RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
SSX2-201ENST00000336777 PREX1Q8TCU6 1659 aa16.31■□□□□ 0.2
SSX2-201ENST00000336777 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
SSX2-201ENST00000336777 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
SSX2-201ENST00000336777 KIF3BO15066 747 aa16.29■□□□□ 0.2
SSX2-201ENST00000336777 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
SSX2-201ENST00000336777 HSPA2P54652 639 aa16.28■□□□□ 0.2
SSX2-201ENST00000336777 CHIC2Q9UKJ5 165 aa16.28■□□□□ 0.2
SSX2-201ENST00000336777 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
SSX2-201ENST00000336777 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
SSX2-201ENST00000336777 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
SSX2-201ENST00000336777 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.19
SSX2-201ENST00000336777 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
SSX2-201ENST00000336777 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
SSX2-201ENST00000336777 MROH1Q8NDA8 1641 aa16.25■□□□□ 0.19
SSX2-201ENST00000336777 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
SSX2-201ENST00000336777 CEP152O94986 1710 aa16.24■□□□□ 0.19
SSX2-201ENST00000336777 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
SSX2-201ENST00000336777 MYO3AQ8NEV4 1616 aa16.24■□□□□ 0.19
SSX2-201ENST00000336777 ZMYM3Q14202 1370 aa16.22■□□□□ 0.19
SSX2-201ENST00000336777 KCNA4P22459 653 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 ITGAEP38570 1179 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 ABCC3O15438 1527 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
SSX2-201ENST00000336777 PTPRKQ15262 1439 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
SSX2-201ENST00000336777 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
SSX2-201ENST00000336777 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
SSX2-201ENST00000336777 CAMSAP1Q5T5Y3 1602 aa16.18■□□□□ 0.18
SSX2-201ENST00000336777 WASHC2CQ9Y4E1 1318 aa16.18■□□□□ 0.18
SSX2-201ENST00000336777 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
SSX2-201ENST00000336777 DEPDC5O75140 1603 aa16.17■□□□□ 0.18
SSX2-201ENST00000336777 NPATQ14207 1427 aa16.16■□□□□ 0.18
SSX2-201ENST00000336777 NCOA1Q15788 1441 aa16.16■□□□□ 0.18
SSX2-201ENST00000336777 PZPP20742 1482 aa16.16■□□□□ 0.18
SSX2-201ENST00000336777 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
SSX2-201ENST00000336777 CEP170BQ9Y4F5 1589 aaPredicted RBP16.15■□□□□ 0.18
SSX2-201ENST00000336777 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
SSX2-201ENST00000336777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
SSX2-201ENST00000336777 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
SSX2-201ENST00000336777 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
SSX2-201ENST00000336777 STRCQ7RTU9 1775 aa16.11■□□□□ 0.17
SSX2-201ENST00000336777 TNRQ92752 1358 aa16.11■□□□□ 0.17
SSX2-201ENST00000336777 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
SSX2-201ENST00000336777 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
SSX2-201ENST00000336777 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
SSX2-201ENST00000336777 NPM3O75607 178 aaKnown RBP16.1■□□□□ 0.17
SSX2-201ENST00000336777 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
SSX2-201ENST00000336777 ERVK-7P63135 1459 aa16.09■□□□□ 0.17
SSX2-201ENST00000336777 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.16
SSX2-201ENST00000336777 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
SSX2-201ENST00000336777 KANK1Q14678 1352 aa16.07■□□□□ 0.16
SSX2-201ENST00000336777 UNC13BO14795 1591 aa16.07■□□□□ 0.16
SSX2-201ENST00000336777 A2ML1A8K2U0 1454 aa16.06■□□□□ 0.16
SSX2-201ENST00000336777 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
SSX2-201ENST00000336777 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
SSX2-201ENST00000336777 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
SSX2-201ENST00000336777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSX2-201ENST00000336777 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
SSX2-201ENST00000336777 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.16
SSX2-201ENST00000336777 UGGT1Q9NYU2 1555 aa16.02■□□□□ 0.16
SSX2-201ENST00000336777 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
SSX2-201ENST00000336777 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
SSX2-201ENST00000336777 NCKAP5LQ9HCH0 1330 aa16.01■□□□□ 0.15
SSX2-201ENST00000336777 TET3O43151 1660 aa16.01■□□□□ 0.15
SSX2-201ENST00000336777 SYNMO15061 1565 aa16■□□□□ 0.15
SSX2-201ENST00000336777 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
SSX2-201ENST00000336777 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
SSX2-201ENST00000336777 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
SSX2-201ENST00000336777 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
SSX2-201ENST00000336777 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
SSX2-201ENST00000336777 UBR1Q8IWV7 1749 aa15.98■□□□□ 0.15
SSX2-201ENST00000336777 E9PCH4 1651 aa15.96■□□□□ 0.15
SSX2-201ENST00000336777 NAIPQ13075 1403 aa15.96■□□□□ 0.14
SSX2-201ENST00000336777 NUP155O75694 1391 aa15.94■□□□□ 0.14
SSX2-201ENST00000336777 PTPRTO14522 1441 aa15.93■□□□□ 0.14
SSX2-201ENST00000336777 HFM1A2PYH4 1435 aa15.92■□□□□ 0.14
SSX2-201ENST00000336777 NOS1P29475 1434 aa15.92■□□□□ 0.14
SSX2-201ENST00000336777 ADGRB3O60242 1522 aa15.91■□□□□ 0.14
SSX2-201ENST00000336777 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
SSX2-201ENST00000336777 IQGAP1P46940 1657 aa15.9■□□□□ 0.14
SSX2-201ENST00000336777 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
SSX2-201ENST00000336777 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
SSX2-201ENST00000336777 ILDR1Q86SU0 546 aaPredicted RBP15.88■□□□□ 0.13
SSX2-201ENST00000336777 STAG3Q9UJ98 1225 aa15.88■□□□□ 0.13
SSX2-201ENST00000336777 PKD2Q13563 968 aa15.87■□□□□ 0.13
SSX2-201ENST00000336777 THEMISQ8N1K5 641 aaPredicted RBP15.87■□□□□ 0.13
SSX2-201ENST00000336777 SPHKAPQ2M3C7 1700 aa15.87■□□□□ 0.13
SSX2-201ENST00000336777 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
SSX2-201ENST00000336777 LTBP4Q8N2S1 1624 aa15.87■□□□□ 0.13
SSX2-201ENST00000336777 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
SSX2-201ENST00000336777 IDI1Q13907 227 aa15.85■□□□□ 0.13
SSX2-201ENST00000336777 SLIT1O75093 1534 aa15.85■□□□□ 0.13
SSX2-201ENST00000336777 ANKLE2Q86XL3 938 aa15.85■□□□□ 0.13
SSX2-201ENST00000336777 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
SSX2-201ENST00000336777 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
SSX2-201ENST00000336777 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.13
SSX2-201ENST00000336777 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
SSX2-201ENST00000336777 CERKQ8TCT0 537 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms