RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 FBXO31Q5XUX0 539 aaPredicted RBP30.5■■■□□ 2.47
ITGA4-202ENST00000339307 MYOM3Q5VTT5 1437 aa30.5■■■□□ 2.47
ITGA4-202ENST00000339307 KDM5DQ9BY66 1539 aa30.48■■■□□ 2.47
ITGA4-202ENST00000339307 ZNF142P52746 1687 aaPredicted RBP30.46■■■□□ 2.47
ITGA4-202ENST00000339307 MIA2Q96PC5 1412 aa30.46■■■□□ 2.47
ITGA4-202ENST00000339307 PKD2Q13563 968 aa30.46■■■□□ 2.47
ITGA4-202ENST00000339307 TNRQ92752 1358 aa30.44■■■□□ 2.46
ITGA4-202ENST00000339307 A2ML1A8K2U0 1454 aa30.41■■■□□ 2.46
ITGA4-202ENST00000339307 PLA2R1Q13018 1463 aa30.4■■■□□ 2.46
ITGA4-202ENST00000339307 MAST1Q9Y2H9 1570 aa30.4■■■□□ 2.46
ITGA4-202ENST00000339307 PZPP20742 1482 aa30.4■■■□□ 2.46
ITGA4-202ENST00000339307 FAM135AQ9P2D6 1515 aa30.38■■■□□ 2.45
ITGA4-202ENST00000339307 LTBP4Q8N2S1 1624 aa30.38■■■□□ 2.45
ITGA4-202ENST00000339307 ZNF335Q9H4Z2 1342 aaPredicted RBP30.38■■■□□ 2.45
ITGA4-202ENST00000339307 DNMT1P26358 1616 aaKnown RBP30.36■■■□□ 2.45
ITGA4-202ENST00000339307 TCOF1Q13428 1488 aaKnown RBP30.34■■■□□ 2.45
ITGA4-202ENST00000339307 RRP7BPQ9NSQ0 103 aa30.32■■■□□ 2.44
ITGA4-202ENST00000339307 PTPN23Q9H3S7 1636 aa30.31■■■□□ 2.44
ITGA4-202ENST00000339307 RNF17Q9BXT8 1623 aaKnown RBP30.3■■■□□ 2.44
ITGA4-202ENST00000339307 THEMISQ8N1K5 641 aaPredicted RBP30.29■■■□□ 2.44
ITGA4-202ENST00000339307 EIF2AK4Q9P2K8 1649 aaKnown RBP30.29■■■□□ 2.44
ITGA4-202ENST00000339307 DUOX2Q9NRD8 1548 aa30.28■■■□□ 2.44
ITGA4-202ENST00000339307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.27■■■□□ 2.44
ITGA4-202ENST00000339307 KIF15Q9NS87 1388 aa30.27■■■□□ 2.44
ITGA4-202ENST00000339307 ABCC3O15438 1527 aa30.27■■■□□ 2.44
ITGA4-202ENST00000339307 ABCC5O15440 1437 aa30.27■■■□□ 2.44
ITGA4-202ENST00000339307 ANKLE2Q86XL3 938 aa30.26■■■□□ 2.43
ITGA4-202ENST00000339307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.26■■■□□ 2.43
ITGA4-202ENST00000339307 CHIC2Q9UKJ5 165 aa30.25■■■□□ 2.43
ITGA4-202ENST00000339307 NLRP1Q9C000 1473 aa30.24■■■□□ 2.43
ITGA4-202ENST00000339307 ZC3H13Q5T200 1668 aaKnown RBP30.24■■■□□ 2.43
ITGA4-202ENST00000339307 FGD6Q6ZV73 1430 aa30.24■■■□□ 2.43
ITGA4-202ENST00000339307 IQSEC2Q5JU85 1478 aa30.23■■■□□ 2.43
ITGA4-202ENST00000339307 UGGT1Q9NYU2 1555 aa30.23■■■□□ 2.43
ITGA4-202ENST00000339307 DAPK1P53355 1430 aa30.22■■■□□ 2.43
ITGA4-202ENST00000339307 CROCC2H7BZ55 1655 aa30.21■■■□□ 2.43
ITGA4-202ENST00000339307 SHANK2Q9UPX8 1470 aa30.21■■■□□ 2.43
ITGA4-202ENST00000339307 POLR1AO95602 1720 aaPredicted RBP30.21■■■□□ 2.43
ITGA4-202ENST00000339307 UBAP1LF5GYI3 381 aa30.21■■■□□ 2.43
ITGA4-202ENST00000339307 CEP152O94986 1710 aa30.2■■■□□ 2.43
ITGA4-202ENST00000339307 CFAP65Q6ZU64 1925 aaKnown RBP30.19■■■□□ 2.42
ITGA4-202ENST00000339307 MROH1Q8NDA8 1641 aa30.19■■■□□ 2.42
ITGA4-202ENST00000339307 FAM50AQ14320 339 aaKnown RBP30.17■■■□□ 2.42
ITGA4-202ENST00000339307 ERBINQ96RT1 1412 aa30.16■■■□□ 2.42
ITGA4-202ENST00000339307 ERVK-7P63135 1459 aa30.16■■■□□ 2.42
ITGA4-202ENST00000339307 SPATA31D1Q6ZQQ2 1576 aa30.15■■■□□ 2.42
ITGA4-202ENST00000339307 NEURL4Q96JN8 1562 aa30.15■■■□□ 2.42
ITGA4-202ENST00000339307 ANKRD30AQ9BXX3 1397 aa30.14■■■□□ 2.42
ITGA4-202ENST00000339307 KANK1Q14678 1352 aa30.13■■■□□ 2.41
ITGA4-202ENST00000339307 NPHP4O75161 1426 aaPredicted RBP30.11■■■□□ 2.41
ITGA4-202ENST00000339307 DISP3Q9P2K9 1392 aa30.09■■■□□ 2.41
ITGA4-202ENST00000339307 PRDM15P57071 1507 aaPredicted RBP30.08■■■□□ 2.41
ITGA4-202ENST00000339307 SCAF1Q9H7N4 1312 aaKnown RBP30.07■■■□□ 2.4
ITGA4-202ENST00000339307 STAG3Q9UJ98 1225 aa30.04■■■□□ 2.4
ITGA4-202ENST00000339307 DEPDC5O75140 1603 aa30.03■■■□□ 2.4
ITGA4-202ENST00000339307 CPS1P31327 1500 aa30.03■■■□□ 2.4
ITGA4-202ENST00000339307 MED14O60244 1454 aa30.02■■■□□ 2.4
ITGA4-202ENST00000339307 ARHGAP31Q2M1Z3 1444 aa30.02■■■□□ 2.4
ITGA4-202ENST00000339307 PIP4K2BP78356 416 aa30.02■■■□□ 2.4
ITGA4-202ENST00000339307 IQGAP1P46940 1657 aa30.01■■■□□ 2.39
ITGA4-202ENST00000339307 TXNDC2Q86VQ3 553 aa29.99■■■□□ 2.39
ITGA4-202ENST00000339307 UBR1Q8IWV7 1749 aa29.99■■■□□ 2.39
ITGA4-202ENST00000339307 TOM1O60784 492 aa29.98■■■□□ 2.39
ITGA4-202ENST00000339307 VWDEQ8N2E2 1590 aa29.97■■■□□ 2.39
ITGA4-202ENST00000339307 EID1Q9Y6B2 187 aa29.96■■■□□ 2.39
ITGA4-202ENST00000339307 SCAF11Q99590 1463 aaKnown RBP29.93■■■□□ 2.38
ITGA4-202ENST00000339307 LTKP29376 864 aa29.93■■■□□ 2.38
ITGA4-202ENST00000339307 ADGRL2O95490 1459 aa29.92■■■□□ 2.38
ITGA4-202ENST00000339307 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
ITGA4-202ENST00000339307 PIK3C2BO00750 1634 aa29.9■■■□□ 2.38
ITGA4-202ENST00000339307 IDI1Q13907 227 aa29.89■■■□□ 2.38
ITGA4-202ENST00000339307 ANKRD50Q9ULJ7 1429 aa29.89■■■□□ 2.38
ITGA4-202ENST00000339307 LMTK2Q8IWU2 1503 aa29.88■■■□□ 2.37
ITGA4-202ENST00000339307 ITGAEP38570 1179 aa29.87■■■□□ 2.37
ITGA4-202ENST00000339307 SLIT1O75093 1534 aa29.86■■■□□ 2.37
ITGA4-202ENST00000339307 ILDR2Q71H61 639 aa29.85■■■□□ 2.37
ITGA4-202ENST00000339307 ARHGAP23Q9P227 1491 aa29.85■■■□□ 2.37
ITGA4-202ENST00000339307 TMEM2Q9UHN6 1383 aa29.84■■■□□ 2.37
ITGA4-202ENST00000339307 HSPA1LP34931 641 aa29.84■■■□□ 2.37
ITGA4-202ENST00000339307 EFCAB6Q5THR3 1501 aa29.83■■■□□ 2.37
ITGA4-202ENST00000339307 SENP3Q9H4L4 574 aaPredicted RBP29.82■■■□□ 2.36
ITGA4-202ENST00000339307 STRCP1A6NGW2 1772 aa29.82■■■□□ 2.36
ITGA4-202ENST00000339307 BCANQ96GW7 911 aa29.8■■■□□ 2.36
ITGA4-202ENST00000339307 LRRC7Q96NW7 1537 aa29.8■■■□□ 2.36
ITGA4-202ENST00000339307 SYNMO15061 1565 aa29.8■■■□□ 2.36
ITGA4-202ENST00000339307 SLC52A1Q9NWF4 448 aa29.78■■■□□ 2.36
ITGA4-202ENST00000339307 NOS1P29475 1434 aa29.77■■■□□ 2.36
ITGA4-202ENST00000339307 SLC26A8Q96RN1 970 aa29.74■■■□□ 2.35
ITGA4-202ENST00000339307 KDM5AP29375 1690 aaKnown RBP29.72■■■□□ 2.35
ITGA4-202ENST00000339307 RPRD2Q5VT52 1461 aaKnown RBP29.71■■■□□ 2.35
ITGA4-202ENST00000339307 CHGAP10645 457 aaKnown RBP29.71■■■□□ 2.35
ITGA4-202ENST00000339307 ADGRB3O60242 1522 aa29.71■■■□□ 2.35
ITGA4-202ENST00000339307 ROCK1Q13464 1354 aa29.7■■■□□ 2.35
ITGA4-202ENST00000339307 TET3O43151 1660 aa29.69■■■□□ 2.34
ITGA4-202ENST00000339307 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
ITGA4-202ENST00000339307 UNC13BO14795 1591 aa29.66■■■□□ 2.34
ITGA4-202ENST00000339307 ALKQ9UM73 1620 aa29.66■■■□□ 2.34
ITGA4-202ENST00000339307 HDGFP51858 240 aaKnown RBP29.64■■■□□ 2.34
ITGA4-202ENST00000339307 GCC2Q8IWJ2 1684 aa29.64■■■□□ 2.34
ITGA4-202ENST00000339307 NUP155O75694 1391 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms