RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 KIF7Q2M1P5 1343 aa18.16■□□□□ 0.5
CDK5RAP1-201ENST00000339269 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP1-201ENST00000339269 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
CDK5RAP1-201ENST00000339269 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
CDK5RAP1-201ENST00000339269 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
CDK5RAP1-201ENST00000339269 PLA2R1Q13018 1463 aa18.15■□□□□ 0.5
CDK5RAP1-201ENST00000339269 KDM5CP41229 1560 aa18.14■□□□□ 0.5
CDK5RAP1-201ENST00000339269 ABCC1P33527 1531 aa18.14■□□□□ 0.49
CDK5RAP1-201ENST00000339269 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
CDK5RAP1-201ENST00000339269 CFAP74Q9C0B2 1584 aa18.12■□□□□ 0.49
CDK5RAP1-201ENST00000339269 USP47Q96K76 1375 aa18.12■□□□□ 0.49
CDK5RAP1-201ENST00000339269 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
CDK5RAP1-201ENST00000339269 FANCAO15360 1455 aa18.1■□□□□ 0.49
CDK5RAP1-201ENST00000339269 IQGAP3Q86VI3 1631 aa18.1■□□□□ 0.49
CDK5RAP1-201ENST00000339269 DUOX2Q9NRD8 1548 aa18.09■□□□□ 0.49
CDK5RAP1-201ENST00000339269 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
CDK5RAP1-201ENST00000339269 NEO1Q92859 1461 aa18.09■□□□□ 0.49
CDK5RAP1-201ENST00000339269 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP1-201ENST00000339269 ARAP3Q8WWN8 1544 aa18.07■□□□□ 0.48
CDK5RAP1-201ENST00000339269 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP1-201ENST00000339269 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP1-201ENST00000339269 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
CDK5RAP1-201ENST00000339269 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP1-201ENST00000339269 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
CDK5RAP1-201ENST00000339269 ATP10AO60312 1499 aa18.02■□□□□ 0.48
CDK5RAP1-201ENST00000339269 ZFYVE16Q7Z3T8 1539 aa18.02■□□□□ 0.47
CDK5RAP1-201ENST00000339269 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.47
CDK5RAP1-201ENST00000339269 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
CDK5RAP1-201ENST00000339269 A2MP01023 1474 aa18.01■□□□□ 0.47
CDK5RAP1-201ENST00000339269 CCDC144AA2RUR9 1427 aa18■□□□□ 0.47
CDK5RAP1-201ENST00000339269 RICTORQ6R327 1708 aa18■□□□□ 0.47
CDK5RAP1-201ENST00000339269 TRPM1Q7Z4N2 1603 aa17.99■□□□□ 0.47
CDK5RAP1-201ENST00000339269 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
CDK5RAP1-201ENST00000339269 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
CDK5RAP1-201ENST00000339269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.479e-7■■■□□ 18.2
CDK5RAP1-201ENST00000339269 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
CDK5RAP1-201ENST00000339269 ARID4BQ4LE39 1312 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP1-201ENST00000339269 FRMPD1Q5SYB0 1578 aa17.97■□□□□ 0.47
CDK5RAP1-201ENST00000339269 CARD11Q9BXL7 1154 aa17.97■□□□□ 0.47
CDK5RAP1-201ENST00000339269 KDM2AQ9Y2K7 1162 aa17.97■□□□□ 0.47
CDK5RAP1-201ENST00000339269 SCAPERQ9BY12 1400 aa17.97■□□□□ 0.47
CDK5RAP1-201ENST00000339269 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
CDK5RAP1-201ENST00000339269 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
CDK5RAP1-201ENST00000339269 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP1-201ENST00000339269 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDK5RAP1-201ENST00000339269 DEPDC5O75140 1603 aa17.93■□□□□ 0.46
CDK5RAP1-201ENST00000339269 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
CDK5RAP1-201ENST00000339269 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP1-201ENST00000339269 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
CDK5RAP1-201ENST00000339269 ROCK2O75116 1388 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP1-201ENST00000339269 FKBP8Q14318 412 aa17.91■□□□□ 0.46
CDK5RAP1-201ENST00000339269 E9PCH4 1651 aa17.91■□□□□ 0.46
CDK5RAP1-201ENST00000339269 LAMC1P11047 1609 aa17.91■□□□□ 0.46
CDK5RAP1-201ENST00000339269 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
CDK5RAP1-201ENST00000339269 VWDEQ8N2E2 1590 aa17.9■□□□□ 0.46
CDK5RAP1-201ENST00000339269 ATP7AQ04656 1500 aa17.9■□□□□ 0.46
CDK5RAP1-201ENST00000339269 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
CDK5RAP1-201ENST00000339269 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
CDK5RAP1-201ENST00000339269 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP1-201ENST00000339269 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
CDK5RAP1-201ENST00000339269 PTPRTO14522 1441 aa17.88■□□□□ 0.45
CDK5RAP1-201ENST00000339269 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
CDK5RAP1-201ENST00000339269 TRPM2O94759 1503 aa17.87■□□□□ 0.45
CDK5RAP1-201ENST00000339269 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
CDK5RAP1-201ENST00000339269 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP1-201ENST00000339269 BCANQ96GW7 911 aa17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 HECW2Q9P2P5 1572 aa17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP1-201ENST00000339269 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.44
CDK5RAP1-201ENST00000339269 TESK2Q96S53 571 aa17.83■□□□□ 0.44
CDK5RAP1-201ENST00000339269 TET3O43151 1660 aa17.83■□□□□ 0.44
CDK5RAP1-201ENST00000339269 CLTCL1P53675 1640 aa17.83■□□□□ 0.44
CDK5RAP1-201ENST00000339269 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
CDK5RAP1-201ENST00000339269 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
CDK5RAP1-201ENST00000339269 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
CDK5RAP1-201ENST00000339269 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
CDK5RAP1-201ENST00000339269 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
CDK5RAP1-201ENST00000339269 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
CDK5RAP1-201ENST00000339269 CEP152O94986 1710 aa17.79■□□□□ 0.44
CDK5RAP1-201ENST00000339269 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
CDK5RAP1-201ENST00000339269 MLH3Q9UHC1 1453 aa17.78■□□□□ 0.44
CDK5RAP1-201ENST00000339269 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
CDK5RAP1-201ENST00000339269 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
CDK5RAP1-201ENST00000339269 SIGLEC1Q9BZZ2 1709 aa17.76■□□□□ 0.43
CDK5RAP1-201ENST00000339269 NEFLP07196 543 aa17.75■□□□□ 0.43
CDK5RAP1-201ENST00000339269 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
CDK5RAP1-201ENST00000339269 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP1-201ENST00000339269 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP1-201ENST00000339269 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
CDK5RAP1-201ENST00000339269 KIF3BO15066 747 aa17.73■□□□□ 0.43
CDK5RAP1-201ENST00000339269 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP1-201ENST00000339269 EFCAB6Q5THR3 1501 aa17.73■□□□□ 0.43
CDK5RAP1-201ENST00000339269 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP1-201ENST00000339269 PARD3Q8TEW0 1356 aa17.72■□□□□ 0.43
CDK5RAP1-201ENST00000339269 LMTK2Q8IWU2 1503 aa17.72■□□□□ 0.43
CDK5RAP1-201ENST00000339269 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
CDK5RAP1-201ENST00000339269 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms