RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
SNCA-201ENST00000336904 ZCCHC11Q5TAX3 1644 aaKnown RBP12.15□□□□□ -0.46
SNCA-201ENST00000336904 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
SNCA-201ENST00000336904 MYO5CQ9NQX4 1742 aa12.13□□□□□ -0.47
SNCA-201ENST00000336904 PLA2R1Q13018 1463 aa12.13□□□□□ -0.47
SNCA-201ENST00000336904 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
SNCA-201ENST00000336904 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
SNCA-201ENST00000336904 KDM5CP41229 1560 aa12.12□□□□□ -0.47
SNCA-201ENST00000336904 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
SNCA-201ENST00000336904 KIF3BO15066 747 aa12.11□□□□□ -0.47
SNCA-201ENST00000336904 PLCH2O75038 1416 aa12.1□□□□□ -0.47
SNCA-201ENST00000336904 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
SNCA-201ENST00000336904 RALGAPBQ86X10 1494 aa12.09□□□□□ -0.47
SNCA-201ENST00000336904 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
SNCA-201ENST00000336904 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
SNCA-201ENST00000336904 A2MP01023 1474 aa12.08□□□□□ -0.48
SNCA-201ENST00000336904 SCAPERQ9BY12 1400 aa12.08□□□□□ -0.48
SNCA-201ENST00000336904 KDM5DQ9BY66 1539 aa12.07□□□□□ -0.48
SNCA-201ENST00000336904 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
SNCA-201ENST00000336904 DISP3Q9P2K9 1392 aa12.06□□□□□ -0.48
SNCA-201ENST00000336904 PRAG1Q86YV5 1406 aa12.06□□□□□ -0.48
SNCA-201ENST00000336904 B4GALNT3Q6L9W6 998 aa12.05□□□□□ -0.48
SNCA-201ENST00000336904 UHRF1BP1Q6BDS2 1440 aa12.05□□□□□ -0.48
SNCA-201ENST00000336904 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
SNCA-201ENST00000336904 ABCC1P33527 1531 aa12.04□□□□□ -0.48
SNCA-201ENST00000336904 FANCAO15360 1455 aa12.04□□□□□ -0.48
SNCA-201ENST00000336904 GGT6Q6P531 493 aa12.03□□□□□ -0.48
SNCA-201ENST00000336904 PANK3Q9H999 370 aa12.03□□□□□ -0.48
SNCA-201ENST00000336904 UGGT1Q9NYU2 1555 aa12.02□□□□□ -0.48
SNCA-201ENST00000336904 DUOX2Q9NRD8 1548 aa12.02□□□□□ -0.48
SNCA-201ENST00000336904 POLR1AO95602 1720 aaPredicted RBP12.02□□□□□ -0.48
SNCA-201ENST00000336904 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.49
SNCA-201ENST00000336904 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
SNCA-201ENST00000336904 UNC13BO14795 1591 aa12.01□□□□□ -0.49
SNCA-201ENST00000336904 ZBED9Q6R2W3 1325 aa12.01□□□□□ -0.49
SNCA-201ENST00000336904 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
SNCA-201ENST00000336904 TESK2Q96S53 571 aa12.01□□□□□ -0.49
SNCA-201ENST00000336904 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
SNCA-201ENST00000336904 ADGRL1O94910 1474 aa12□□□□□ -0.49
SNCA-201ENST00000336904 RAPGEF3O95398 923 aa12□□□□□ -0.49
SNCA-201ENST00000336904 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
SNCA-201ENST00000336904 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
SNCA-201ENST00000336904 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
SNCA-201ENST00000336904 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
SNCA-201ENST00000336904 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
SNCA-201ENST00000336904 IQGAP3Q86VI3 1631 aa11.99□□□□□ -0.49
SNCA-201ENST00000336904 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
SNCA-201ENST00000336904 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
SNCA-201ENST00000336904 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
SNCA-201ENST00000336904 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
SNCA-201ENST00000336904 E9PCH4 1651 aa11.97□□□□□ -0.49
SNCA-201ENST00000336904 ATP10AO60312 1499 aa11.96□□□□□ -0.49
SNCA-201ENST00000336904 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.5
SNCA-201ENST00000336904 ADGRF5Q8IZF2 1346 aa11.96□□□□□ -0.5
SNCA-201ENST00000336904 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.5
SNCA-201ENST00000336904 ATP7AQ04656 1500 aa11.95□□□□□ -0.5
SNCA-201ENST00000336904 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
SNCA-201ENST00000336904 TMF1P82094 1093 aa11.95□□□□□ -0.5
SNCA-201ENST00000336904 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
SNCA-201ENST00000336904 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
SNCA-201ENST00000336904 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
SNCA-201ENST00000336904 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
SNCA-201ENST00000336904 TMEM132EQ6IEE7 984 aa11.93□□□□□ -0.5
SNCA-201ENST00000336904 KANK1Q14678 1352 aa11.92□□□□□ -0.5
SNCA-201ENST00000336904 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNCA-201ENST00000336904 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
SNCA-201ENST00000336904 ARID4BQ4LE39 1312 aaPredicted RBP11.92□□□□□ -0.5
SNCA-201ENST00000336904 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
SNCA-201ENST00000336904 TNNT2P45379 298 aaPredicted RBP11.91□□□□□ -0.5
SNCA-201ENST00000336904 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
SNCA-201ENST00000336904 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
SNCA-201ENST00000336904 RALBP1Q15311 655 aa11.9□□□□□ -0.5
SNCA-201ENST00000336904 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
SNCA-201ENST00000336904 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
SNCA-201ENST00000336904 PRDM15P57071 1507 aaPredicted RBP11.9□□□□□ -0.5
SNCA-201ENST00000336904 PLIN1O60240 522 aa11.89□□□□□ -0.51
SNCA-201ENST00000336904 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
SNCA-201ENST00000336904 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
SNCA-201ENST00000336904 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
SNCA-201ENST00000336904 CCDC146Q8IYE0 955 aa11.88□□□□□ -0.51
SNCA-201ENST00000336904 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
SNCA-201ENST00000336904 SPHKAPQ2M3C7 1700 aa11.88□□□□□ -0.51
SNCA-201ENST00000336904 WASHC2CQ9Y4E1 1318 aa11.88□□□□□ -0.51
SNCA-201ENST00000336904 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
SNCA-201ENST00000336904 INO80Q9ULG1 1556 aaPredicted RBP11.87□□□□□ -0.51
SNCA-201ENST00000336904 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
SNCA-201ENST00000336904 ADAMTS8Q9UP79 889 aa11.87□□□□□ -0.51
SNCA-201ENST00000336904 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
SNCA-201ENST00000336904 RTEL1-TNFRSF6BF6WH68 1400 aa11.87□□□□□ -0.51
SNCA-201ENST00000336904 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
SNCA-201ENST00000336904 TRPM2O94759 1503 aa11.86□□□□□ -0.51
SNCA-201ENST00000336904 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
SNCA-201ENST00000336904 CEP152O94986 1710 aa11.85□□□□□ -0.51
SNCA-201ENST00000336904 SMG6Q86US8 1419 aaKnown RBP11.85□□□□□ -0.51
SNCA-201ENST00000336904 NOS1P29475 1434 aa11.85□□□□□ -0.51
SNCA-201ENST00000336904 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
SNCA-201ENST00000336904 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
SNCA-201ENST00000336904 STK26Q9P289 416 aa11.84□□□□□ -0.51
SNCA-201ENST00000336904 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
SNCA-201ENST00000336904 MLECQ14165 292 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms