RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 KDM5DQ9BY66 1539 aa17.53■□□□□ 0.4
MRPL55-203ENST00000336520 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.4
MRPL55-203ENST00000336520 FAM135AQ9P2D6 1515 aa17.52■□□□□ 0.4
MRPL55-203ENST00000336520 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
MRPL55-203ENST00000336520 EIF2AK4Q9P2K8 1649 aaKnown RBP17.51■□□□□ 0.39
MRPL55-203ENST00000336520 PTPRKQ15262 1439 aa17.51■□□□□ 0.39
MRPL55-203ENST00000336520 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
MRPL55-203ENST00000336520 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
MRPL55-203ENST00000336520 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
MRPL55-203ENST00000336520 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
MRPL55-203ENST00000336520 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
MRPL55-203ENST00000336520 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
MRPL55-203ENST00000336520 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
MRPL55-203ENST00000336520 PZPP20742 1482 aa17.45■□□□□ 0.38
MRPL55-203ENST00000336520 ABCC3O15438 1527 aa17.44■□□□□ 0.38
MRPL55-203ENST00000336520 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
MRPL55-203ENST00000336520 MROH1Q8NDA8 1641 aa17.43■□□□□ 0.38
MRPL55-203ENST00000336520 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-203ENST00000336520 NCOA1Q15788 1441 aa17.43■□□□□ 0.38
MRPL55-203ENST00000336520 TNRQ92752 1358 aa17.42■□□□□ 0.38
MRPL55-203ENST00000336520 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-203ENST00000336520 DMRT2Q9Y5R5 561 aa17.42■□□□□ 0.38
MRPL55-203ENST00000336520 ADGRL2O95490 1459 aa17.42■□□□□ 0.38
MRPL55-203ENST00000336520 ZNF142P52746 1687 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-203ENST00000336520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.41■□□□□ 0.38
MRPL55-203ENST00000336520 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
MRPL55-203ENST00000336520 CEP152O94986 1710 aa17.4■□□□□ 0.38
MRPL55-203ENST00000336520 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-203ENST00000336520 KANK1Q14678 1352 aa17.4■□□□□ 0.38
MRPL55-203ENST00000336520 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
MRPL55-203ENST00000336520 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
MRPL55-203ENST00000336520 DEPDC5O75140 1603 aa17.37■□□□□ 0.37
MRPL55-203ENST00000336520 ITGAEP38570 1179 aa17.37■□□□□ 0.37
MRPL55-203ENST00000336520 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
MRPL55-203ENST00000336520 PTPRTO14522 1441 aa17.34■□□□□ 0.37
MRPL55-203ENST00000336520 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
MRPL55-203ENST00000336520 PLA2R1Q13018 1463 aa17.34■□□□□ 0.37
MRPL55-203ENST00000336520 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
MRPL55-203ENST00000336520 NLRP1Q9C000 1473 aa17.34■□□□□ 0.37
MRPL55-203ENST00000336520 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.37
MRPL55-203ENST00000336520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
MRPL55-203ENST00000336520 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
MRPL55-203ENST00000336520 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
MRPL55-203ENST00000336520 ARHGAP31Q2M1Z3 1444 aa17.31■□□□□ 0.36
MRPL55-203ENST00000336520 PKD2Q13563 968 aa17.31■□□□□ 0.36
MRPL55-203ENST00000336520 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
MRPL55-203ENST00000336520 VWDEQ8N2E2 1590 aa17.29■□□□□ 0.36
MRPL55-203ENST00000336520 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
MRPL55-203ENST00000336520 THEMISQ8N1K5 641 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-203ENST00000336520 LMTK2Q8IWU2 1503 aa17.29■□□□□ 0.36
MRPL55-203ENST00000336520 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
MRPL55-203ENST00000336520 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
MRPL55-203ENST00000336520 FBXO41Q8TF61 875 aa17.26■□□□□ 0.35
MRPL55-203ENST00000336520 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
MRPL55-203ENST00000336520 UNC13BO14795 1591 aa17.24■□□□□ 0.35
MRPL55-203ENST00000336520 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
MRPL55-203ENST00000336520 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-203ENST00000336520 TET3O43151 1660 aa17.21■□□□□ 0.35
MRPL55-203ENST00000336520 NEURL4Q96JN8 1562 aa17.2■□□□□ 0.34
MRPL55-203ENST00000336520 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
MRPL55-203ENST00000336520 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
MRPL55-203ENST00000336520 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
MRPL55-203ENST00000336520 ZNF335Q9H4Z2 1342 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-203ENST00000336520 PIK3C2BO00750 1634 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 NUP155O75694 1391 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 NOS1P29475 1434 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 SYNMO15061 1565 aa17.18■□□□□ 0.34
MRPL55-203ENST00000336520 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-203ENST00000336520 IQGAP3Q86VI3 1631 aa17.17■□□□□ 0.34
MRPL55-203ENST00000336520 IDI1Q13907 227 aa17.16■□□□□ 0.34
MRPL55-203ENST00000336520 MED14O60244 1454 aa17.15■□□□□ 0.34
MRPL55-203ENST00000336520 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
MRPL55-203ENST00000336520 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
MRPL55-203ENST00000336520 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
MRPL55-203ENST00000336520 IQGAP1P46940 1657 aa17.13■□□□□ 0.33
MRPL55-203ENST00000336520 NAIPQ13075 1403 aa17.13■□□□□ 0.33
MRPL55-203ENST00000336520 SLIT1O75093 1534 aa17.13■□□□□ 0.33
MRPL55-203ENST00000336520 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
MRPL55-203ENST00000336520 E9PCH4 1651 aa17.13■□□□□ 0.33
MRPL55-203ENST00000336520 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
MRPL55-203ENST00000336520 ADGRB3O60242 1522 aa17.12■□□□□ 0.33
MRPL55-203ENST00000336520 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
MRPL55-203ENST00000336520 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
MRPL55-203ENST00000336520 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
MRPL55-203ENST00000336520 LTKP29376 864 aa17.1■□□□□ 0.33
MRPL55-203ENST00000336520 IQSEC2Q5JU85 1478 aa17.1■□□□□ 0.33
MRPL55-203ENST00000336520 CPS1P31327 1500 aa17.07■□□□□ 0.32
MRPL55-203ENST00000336520 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
MRPL55-203ENST00000336520 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
MRPL55-203ENST00000336520 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
MRPL55-203ENST00000336520 MYO5BQ9ULV0 1848 aa17.03■□□□□ 0.32
MRPL55-203ENST00000336520 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
MRPL55-203ENST00000336520 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-203ENST00000336520 BCANQ96GW7 911 aa17.02■□□□□ 0.32
MRPL55-203ENST00000336520 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
MRPL55-203ENST00000336520 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
MRPL55-203ENST00000336520 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
MRPL55-203ENST00000336520 ZFYVE9O95405 1425 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms