RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 SLC4A3P48751 1232 aa26.93■■□□□ 1.9
RUNX3-202ENST00000338888 NFKBIBQ15653 356 aa26.93■■□□□ 1.9
RUNX3-202ENST00000338888 CDCA7LQ96GN5 454 aa26.92■■□□□ 1.9
RUNX3-202ENST00000338888 KDM5CP41229 1560 aa26.91■■□□□ 1.9
RUNX3-202ENST00000338888 RALBP1Q15311 655 aa26.9■■□□□ 1.9
RUNX3-202ENST00000338888 CARD11Q9BXL7 1154 aa26.9■■□□□ 1.9
RUNX3-202ENST00000338888 PZPP20742 1482 aa26.9■■□□□ 1.9
RUNX3-202ENST00000338888 FRAT1Q92837 279 aaPredicted RBP26.88■■□□□ 1.89
RUNX3-202ENST00000338888 PDE3BQ13370 1112 aa26.87■■□□□ 1.89
RUNX3-202ENST00000338888 CRBNQ96SW2 442 aa26.86■■□□□ 1.89
RUNX3-202ENST00000338888 ST20-MTHFSA0A0A6YYL1 179 aa26.85■■□□□ 1.89
RUNX3-202ENST00000338888 PKD2Q13563 968 aa26.85■■□□□ 1.89
RUNX3-202ENST00000338888 KIF14Q15058 1648 aa26.84■■□□□ 1.89
RUNX3-202ENST00000338888 DNMT1P26358 1616 aaKnown RBP26.83■■□□□ 1.89
RUNX3-202ENST00000338888 KIAA1107Q9UPP5 1409 aa26.82■■□□□ 1.88
RUNX3-202ENST00000338888 DAXXQ9UER7 740 aaPredicted RBP26.82■■□□□ 1.88
RUNX3-202ENST00000338888 PTPRGP23470 1445 aa26.82■■□□□ 1.88
RUNX3-202ENST00000338888 EIF5BO60841 1220 aaKnown RBP26.82■■□□□ 1.88
RUNX3-202ENST00000338888 KTN1Q86UP2 1357 aaKnown RBP26.81■■□□□ 1.88
RUNX3-202ENST00000338888 NLRP13Q86W25 1043 aa26.8■■□□□ 1.88
RUNX3-202ENST00000338888 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
RUNX3-202ENST00000338888 UBE2Q2Q8WVN8 375 aa26.78■■□□□ 1.88
RUNX3-202ENST00000338888 TROQ12816 1431 aaPredicted RBP26.78■■□□□ 1.88
RUNX3-202ENST00000338888 PLEKHD1A6NEE1 506 aa26.76■■□□□ 1.87
RUNX3-202ENST00000338888 ABCA8O94911 1581 aa26.75■■□□□ 1.87
RUNX3-202ENST00000338888 RALGAPBQ86X10 1494 aa26.75■■□□□ 1.87
RUNX3-202ENST00000338888 ZNF777Q9ULD5 760 aaPredicted RBP26.74■■□□□ 1.87
RUNX3-202ENST00000338888 C20orf194Q5TEA3 1177 aa26.73■■□□□ 1.87
RUNX3-202ENST00000338888 ATP10BO94823 1461 aa26.73■■□□□ 1.87
RUNX3-202ENST00000338888 UHRF1BP1Q6BDS2 1440 aa26.72■■□□□ 1.87
RUNX3-202ENST00000338888 CFDP1Q9UEE9 299 aaPredicted RBP26.71■■□□□ 1.87
RUNX3-202ENST00000338888 ERCC6L2Q5T890 1561 aa26.7■■□□□ 1.87
RUNX3-202ENST00000338888 FRAT2O75474 233 aaPredicted RBP26.69■■□□□ 1.86
RUNX3-202ENST00000338888 PARD3Q8TEW0 1356 aa26.69■■□□□ 1.86
RUNX3-202ENST00000338888 KDM2BQ8NHM5 1336 aa26.66■■□□□ 1.86
RUNX3-202ENST00000338888 DCAF11Q8TEB1 546 aa26.66■■□□□ 1.86
RUNX3-202ENST00000338888 FAM161AQ3B820 660 aa26.65■■□□□ 1.86
RUNX3-202ENST00000338888 C8orf34Q49A92 452 aa26.64■■□□□ 1.85
RUNX3-202ENST00000338888 CC2D1BQ5T0F9 858 aaKnown RBP26.63■■□□□ 1.85
RUNX3-202ENST00000338888 SHROOM2Q13796 1616 aa26.63■■□□□ 1.85
RUNX3-202ENST00000338888 GPATCH8Q9UKJ3 1502 aaKnown RBP26.62■■□□□ 1.85
RUNX3-202ENST00000338888 CENPQQ7L2Z9 268 aaPredicted RBP26.62■■□□□ 1.85
RUNX3-202ENST00000338888 E9PCH4 1651 aa26.61■■□□□ 1.85
RUNX3-202ENST00000338888 PER1O15534 1290 aaPredicted RBP26.61■■□□□ 1.85
RUNX3-202ENST00000338888 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
RUNX3-202ENST00000338888 NUP155O75694 1391 aa26.57■■□□□ 1.84
RUNX3-202ENST00000338888 RGS3P49796 1198 aa26.56■■□□□ 1.84
RUNX3-202ENST00000338888 FAM43AQ8N2R8 423 aa26.55■■□□□ 1.84
RUNX3-202ENST00000338888 BLMP54132 1417 aaPredicted RBP26.55■■□□□ 1.84
RUNX3-202ENST00000338888 ANKRD50Q9ULJ7 1429 aa26.55■■□□□ 1.84
RUNX3-202ENST00000338888 ADCY10Q96PN6 1610 aa26.55■■□□□ 1.84
RUNX3-202ENST00000338888 ANKRD30AQ9BXX3 1397 aa26.54■■□□□ 1.84
RUNX3-202ENST00000338888 ARHGEF12Q9NZN5 1544 aa26.54■■□□□ 1.84
RUNX3-202ENST00000338888 CLASP1Q7Z460 1538 aa26.53■■□□□ 1.84
RUNX3-202ENST00000338888 RSPH6AQ9H0K4 717 aa26.52■■□□□ 1.84
RUNX3-202ENST00000338888 ITSN2Q9NZM3 1697 aa26.52■■□□□ 1.84
RUNX3-202ENST00000338888 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
RUNX3-202ENST00000338888 ADGRL2O95490 1459 aa26.5■■□□□ 1.83
RUNX3-202ENST00000338888 ABCC10Q5T3U5 1492 aa26.49■■□□□ 1.83
RUNX3-202ENST00000338888 ADAMTS8Q9UP79 889 aa26.48■■□□□ 1.83
RUNX3-202ENST00000338888 PANK3Q9H999 370 aa26.47■■□□□ 1.83
RUNX3-202ENST00000338888 ZMYM4Q5VZL5 1548 aa26.47■■□□□ 1.83
RUNX3-202ENST00000338888 NBPF1Q3BBV0 1214 aa26.46■■□□□ 1.83
RUNX3-202ENST00000338888 INSRP06213 1382 aa26.46■■□□□ 1.83
RUNX3-202ENST00000338888 DUSP27Q5VZP5 1158 aa26.45■■□□□ 1.83
RUNX3-202ENST00000338888 CDC42BPAQ5VT25 1732 aa26.45■■□□□ 1.82
RUNX3-202ENST00000338888 ABCC2Q92887 1545 aa26.44■■□□□ 1.82
RUNX3-202ENST00000338888 PLEKHH2Q8IVE3 1493 aa26.43■■□□□ 1.82
RUNX3-202ENST00000338888 POGKQ9P215 609 aa26.43■■□□□ 1.82
RUNX3-202ENST00000338888 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
RUNX3-202ENST00000338888 PLEKHH1Q9ULM0 1364 aa26.41■■□□□ 1.82
RUNX3-202ENST00000338888 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.4■■□□□ 1.82
RUNX3-202ENST00000338888 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
RUNX3-202ENST00000338888 DISP3Q9P2K9 1392 aa26.39■■□□□ 1.82
RUNX3-202ENST00000338888 CROCC2H7BZ55 1655 aa26.36■■□□□ 1.81
RUNX3-202ENST00000338888 GOLGA2Q08379 1002 aa26.36■■□□□ 1.81
RUNX3-202ENST00000338888 TESK2Q96S53 571 aa26.35■■□□□ 1.81
RUNX3-202ENST00000338888 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
RUNX3-202ENST00000338888 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
RUNX3-202ENST00000338888 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
RUNX3-202ENST00000338888 RRAGDQ9NQL2 400 aaPredicted RBP26.34■■□□□ 1.81
RUNX3-202ENST00000338888 USP19O94966 1318 aa26.34■■□□□ 1.81
RUNX3-202ENST00000338888 WDR43Q15061 677 aaKnown RBP eCLIP26.34■■□□□ 1.81
RUNX3-202ENST00000338888 COL17A1Q9UMD9 1497 aaPredicted RBP26.33■■□□□ 1.81
RUNX3-202ENST00000338888 SLKQ9H2G2 1235 aaPredicted RBP26.33■■□□□ 1.8
RUNX3-202ENST00000338888 KDM5DQ9BY66 1539 aa26.31■■□□□ 1.8
RUNX3-202ENST00000338888 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
RUNX3-202ENST00000338888 SEC24BO95487 1268 aa26.3■■□□□ 1.8
RUNX3-202ENST00000338888 C9orf84Q5VXU9 1444 aa26.3■■□□□ 1.8
RUNX3-202ENST00000338888 ZNF521Q96K83 1311 aa26.3■■□□□ 1.8
RUNX3-202ENST00000338888 TRPM1Q7Z4N2 1603 aa26.3■■□□□ 1.8
RUNX3-202ENST00000338888 TTC37Q6PGP7 1564 aa26.29■■□□□ 1.8
RUNX3-202ENST00000338888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
RUNX3-202ENST00000338888 IGHDP01880 384 aa26.28■■□□□ 1.8
RUNX3-202ENST00000338888 ZCCHC11Q5TAX3 1644 aaKnown RBP26.28■■□□□ 1.8
RUNX3-202ENST00000338888 TMF1P82094 1093 aa26.27■■□□□ 1.8
RUNX3-202ENST00000338888 SLFN5Q08AF3 891 aa26.27■■□□□ 1.8
RUNX3-202ENST00000338888 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
RUNX3-202ENST00000338888 PPP2R1AP30153 589 aa26.27■■□□□ 1.8
RUNX3-202ENST00000338888 BCAR3O75815 825 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms