RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 PLEKHG5O94827 1062 aa18.72■□□□□ 0.59
RRP1B-201ENST00000340648 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
RRP1B-201ENST00000340648 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
RRP1B-201ENST00000340648 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.59
RRP1B-201ENST00000340648 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
RRP1B-201ENST00000340648 E9PSI1 815 aa18.7■□□□□ 0.58
RRP1B-201ENST00000340648 ARID3AQ99856 593 aa18.69■□□□□ 0.58
RRP1B-201ENST00000340648 STK26Q9P289 416 aa18.69■□□□□ 0.58
RRP1B-201ENST00000340648 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
RRP1B-201ENST00000340648 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
RRP1B-201ENST00000340648 PTMSP20962 102 aa18.68■□□□□ 0.58
RRP1B-201ENST00000340648 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
RRP1B-201ENST00000340648 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
RRP1B-201ENST00000340648 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
RRP1B-201ENST00000340648 CFTRP13569 1480 aa18.67■□□□□ 0.58
RRP1B-201ENST00000340648 BRPF3Q9ULD4 1205 aa18.67■□□□□ 0.58
RRP1B-201ENST00000340648 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
RRP1B-201ENST00000340648 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
RRP1B-201ENST00000340648 GGT6Q6P531 493 aa18.65■□□□□ 0.58
RRP1B-201ENST00000340648 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
RRP1B-201ENST00000340648 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
RRP1B-201ENST00000340648 BACH2Q9BYV9 841 aa18.63■□□□□ 0.57
RRP1B-201ENST00000340648 DDX11L8A8MPP1 907 aa18.62■□□□□ 0.57
RRP1B-201ENST00000340648 MCCP23508 829 aa18.62■□□□□ 0.57
RRP1B-201ENST00000340648 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
RRP1B-201ENST00000340648 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
RRP1B-201ENST00000340648 KIF3BO15066 747 aa18.61■□□□□ 0.57
RRP1B-201ENST00000340648 SOX12O15370 315 aa18.61■□□□□ 0.57
RRP1B-201ENST00000340648 HSP90AA2PQ14568 343 aaPredicted RBP18.61■□□□□ 0.57
RRP1B-201ENST00000340648 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
RRP1B-201ENST00000340648 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
RRP1B-201ENST00000340648 OS9Q13438 667 aaPredicted RBP18.6■□□□□ 0.57
RRP1B-201ENST00000340648 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
RRP1B-201ENST00000340648 CALD1Q05682 793 aaKnown RBP18.6■□□□□ 0.57
RRP1B-201ENST00000340648 JPH4Q96JJ6 628 aa18.59■□□□□ 0.57
RRP1B-201ENST00000340648 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
RRP1B-201ENST00000340648 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
RRP1B-201ENST00000340648 KCNJ4P48050 445 aa18.59■□□□□ 0.57
RRP1B-201ENST00000340648 HDGFL2Q7Z4V5 671 aaPredicted RBP18.59■□□□□ 0.57
RRP1B-201ENST00000340648 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
RRP1B-201ENST00000340648 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
RRP1B-201ENST00000340648 ZKSCAN2Q63HK3 967 aa18.58■□□□□ 0.56
RRP1B-201ENST00000340648 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
RRP1B-201ENST00000340648 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
RRP1B-201ENST00000340648 NUTM2DQ5VT03 806 aaPredicted RBP18.56■□□□□ 0.56
RRP1B-201ENST00000340648 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
RRP1B-201ENST00000340648 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
RRP1B-201ENST00000340648 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
RRP1B-201ENST00000340648 NAIPQ13075 1403 aa18.55■□□□□ 0.56
RRP1B-201ENST00000340648 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
RRP1B-201ENST00000340648 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
RRP1B-201ENST00000340648 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
RRP1B-201ENST00000340648 HAP1P54257 671 aaPredicted RBP18.53■□□□□ 0.56
RRP1B-201ENST00000340648 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
RRP1B-201ENST00000340648 CHMP5Q9NZZ3 219 aa18.53■□□□□ 0.56
RRP1B-201ENST00000340648 FOXD4L5Q5VV16 416 aaPredicted RBP18.52■□□□□ 0.56
RRP1B-201ENST00000340648 NOL8Q76FK4 1167 aaKnown RBP18.52■□□□□ 0.56
RRP1B-201ENST00000340648 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
RRP1B-201ENST00000340648 FOXD4L4Q8WXT5 416 aaPredicted RBP18.52■□□□□ 0.56
RRP1B-201ENST00000340648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.51■□□□□ 0.55
RRP1B-201ENST00000340648 FGD1P98174 961 aa18.51■□□□□ 0.55
RRP1B-201ENST00000340648 DRC7Q8IY82 874 aa18.51■□□□□ 0.55
RRP1B-201ENST00000340648 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
RRP1B-201ENST00000340648 EFCAB5A4FU69 1503 aa18.5■□□□□ 0.55
RRP1B-201ENST00000340648 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
RRP1B-201ENST00000340648 NBPF1Q3BBV0 1214 aa18.49■□□□□ 0.55
RRP1B-201ENST00000340648 SYAP1Q96A49 352 aaPredicted RBP18.49■□□□□ 0.55
RRP1B-201ENST00000340648 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
RRP1B-201ENST00000340648 SKAP1Q86WV1 359 aa18.48■□□□□ 0.55
RRP1B-201ENST00000340648 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
RRP1B-201ENST00000340648 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
RRP1B-201ENST00000340648 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
RRP1B-201ENST00000340648 SKOR2Q2VWA4 1001 aaPredicted RBP18.47■□□□□ 0.55
RRP1B-201ENST00000340648 NAP1L2Q9ULW6 460 aaPredicted RBP18.47■□□□□ 0.55
RRP1B-201ENST00000340648 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
RRP1B-201ENST00000340648 MAPKBP1O60336 1514 aa18.46■□□□□ 0.55
RRP1B-201ENST00000340648 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
RRP1B-201ENST00000340648 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
RRP1B-201ENST00000340648 ST18O60284 1047 aa18.46■□□□□ 0.54
RRP1B-201ENST00000340648 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
RRP1B-201ENST00000340648 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
RRP1B-201ENST00000340648 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
RRP1B-201ENST00000340648 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
RRP1B-201ENST00000340648 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
RRP1B-201ENST00000340648 GOLGA6L6A8MZA4 724 aa18.44■□□□□ 0.54
RRP1B-201ENST00000340648 BCAR3O75815 825 aa18.44■□□□□ 0.54
RRP1B-201ENST00000340648 SLC4A10Q6U841 1118 aa18.44■□□□□ 0.54
RRP1B-201ENST00000340648 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
RRP1B-201ENST00000340648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
RRP1B-201ENST00000340648 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
RRP1B-201ENST00000340648 LNPKQ9C0E8 428 aa18.42■□□□□ 0.54
RRP1B-201ENST00000340648 HMMRO75330 724 aa18.41■□□□□ 0.54
RRP1B-201ENST00000340648 FOXD4L6Q3SYB3 417 aaPredicted RBP18.4■□□□□ 0.54
RRP1B-201ENST00000340648 FOXD4L3Q6VB84 417 aaPredicted RBP18.4■□□□□ 0.54
RRP1B-201ENST00000340648 MLECQ14165 292 aa18.39■□□□□ 0.53
RRP1B-201ENST00000340648 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.532e-7■■■■□ 20.6
RRP1B-201ENST00000340648 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
RRP1B-201ENST00000340648 PDZRN3Q9UPQ7 1066 aa18.38■□□□□ 0.53
RRP1B-201ENST00000340648 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
RRP1B-201ENST00000340648 NRDCO43847 1150 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms