4E6 1490 aa27.58■■■□□ 2.01
SPG7-202ENST00000341316 ARAP3Q8WWN8 1544 aa27.58■■■□□ 2.01
SPG7-202ENST00000341316 SPAG9O60271 1321 aaKnown RBP27.57■■■□□ 2
SPG7-202ENST00000341316 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
SPG7-202ENST00000341316 ATP10AO60312 1499 aa27.57■■■□□ 2
SPG7-202ENST00000341316 ZFYVE16Q7Z3T8 1539 aa27.54■■■□□ 2
SPG7-202ENST00000341316 RTEL1-TNFRSF6BF6WH68 1400 aa27.52■■■□□ 2
SPG7-202ENST00000341316 ANP32EQ9BTT0 268 aa27.51■■□□□ 1.99
SPG7-202ENST00000341316 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
SPG7-202ENST00000341316 FANCAO15360 1455 aa27.49■■□□□ 1.99
SPG7-202ENST00000341316 ABCA9Q8IUA7 1624 aa27.48■■□□□ 1.99
SPG7-202ENST00000341316 ZBED9Q6R2W3 1325 aa27.48■■□□□ 1.99
SPG7-202ENST00000341316 E9PCH4 1651 aa27.45■■□□□ 1.98
SPG7-202ENST00000341316 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
SPG7-202ENST00000341316 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
SPG7-202ENST00000341316 IRX6P78412 446 aaPredicted RBP27.42■■□□□ 1.98
SPG7-202ENST00000341316 RBM19Q9Y4C8 960 aaKnown RBP27.42■■□□□ 1.98
SPG7-202ENST00000341316 INO80Q9ULG1 1556 aaPredicted RBP27.42■■□□□ 1.98
SPG7-202ENST00000341316 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
SPG7-202ENST00000341316 LAMC1P11047 1609 aa27.41■■□□□ 1.98
SPG7-202ENST00000341316 DEPDC5O75140 1603 aa27.4■■□□□ 1.98
SPG7-202ENST00000341316 SCAPERQ9BY12 1400 aa27.39■■□□□ 1.98
SPG7-202ENST00000341316 ADGRL1O94910 1474 aa27.39■■□□□ 1.98
SPG7-202ENST00000341316 EIF2AK4Q9P2K8 1649 aaKnown RBP27.39■■□□□ 1.97
SPG7-202ENST00000341316 TESK2Q96S53 571 aa27.38■■□□□ 1.97
SPG7-202ENST00000341316 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
SPG7-202ENST00000341316 TRPM2O94759 1503 aa27.35■■□□□ 1.97
SPG7-202ENST00000341316 DISP3Q9P2K9 1392 aa27.35■■□□□ 1.97
SPG7-202ENST00000341316 PTPRTO14522 1441 aa27.35■■□□□ 1.97
SPG7-202ENST00000341316 COL17A1Q9UMD9 1497 aaPredicted RBP27.34■■□□□ 1.97
SPG7-202ENST00000341316 KIF3BO15066 747 aa27.32■■□□□ 1.96
SPG7-202ENST00000341316 TMC1Q8TDI8 760 aa27.32■■□□□ 1.96
SPG7-202ENST00000341316 MYT1LQ9UL68 1186 aa27.32■■□□□ 1.96
SPG7-202ENST00000341316 VWDEQ8N2E2 1590 aa27.32■■□□□ 1.96
SPG7-202ENST00000341316 RNF17Q9BXT8 1623 aaKnown RBP27.31■■□□□ 1.96
SPG7-202ENST00000341316 SPHKAPQ2M3C7 1700 aa27.31■■□□□ 1.96
SPG7-202ENST00000341316 CLTCL1P53675 1640 aa27.31■■□□□ 1.96
SPG7-202ENST00000341316 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
SPG7-202ENST00000341316 TET3O43151 1660 aa27.3■■□□□ 1.96
SPG7-202ENST00000341316 RALBP1Q15311 655 aa27.3■■□□□ 1.96
SPG7-202ENST00000341316 MYBBP1AQ9BQG0 1328 aaKnown RBP27.3■■□□□ 1.96
SPG7-202ENST00000341316 PER1O15534 1290 aaPredicted RBP27.29■■□□□ 1.96
SPG7-202ENST00000341316 MADDQ8WXG6 1647 aa27.29■■□□□ 1.96
SPG7-202ENST00000341316 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
SPG7-202ENST00000341316 SENP3-EIF4A1A0A087X0R7 540 aa27.27■■□□□ 1.96
SPG7-202ENST00000341316 CEP152O94986 1710 aa27.27■■□□□ 1.96
SPG7-202ENST00000341316 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
SPG7-202ENST00000341316 KANK1Q14678 1352 aa27.26■■□□□ 1.95
SPG7-202ENST00000341316 BRD4O60885 1362 aaPredicted RBP27.26■■□□□ 1.95
SPG7-202ENST00000341316 LRPPRCP42704 1394 aaKnown RBP27.24■■□□□ 1.95
SPG7-202ENST00000341316 PARD3Q8TEW0 1356 aa27.24■■□□□ 1.95
SPG7-202ENST00000341316 KIDINS220Q9ULH0 1771 aa27.23■■□□□ 1.95
SPG7-202ENST00000341316 SMG6Q86US8 1419 aaKnown RBP27.21■■□□□ 1.95
SPG7-202ENST00000341316 TMF1P82094 1093 aa27.21■■□□□ 1.95
SPG7-202ENST00000341316 NPM1P06748 294 aaKnown RBP eCLIP27.2■■□□□ 1.95
SPG7-202ENST00000341316 PANK3Q9H999 370 aa27.19■■□□□ 1.94
SPG7-202ENST00000341316 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
SPG7-202ENST00000341316 IQGAP1P46940 1657 aa27.17■■□□□ 1.94
SPG7-202ENST00000341316 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
SPG7-202ENST00000341316 ERICH6BQ5W0A0 696 aa27.17■■□□□ 1.94
SPG7-202ENST00000341316 NLRP13Q86W25 1043 aa27.15■■□□□ 1.94
SPG7-202ENST00000341316 CD109Q6YHK3 1445 aa27.15■■□□□ 1.94
SPG7-202ENST00000341316 NUDCQ9Y266 331 aa27.15■■□□□ 1.94
SPG7-202ENST00000341316 CC2D1BQ5T0F9 858 aaKnown RBP27.14■■□□□ 1.93
SPG7-202ENST00000341316 STAC3Q96MF2 364 aa27.14■■□□□ 1.93
SPG7-202ENST00000341316 EFCAB6Q5THR3 1501 aa27.13■■□□□ 1.93
SPG7-202ENST00000341316 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
SPG7-202ENST00000341316 PPP4R2Q9NY27 417 aa27.11■■□□□ 1.93
SPG7-202ENST00000341316 WASHC2CQ9Y4E1 1318 aa27.11■■□□□ 1.93
SPG7-202ENST00000341316 PPRC1Q5VV67 1664 aaKnown RBP27.11■■□□□ 1.93
SPG7-202ENST00000341316 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
SPG7-202ENST00000341316 NEURL4Q96JN8 1562 aa27.09■■□□□ 1.93
SPG7-202ENST00000341316 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
SPG7-202ENST00000341316 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
SPG7-202ENST00000341316 MSH5O43196 834 aa27.05■■□□□ 1.92
SPG7-202ENST00000341316 ADGRF5Q8IZF2 1346 aa27.05■■□□□ 1.92
SPG7-202ENST00000341316 RNF123Q5XPI4 1314 aa27.04■■□□□ 1.92
SPG7-202ENST00000341316 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms