RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
DFFB-202ENST00000339350 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
DFFB-202ENST00000339350 PKD2Q13563 968 aa16.64■□□□□ 0.26
DFFB-202ENST00000339350 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.26
DFFB-202ENST00000339350 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
DFFB-202ENST00000339350 USP47Q96K76 1375 aa16.64■□□□□ 0.25
DFFB-202ENST00000339350 ARXQ96QS3 562 aa16.63■□□□□ 0.25
DFFB-202ENST00000339350 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
DFFB-202ENST00000339350 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
DFFB-202ENST00000339350 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
DFFB-202ENST00000339350 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.253e-6■■■■□ 21.2
DFFB-202ENST00000339350 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
DFFB-202ENST00000339350 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
DFFB-202ENST00000339350 KIF14Q15058 1648 aa16.61■□□□□ 0.25
DFFB-202ENST00000339350 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
DFFB-202ENST00000339350 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
DFFB-202ENST00000339350 NUP160Q12769 1436 aa16.59■□□□□ 0.25
DFFB-202ENST00000339350 DNMT1P26358 1616 aaKnown RBP16.58■□□□□ 0.25
DFFB-202ENST00000339350 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.25
DFFB-202ENST00000339350 PZPP20742 1482 aa16.58■□□□□ 0.24
DFFB-202ENST00000339350 ROCK1Q13464 1354 aa16.58■□□□□ 0.24
DFFB-202ENST00000339350 CARD11Q9BXL7 1154 aa16.57■□□□□ 0.24
DFFB-202ENST00000339350 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
DFFB-202ENST00000339350 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
DFFB-202ENST00000339350 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
DFFB-202ENST00000339350 CAMSAP2Q08AD1 1489 aa16.55■□□□□ 0.24
DFFB-202ENST00000339350 NAP1L2Q9ULW6 460 aaPredicted RBP16.55■□□□□ 0.24
DFFB-202ENST00000339350 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
DFFB-202ENST00000339350 RGS3P49796 1198 aa16.54■□□□□ 0.24
DFFB-202ENST00000339350 POLR1AO95602 1720 aaPredicted RBP16.54■□□□□ 0.24
DFFB-202ENST00000339350 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
DFFB-202ENST00000339350 PTPRGP23470 1445 aa16.53■□□□□ 0.24
DFFB-202ENST00000339350 ATP10BO94823 1461 aa16.53■□□□□ 0.24
DFFB-202ENST00000339350 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.23
DFFB-202ENST00000339350 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.23
DFFB-202ENST00000339350 CHD1O14646 1710 aa16.51■□□□□ 0.23
DFFB-202ENST00000339350 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
DFFB-202ENST00000339350 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
DFFB-202ENST00000339350 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
DFFB-202ENST00000339350 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
DFFB-202ENST00000339350 BBXQ8WY36 941 aaPredicted RBP16.5■□□□□ 0.23
DFFB-202ENST00000339350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
DFFB-202ENST00000339350 NUP155O75694 1391 aa16.5■□□□□ 0.23
DFFB-202ENST00000339350 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
DFFB-202ENST00000339350 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
DFFB-202ENST00000339350 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
DFFB-202ENST00000339350 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
DFFB-202ENST00000339350 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
DFFB-202ENST00000339350 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
DFFB-202ENST00000339350 KDM5CP41229 1560 aa16.47■□□□□ 0.23
DFFB-202ENST00000339350 RNF123Q5XPI4 1314 aa16.46■□□□□ 0.23
DFFB-202ENST00000339350 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
DFFB-202ENST00000339350 PLIN1O60240 522 aa16.45■□□□□ 0.22
DFFB-202ENST00000339350 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
DFFB-202ENST00000339350 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
DFFB-202ENST00000339350 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
DFFB-202ENST00000339350 RRP1P56182 461 aaKnown RBP16.43■□□□□ 0.22
DFFB-202ENST00000339350 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
DFFB-202ENST00000339350 KIF15Q9NS87 1388 aa16.42■□□□□ 0.22
DFFB-202ENST00000339350 PDE4AP27815 886 aa16.42■□□□□ 0.22
DFFB-202ENST00000339350 CALD1Q05682 793 aaKnown RBP16.42■□□□□ 0.22
DFFB-202ENST00000339350 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
DFFB-202ENST00000339350 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
DFFB-202ENST00000339350 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
DFFB-202ENST00000339350 ABCA8O94911 1581 aa16.4■□□□□ 0.22
DFFB-202ENST00000339350 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
DFFB-202ENST00000339350 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
DFFB-202ENST00000339350 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
DFFB-202ENST00000339350 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
DFFB-202ENST00000339350 ADGBQ8N7X0 1667 aa16.39■□□□□ 0.21
DFFB-202ENST00000339350 RSPH4AQ5TD94 716 aa16.38■□□□□ 0.21
DFFB-202ENST00000339350 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
DFFB-202ENST00000339350 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
DFFB-202ENST00000339350 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
DFFB-202ENST00000339350 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
DFFB-202ENST00000339350 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
DFFB-202ENST00000339350 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
DFFB-202ENST00000339350 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
DFFB-202ENST00000339350 RALBP1Q15311 655 aa16.35■□□□□ 0.21
DFFB-202ENST00000339350 BRD4O60885 1362 aaPredicted RBP16.34■□□□□ 0.21
DFFB-202ENST00000339350 CLCN1P35523 988 aa16.34■□□□□ 0.21
DFFB-202ENST00000339350 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
DFFB-202ENST00000339350 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.2
DFFB-202ENST00000339350 PDCL3Q9H2J4 239 aa16.33■□□□□ 0.2
DFFB-202ENST00000339350 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
DFFB-202ENST00000339350 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
DFFB-202ENST00000339350 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
DFFB-202ENST00000339350 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
DFFB-202ENST00000339350 KTN1Q86UP2 1357 aaKnown RBP16.31■□□□□ 0.2
DFFB-202ENST00000339350 TCERG1O14776 1098 aaKnown RBP16.31■□□□□ 0.2
DFFB-202ENST00000339350 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
DFFB-202ENST00000339350 CRBNQ96SW2 442 aa16.3■□□□□ 0.2
DFFB-202ENST00000339350 POGKQ9P215 609 aa16.29■□□□□ 0.2
DFFB-202ENST00000339350 CENPJQ9HC77 1338 aaPredicted RBP16.29■□□□□ 0.2
DFFB-202ENST00000339350 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
DFFB-202ENST00000339350 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
DFFB-202ENST00000339350 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
DFFB-202ENST00000339350 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
DFFB-202ENST00000339350 PANK3Q9H999 370 aa16.28■□□□□ 0.2
DFFB-202ENST00000339350 AFAP1Q8N556 730 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms