RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
NUP43-201ENST00000340413 KCNH8Q96L42 1107 aa10.56□□□□□ -0.72
NUP43-201ENST00000340413 A2MP01023 1474 aa10.56□□□□□ -0.72
NUP43-201ENST00000340413 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
NUP43-201ENST00000340413 PPP6R1Q9UPN7 881 aa10.53□□□□□ -0.72
NUP43-201ENST00000340413 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
NUP43-201ENST00000340413 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.72
NUP43-201ENST00000340413 EFCAB6Q5THR3 1501 aa10.52□□□□□ -0.73
NUP43-201ENST00000340413 SPHKAPQ2M3C7 1700 aa10.52□□□□□ -0.73
NUP43-201ENST00000340413 TRPM2O94759 1503 aa10.51□□□□□ -0.73
NUP43-201ENST00000340413 ANKRD30BQ9BXX2 1392 aa10.51□□□□□ -0.73
NUP43-201ENST00000340413 ARHGAP31Q2M1Z3 1444 aa10.51□□□□□ -0.73
NUP43-201ENST00000340413 MROH2AA6NES4 1674 aa10.51□□□□□ -0.73
NUP43-201ENST00000340413 CEP152O94986 1710 aa10.51□□□□□ -0.73
NUP43-201ENST00000340413 KANK1Q14678 1352 aa10.5□□□□□ -0.73
NUP43-201ENST00000340413 PTPRTO14522 1441 aa10.5□□□□□ -0.73
NUP43-201ENST00000340413 E9PCH4 1651 aa10.5□□□□□ -0.73
NUP43-201ENST00000340413 ITGAEP38570 1179 aa10.49□□□□□ -0.73
NUP43-201ENST00000340413 CAMSAP1Q5T5Y3 1602 aa10.49□□□□□ -0.73
NUP43-201ENST00000340413 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
NUP43-201ENST00000340413 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
NUP43-201ENST00000340413 LAMC1P11047 1609 aa10.48□□□□□ -0.73
NUP43-201ENST00000340413 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
NUP43-201ENST00000340413 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
NUP43-201ENST00000340413 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
NUP43-201ENST00000340413 KDM5AP29375 1690 aaKnown RBP10.47□□□□□ -0.73
NUP43-201ENST00000340413 ABCC3O15438 1527 aa10.46□□□□□ -0.73
NUP43-201ENST00000340413 CHIC2Q9UKJ5 165 aa10.46□□□□□ -0.73
NUP43-201ENST00000340413 PIK3C2BO00750 1634 aa10.45□□□□□ -0.74
NUP43-201ENST00000340413 NUP155O75694 1391 aa10.45□□□□□ -0.74
NUP43-201ENST00000340413 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
NUP43-201ENST00000340413 KIAA1210Q9ULL0 1709 aa10.45□□□□□ -0.74
NUP43-201ENST00000340413 CNTLNQ9NXG0 1405 aa10.44□□□□□ -0.74
NUP43-201ENST00000340413 IFT172Q9UG01 1749 aa10.43□□□□□ -0.74
NUP43-201ENST00000340413 AFAP1Q8N556 730 aa10.42□□□□□ -0.74
NUP43-201ENST00000340413 KIF1BO60333 1816 aa10.41□□□□□ -0.74
NUP43-201ENST00000340413 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
NUP43-201ENST00000340413 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
NUP43-201ENST00000340413 NOS1P29475 1434 aa10.4□□□□□ -0.75
NUP43-201ENST00000340413 PREX1Q8TCU6 1659 aa10.39□□□□□ -0.75
NUP43-201ENST00000340413 POLR1AO95602 1720 aaPredicted RBP10.39□□□□□ -0.75
NUP43-201ENST00000340413 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
NUP43-201ENST00000340413 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
NUP43-201ENST00000340413 MYOM2P54296 1465 aa10.39□□□□□ -0.75
NUP43-201ENST00000340413 PLA2R1Q13018 1463 aa10.39□□□□□ -0.75
NUP43-201ENST00000340413 ADGRB3O60242 1522 aa10.38□□□□□ -0.75
NUP43-201ENST00000340413 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
NUP43-201ENST00000340413 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
NUP43-201ENST00000340413 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
NUP43-201ENST00000340413 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
NUP43-201ENST00000340413 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
NUP43-201ENST00000340413 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
NUP43-201ENST00000340413 PKD2Q13563 968 aa10.36□□□□□ -0.75
NUP43-201ENST00000340413 PPP1R15AO75807 674 aaPredicted RBP10.35□□□□□ -0.75
NUP43-201ENST00000340413 TRPM1Q7Z4N2 1603 aa10.35□□□□□ -0.75
NUP43-201ENST00000340413 SIGLEC1Q9BZZ2 1709 aa10.35□□□□□ -0.75
NUP43-201ENST00000340413 NRXN1Q9ULB1 1477 aa10.35□□□□□ -0.75
NUP43-201ENST00000340413 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
NUP43-201ENST00000340413 PPLO60437 1756 aa10.34□□□□□ -0.75
NUP43-201ENST00000340413 SYNMO15061 1565 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 UGGT1Q9NYU2 1555 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 NPATQ14207 1427 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 SETBP1Q9Y6X0 1596 aa10.33□□□□□ -0.76
NUP43-201ENST00000340413 RPGRIP1LQ68CZ1 1315 aa10.32□□□□□ -0.76
NUP43-201ENST00000340413 ERVK-7P63135 1459 aa10.32□□□□□ -0.76
NUP43-201ENST00000340413 KIF3BO15066 747 aa10.32□□□□□ -0.76
NUP43-201ENST00000340413 GPRASP1Q5JY77 1395 aa10.31□□□□□ -0.76
NUP43-201ENST00000340413 RAPGEF3O95398 923 aa10.31□□□□□ -0.76
NUP43-201ENST00000340413 FER1L4A9Z1Z3 1794 aa10.3□□□□□ -0.76
NUP43-201ENST00000340413 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
NUP43-201ENST00000340413 TMEM131LA2VDJ0 1609 aa10.3□□□□□ -0.76
NUP43-201ENST00000340413 ADAMTSL3P82987 1691 aa10.29□□□□□ -0.76
NUP43-201ENST00000340413 PRAG1Q86YV5 1406 aa10.29□□□□□ -0.76
NUP43-201ENST00000340413 MYO3AQ8NEV4 1616 aa10.29□□□□□ -0.76
NUP43-201ENST00000340413 IQGAP1P46940 1657 aa10.28□□□□□ -0.76
NUP43-201ENST00000340413 SLC52A1Q9NWF4 448 aa10.28□□□□□ -0.76
NUP43-201ENST00000340413 NLRP1Q9C000 1473 aa10.28□□□□□ -0.76
NUP43-201ENST00000340413 ZNF142P52746 1687 aaPredicted RBP10.27□□□□□ -0.76
NUP43-201ENST00000340413 ARID4BQ4LE39 1312 aaPredicted RBP10.27□□□□□ -0.77
NUP43-201ENST00000340413 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
NUP43-201ENST00000340413 NEXMIFQ5QGS0 1516 aa10.26□□□□□ -0.77
NUP43-201ENST00000340413 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
NUP43-201ENST00000340413 C3P01024 1663 aa10.25□□□□□ -0.77
NUP43-201ENST00000340413 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
NUP43-201ENST00000340413 WASHC2CQ9Y4E1 1318 aa10.25□□□□□ -0.77
NUP43-201ENST00000340413 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
NUP43-201ENST00000340413 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
NUP43-201ENST00000340413 UBR1Q8IWV7 1749 aa10.22□□□□□ -0.77
NUP43-201ENST00000340413 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
NUP43-201ENST00000340413 DIP2AQ14689 1571 aa10.21□□□□□ -0.77
NUP43-201ENST00000340413 KNDC1Q76NI1 1749 aa10.21□□□□□ -0.77
NUP43-201ENST00000340413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.782e-7■□□□□ 8
NUP43-201ENST00000340413 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
NUP43-201ENST00000340413 SLIT1O75093 1534 aa10.2□□□□□ -0.78
NUP43-201ENST00000340413 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
NUP43-201ENST00000340413 SETD1AO15047 1707 aaKnown RBP10.19□□□□□ -0.78
NUP43-201ENST00000340413 DLC1Q96QB1 1528 aa10.19□□□□□ -0.78
NUP43-201ENST00000340413 ZMYM3Q14202 1370 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms