RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
PACRG-201ENST00000337019 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
PACRG-201ENST00000337019 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
PACRG-201ENST00000337019 ZMYM3Q14202 1370 aa12.82□□□□□ -0.36
PACRG-201ENST00000337019 NPATQ14207 1427 aa12.82□□□□□ -0.36
PACRG-201ENST00000337019 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
PACRG-201ENST00000337019 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
PACRG-201ENST00000337019 ERBINQ96RT1 1412 aa12.8□□□□□ -0.36
PACRG-201ENST00000337019 RRP7BPQ9NSQ0 103 aa12.8□□□□□ -0.36
PACRG-201ENST00000337019 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
PACRG-201ENST00000337019 HSPA2P54652 639 aa12.8□□□□□ -0.36
PACRG-201ENST00000337019 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
PACRG-201ENST00000337019 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
PACRG-201ENST00000337019 KANK1Q14678 1352 aa12.78□□□□□ -0.36
PACRG-201ENST00000337019 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.36
PACRG-201ENST00000337019 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
PACRG-201ENST00000337019 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
PACRG-201ENST00000337019 PZPP20742 1482 aa12.75□□□□□ -0.37
PACRG-201ENST00000337019 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
PACRG-201ENST00000337019 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
PACRG-201ENST00000337019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
PACRG-201ENST00000337019 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
PACRG-201ENST00000337019 TNRQ92752 1358 aa12.74□□□□□ -0.37
PACRG-201ENST00000337019 ABCC3O15438 1527 aa12.74□□□□□ -0.37
PACRG-201ENST00000337019 ITGAEP38570 1179 aa12.73□□□□□ -0.37
PACRG-201ENST00000337019 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
PACRG-201ENST00000337019 PRDM15P57071 1507 aaPredicted RBP12.73□□□□□ -0.37
PACRG-201ENST00000337019 MYO3AQ8NEV4 1616 aa12.72□□□□□ -0.37
PACRG-201ENST00000337019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
PACRG-201ENST00000337019 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
PACRG-201ENST00000337019 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
PACRG-201ENST00000337019 ROCK1Q13464 1354 aa12.7□□□□□ -0.38
PACRG-201ENST00000337019 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
PACRG-201ENST00000337019 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
PACRG-201ENST00000337019 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
PACRG-201ENST00000337019 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
PACRG-201ENST00000337019 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
PACRG-201ENST00000337019 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
PACRG-201ENST00000337019 CEP152O94986 1710 aa12.68□□□□□ -0.38
PACRG-201ENST00000337019 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
PACRG-201ENST00000337019 DEPDC5O75140 1603 aa12.68□□□□□ -0.38
PACRG-201ENST00000337019 ERVK-7P63135 1459 aa12.67□□□□□ -0.38
PACRG-201ENST00000337019 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
PACRG-201ENST00000337019 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
PACRG-201ENST00000337019 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
PACRG-201ENST00000337019 SPATA31D1Q6ZQQ2 1576 aa12.65□□□□□ -0.38
PACRG-201ENST00000337019 PKD2Q13563 968 aa12.65□□□□□ -0.38
PACRG-201ENST00000337019 PTPRTO14522 1441 aa12.64□□□□□ -0.39
PACRG-201ENST00000337019 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
PACRG-201ENST00000337019 UGGT1Q9NYU2 1555 aa12.64□□□□□ -0.39
PACRG-201ENST00000337019 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
PACRG-201ENST00000337019 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
PACRG-201ENST00000337019 VWDEQ8N2E2 1590 aa12.62□□□□□ -0.39
PACRG-201ENST00000337019 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
PACRG-201ENST00000337019 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
PACRG-201ENST00000337019 UNC13BO14795 1591 aa12.61□□□□□ -0.39
PACRG-201ENST00000337019 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
PACRG-201ENST00000337019 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
PACRG-201ENST00000337019 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
PACRG-201ENST00000337019 NUP155O75694 1391 aa12.59□□□□□ -0.39
PACRG-201ENST00000337019 TET3O43151 1660 aa12.58□□□□□ -0.39
PACRG-201ENST00000337019 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
PACRG-201ENST00000337019 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
PACRG-201ENST00000337019 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 EID1Q9Y6B2 187 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 NOS1P29475 1434 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 NAIPQ13075 1403 aa12.55□□□□□ -0.4
PACRG-201ENST00000337019 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
PACRG-201ENST00000337019 FBXO41Q8TF61 875 aa12.54□□□□□ -0.4
PACRG-201ENST00000337019 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
PACRG-201ENST00000337019 CFAP65Q6ZU64 1925 aaKnown RBP12.53□□□□□ -0.4
PACRG-201ENST00000337019 PIK3C2BO00750 1634 aa12.53□□□□□ -0.4
PACRG-201ENST00000337019 SCAF11Q99590 1463 aaKnown RBP12.53□□□□□ -0.4
PACRG-201ENST00000337019 UBR1Q8IWV7 1749 aa12.53□□□□□ -0.4
PACRG-201ENST00000337019 SYNMO15061 1565 aa12.53□□□□□ -0.4
PACRG-201ENST00000337019 ADGRB3O60242 1522 aa12.52□□□□□ -0.4
PACRG-201ENST00000337019 IDI1Q13907 227 aa12.51□□□□□ -0.41
PACRG-201ENST00000337019 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
PACRG-201ENST00000337019 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
PACRG-201ENST00000337019 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
PACRG-201ENST00000337019 SLIT1O75093 1534 aa12.5□□□□□ -0.41
PACRG-201ENST00000337019 ZNF335Q9H4Z2 1342 aaPredicted RBP12.5□□□□□ -0.41
PACRG-201ENST00000337019 MED14O60244 1454 aa12.5□□□□□ -0.41
PACRG-201ENST00000337019 TMEM2Q9UHN6 1383 aa12.5□□□□□ -0.41
PACRG-201ENST00000337019 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
PACRG-201ENST00000337019 HDGFP51858 240 aaKnown RBP12.49□□□□□ -0.41
PACRG-201ENST00000337019 E9PCH4 1651 aa12.49□□□□□ -0.41
PACRG-201ENST00000337019 IQGAP1P46940 1657 aa12.49□□□□□ -0.41
PACRG-201ENST00000337019 ARHGAP23Q9P227 1491 aa12.49□□□□□ -0.41
PACRG-201ENST00000337019 PPP1R15AO75807 674 aaPredicted RBP12.48□□□□□ -0.41
PACRG-201ENST00000337019 BCANQ96GW7 911 aa12.48□□□□□ -0.41
PACRG-201ENST00000337019 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
PACRG-201ENST00000337019 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
PACRG-201ENST00000337019 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
PACRG-201ENST00000337019 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
PACRG-201ENST00000337019 CPS1P31327 1500 aa12.46□□□□□ -0.41
PACRG-201ENST00000337019 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms