RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PPP1R15AO75807 674 aaPredicted RBP30.65■■■□□ 2.5
VRK2-201ENST00000340157 EIF2AK4Q9P2K8 1649 aaKnown RBP30.65■■■□□ 2.5
VRK2-201ENST00000340157 ZNF316A6NFI3 1004 aaPredicted RBP30.63■■■□□ 2.49
VRK2-201ENST00000340157 FRMPD1Q5SYB0 1578 aa30.62■■■□□ 2.49
VRK2-201ENST00000340157 DHX29Q7Z478 1369 aaKnown RBP30.62■■■□□ 2.49
VRK2-201ENST00000340157 ABCA6Q8N139 1617 aa30.61■■■□□ 2.49
VRK2-201ENST00000340157 RAPGEF3O95398 923 aa30.61■■■□□ 2.49
VRK2-201ENST00000340157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.61■■■□□ 2.499e-6■□□□□ 10.7
VRK2-201ENST00000340157 MYT1LQ9UL68 1186 aa30.6■■■□□ 2.49
VRK2-201ENST00000340157 MROH1Q8NDA8 1641 aa30.58■■■□□ 2.49
VRK2-201ENST00000340157 TEX14Q8IWB6 1497 aa30.57■■■□□ 2.48
VRK2-201ENST00000340157 A2MP01023 1474 aa30.55■■■□□ 2.48
VRK2-201ENST00000340157 VWDEQ8N2E2 1590 aa30.55■■■□□ 2.48
VRK2-201ENST00000340157 PRDM15P57071 1507 aaPredicted RBP30.53■■■□□ 2.48
VRK2-201ENST00000340157 DIP2CQ9Y2E4 1556 aa30.52■■■□□ 2.48
VRK2-201ENST00000340157 L3MBTL2Q969R5 705 aa30.5■■■□□ 2.47
VRK2-201ENST00000340157 RNF17Q9BXT8 1623 aaKnown RBP30.5■■■□□ 2.47
VRK2-201ENST00000340157 KIF3BO15066 747 aa30.49■■■□□ 2.47
VRK2-201ENST00000340157 ZMYM4Q5VZL5 1548 aa30.49■■■□□ 2.47
VRK2-201ENST00000340157 PLA2R1Q13018 1463 aa30.49■■■□□ 2.47
VRK2-201ENST00000340157 BCORL1Q5H9F3 1711 aa30.49■■■□□ 2.47
VRK2-201ENST00000340157 E9PCH4 1651 aa30.49■■■□□ 2.47
VRK2-201ENST00000340157 TET3O43151 1660 aa30.46■■■□□ 2.47
VRK2-201ENST00000340157 YEATS2Q9ULM3 1422 aa30.45■■■□□ 2.46
VRK2-201ENST00000340157 ATP10AO60312 1499 aa30.41■■■□□ 2.46
VRK2-201ENST00000340157 CEP152O94986 1710 aa30.38■■■□□ 2.45
VRK2-201ENST00000340157 KANK1Q14678 1352 aa30.37■■■□□ 2.45
VRK2-201ENST00000340157 COL17A1Q9UMD9 1497 aaPredicted RBP30.37■■■□□ 2.45
VRK2-201ENST00000340157 SPHKAPQ2M3C7 1700 aa30.35■■■□□ 2.45
VRK2-201ENST00000340157 CCDC144AA2RUR9 1427 aa30.34■■■□□ 2.45
VRK2-201ENST00000340157 LMTK2Q8IWU2 1503 aa30.34■■■□□ 2.45
VRK2-201ENST00000340157 EFCAB6Q5THR3 1501 aa30.33■■■□□ 2.45
VRK2-201ENST00000340157 DIEXFQ68CQ4 756 aaKnown RBP30.31■■■□□ 2.44
VRK2-201ENST00000340157 NBPF8Q3BBV2 869 aa30.31■■■□□ 2.44
VRK2-201ENST00000340157 TRPM2O94759 1503 aa30.3■■■□□ 2.44
VRK2-201ENST00000340157 PTPRTO14522 1441 aa30.29■■■□□ 2.44
VRK2-201ENST00000340157 ABCC3O15438 1527 aa30.25■■■□□ 2.43
VRK2-201ENST00000340157 REREQ9P2R6 1566 aa30.24■■■□□ 2.43
VRK2-201ENST00000340157 CLTCL1P53675 1640 aa30.24■■■□□ 2.43
VRK2-201ENST00000340157 GGT6Q6P531 493 aa30.23■■■□□ 2.43
VRK2-201ENST00000340157 SIGLEC1Q9BZZ2 1709 aa30.23■■■□□ 2.43
VRK2-201ENST00000340157 DNAJC5Q9H3Z4 198 aa30.21■■■□□ 2.43
VRK2-201ENST00000340157 UHRF1BP1Q6BDS2 1440 aa30.21■■■□□ 2.43
VRK2-201ENST00000340157 ARHGEF40Q8TER5 1519 aa30.2■■■□□ 2.43
VRK2-201ENST00000340157 CAMSAP1Q5T5Y3 1602 aa30.19■■■□□ 2.42
VRK2-201ENST00000340157 HIRIP3Q9BW71 556 aaPredicted RBP30.17■■■□□ 2.42
VRK2-201ENST00000340157 ZC3H13Q5T200 1668 aaKnown RBP30.17■■■□□ 2.42
VRK2-201ENST00000340157 SPATA31E1Q6ZUB1 1445 aa30.17■■■□□ 2.42
VRK2-201ENST00000340157 NPATQ14207 1427 aa30.16■■■□□ 2.42
VRK2-201ENST00000340157 AGLP35573 1532 aa30.15■■■□□ 2.42
VRK2-201ENST00000340157 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.42
VRK2-201ENST00000340157 UGGT1Q9NYU2 1555 aa30.13■■■□□ 2.41
VRK2-201ENST00000340157 WASHC2CQ9Y4E1 1318 aa30.12■■■□□ 2.41
VRK2-201ENST00000340157 DCAF11Q8TEB1 546 aa30.12■■■□□ 2.41
VRK2-201ENST00000340157 RGL3Q3MIN7 710 aa30.1■■■□□ 2.41
VRK2-201ENST00000340157 RALGAPBQ86X10 1494 aa30.08■■■□□ 2.41
VRK2-201ENST00000340157 ZNF326Q5BKZ1 582 aaKnown RBP30.08■■■□□ 2.41
VRK2-201ENST00000340157 KDM2AQ9Y2K7 1162 aa30.08■■■□□ 2.41
VRK2-201ENST00000340157 PRAG1Q86YV5 1406 aa30.06■■■□□ 2.4
VRK2-201ENST00000340157 HSPA5P11021 654 aaKnown RBP30.06■■■□□ 2.4
VRK2-201ENST00000340157 NEURL4Q96JN8 1562 aa30.06■■■□□ 2.4
VRK2-201ENST00000340157 KIF1BO60333 1816 aa30.05■■■□□ 2.4
VRK2-201ENST00000340157 TRPM1Q7Z4N2 1603 aa30.04■■■□□ 2.4
VRK2-201ENST00000340157 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
VRK2-201ENST00000340157 MROH2AA6NES4 1674 aa30.03■■■□□ 2.4
VRK2-201ENST00000340157 EIF4G2P78344 907 aaKnown RBP eCLIP30.02■■■□□ 2.4
VRK2-201ENST00000340157 TRHP20396 242 aaPredicted RBP30.02■■■□□ 2.4
VRK2-201ENST00000340157 NOS1P29475 1434 aa30.01■■■□□ 2.39
VRK2-201ENST00000340157 CNTLNQ9NXG0 1405 aa30■■■□□ 2.39
VRK2-201ENST00000340157 SYNMO15061 1565 aa30■■■□□ 2.39
VRK2-201ENST00000340157 PIK3C2BO00750 1634 aa29.97■■■□□ 2.39
VRK2-201ENST00000340157 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
VRK2-201ENST00000340157 CLTCQ00610 1675 aaKnown RBP29.95■■■□□ 2.39
VRK2-201ENST00000340157 PREX1Q8TCU6 1659 aa29.95■■■□□ 2.39
VRK2-201ENST00000340157 IFT172Q9UG01 1749 aa29.95■■■□□ 2.39
VRK2-201ENST00000340157 ADGRB3O60242 1522 aa29.95■■■□□ 2.39
VRK2-201ENST00000340157 USP47Q96K76 1375 aa29.91■■■□□ 2.38
VRK2-201ENST00000340157 MIER1Q8N108 512 aa29.9■■■□□ 2.38
VRK2-201ENST00000340157 PPP6R1Q9UPN7 881 aa29.89■■■□□ 2.38
VRK2-201ENST00000340157 POLR1AO95602 1720 aaPredicted RBP29.88■■■□□ 2.37
VRK2-201ENST00000340157 LAMC1P11047 1609 aa29.87■■■□□ 2.37
VRK2-201ENST00000340157 ROCK2O75116 1388 aaKnown RBP29.87■■■□□ 2.37
VRK2-201ENST00000340157 DDX10Q13206 875 aaKnown RBP29.87■■■□□ 2.37
VRK2-201ENST00000340157 GPRASP1Q5JY77 1395 aa29.86■■■□□ 2.37
VRK2-201ENST00000340157 CARD11Q9BXL7 1154 aa29.86■■■□□ 2.37
VRK2-201ENST00000340157 MLECQ14165 292 aa29.85■■■□□ 2.37
VRK2-201ENST00000340157 NBPF1Q3BBV0 1214 aa29.85■■■□□ 2.37
VRK2-201ENST00000340157 WASHC2AQ641Q2 1341 aa29.84■■■□□ 2.37
VRK2-201ENST00000340157 MYOM2P54296 1465 aa29.84■■■□□ 2.37
VRK2-201ENST00000340157 PPLO60437 1756 aa29.83■■■□□ 2.37
VRK2-201ENST00000340157 C11orf95C9JLR9 678 aaPredicted RBP29.83■■■□□ 2.37
VRK2-201ENST00000340157 ERVK-7P63135 1459 aa29.82■■■□□ 2.37
VRK2-201ENST00000340157 STAC3Q96MF2 364 aa29.81■■■□□ 2.36
VRK2-201ENST00000340157 MYO5BQ9ULV0 1848 aa29.79■■■□□ 2.36
VRK2-201ENST00000340157 FBXO31Q5XUX0 539 aaPredicted RBP29.78■■■□□ 2.36
VRK2-201ENST00000340157 KIAA1210Q9ULL0 1709 aa29.78■■■□□ 2.36
VRK2-201ENST00000340157 NRXN1Q9ULB1 1477 aa29.77■■■□□ 2.36
VRK2-201ENST00000340157 SPATA31D1Q6ZQQ2 1576 aa29.76■■■□□ 2.36
VRK2-201ENST00000340157 CCDC7Q96M83 1385 aa29.76■■■□□ 2.35
VRK2-201ENST00000340157 IDI1Q13907 227 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms