RNA–Protein interactions for RNA: ENST00000335110.5

FAT4-201, Transcript of FAT atypical cadherin 4, humanhuman

TSL 1 (best) BASIC

Gene FAT4, Length 9,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT4-201ENST00000335110 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
FAT4-201ENST00000335110 SMC4Q9NTJ3 1288 aa12.42□□□□□ -0.42
FAT4-201ENST00000335110 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
FAT4-201ENST00000335110 CENPJQ9HC77 1338 aaPredicted RBP12.42□□□□□ -0.42
FAT4-201ENST00000335110 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
FAT4-201ENST00000335110 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
FAT4-201ENST00000335110 ANKRD20A12PQ8NF67 263 aa12.41□□□□□ -0.42
FAT4-201ENST00000335110 ZNF592Q92610 1267 aa12.41□□□□□ -0.42
FAT4-201ENST00000335110 APPP05067 770 aa12.41□□□□□ -0.42
FAT4-201ENST00000335110 HOOK1Q9UJC3 728 aaKnown RBP12.41□□□□□ -0.42
FAT4-201ENST00000335110 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
FAT4-201ENST00000335110 CCDC66A2RUB6 948 aa12.4□□□□□ -0.42
FAT4-201ENST00000335110 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
FAT4-201ENST00000335110 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
FAT4-201ENST00000335110 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
FAT4-201ENST00000335110 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
FAT4-201ENST00000335110 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
FAT4-201ENST00000335110 DCTN1Q14203 1278 aa12.39□□□□□ -0.43
FAT4-201ENST00000335110 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
FAT4-201ENST00000335110 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
FAT4-201ENST00000335110 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
FAT4-201ENST00000335110 HDGFP51858 240 aaKnown RBP12.38□□□□□ -0.43
FAT4-201ENST00000335110 U2AF1L5P0DN76 240 aaPredicted RBP12.38□□□□□ -0.43
FAT4-201ENST00000335110 U2AF1Q01081 240 aaKnown RBP eCLIP12.38□□□□□ -0.43
FAT4-201ENST00000335110 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
FAT4-201ENST00000335110 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
FAT4-201ENST00000335110 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
FAT4-201ENST00000335110 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
FAT4-201ENST00000335110 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
FAT4-201ENST00000335110 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
FAT4-201ENST00000335110 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
FAT4-201ENST00000335110 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
FAT4-201ENST00000335110 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 REC8O95072 547 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 CHMP3Q9Y3E7 222 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 KAT6BQ8WYB5 2073 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
FAT4-201ENST00000335110 TAF7LQ5H9L4 462 aa12.34□□□□□ -0.43
FAT4-201ENST00000335110 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
FAT4-201ENST00000335110 VPS53Q5VIR6 699 aa12.33□□□□□ -0.43
FAT4-201ENST00000335110 H0YHG0 523 aa12.33□□□□□ -0.44
FAT4-201ENST00000335110 MARCH6O60337 910 aa12.33□□□□□ -0.44
FAT4-201ENST00000335110 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
FAT4-201ENST00000335110 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
FAT4-201ENST00000335110 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
FAT4-201ENST00000335110 PDE4AP27815 886 aa12.33□□□□□ -0.44
FAT4-201ENST00000335110 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
FAT4-201ENST00000335110 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
FAT4-201ENST00000335110 NAT10Q9H0A0 1025 aaKnown RBP12.32□□□□□ -0.44
FAT4-201ENST00000335110 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
FAT4-201ENST00000335110 MYO6Q9UM54 1294 aa12.32□□□□□ -0.44
FAT4-201ENST00000335110 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
FAT4-201ENST00000335110 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
FAT4-201ENST00000335110 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
FAT4-201ENST00000335110 MCTP1Q6DN14 999 aa12.31□□□□□ -0.44
FAT4-201ENST00000335110 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
FAT4-201ENST00000335110 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
FAT4-201ENST00000335110 SOX12O15370 315 aa12.3□□□□□ -0.44
FAT4-201ENST00000335110 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
FAT4-201ENST00000335110 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
FAT4-201ENST00000335110 CCP110O43303 1012 aa12.29□□□□□ -0.44
FAT4-201ENST00000335110 NACADO15069 1562 aa12.29□□□□□ -0.44
FAT4-201ENST00000335110 TCEAL9Q9UHQ7 104 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 RUFY2Q8WXA3 655 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 TRIM29Q14134 588 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 LEKR1Q6ZMV7 388 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 TAF3Q5VWG9 929 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 TERF2IPQ9NYB0 399 aa12.28□□□□□ -0.44
FAT4-201ENST00000335110 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.44
FAT4-201ENST00000335110 MYBBP1AQ9BQG0 1328 aaKnown RBP12.27□□□□□ -0.45
FAT4-201ENST00000335110 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
FAT4-201ENST00000335110 NUCB2P80303 420 aa12.27□□□□□ -0.45
FAT4-201ENST00000335110 ZKSCAN1P17029 563 aaPredicted RBP12.27□□□□□ -0.45
FAT4-201ENST00000335110 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.45
FAT4-201ENST00000335110 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
FAT4-201ENST00000335110 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
FAT4-201ENST00000335110 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
FAT4-201ENST00000335110 CHMP5Q9NZZ3 219 aa12.26□□□□□ -0.45
FAT4-201ENST00000335110 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
FAT4-201ENST00000335110 RRP1P56182 461 aaKnown RBP12.26□□□□□ -0.45
FAT4-201ENST00000335110 MRE11P49959 708 aa12.25□□□□□ -0.45
FAT4-201ENST00000335110 CAGE1Q8TC20 777 aa12.25□□□□□ -0.45
FAT4-201ENST00000335110 ZNF330Q9Y3S2 320 aaPredicted RBP12.25□□□□□ -0.45
FAT4-201ENST00000335110 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
FAT4-201ENST00000335110 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
FAT4-201ENST00000335110 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
FAT4-201ENST00000335110 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
FAT4-201ENST00000335110 NAP1L1P55209 391 aaKnown RBP12.24□□□□□ -0.45
FAT4-201ENST00000335110 FOXD4L6Q3SYB3 417 aaPredicted RBP12.24□□□□□ -0.45
FAT4-201ENST00000335110 ANKRD45Q5TZF3 282 aa12.24□□□□□ -0.45
FAT4-201ENST00000335110 FOXD4L3Q6VB84 417 aaPredicted RBP12.24□□□□□ -0.45
FAT4-201ENST00000335110 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
FAT4-201ENST00000335110 E9PSI1 815 aa12.23□□□□□ -0.45
FAT4-201ENST00000335110 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
FAT4-201ENST00000335110 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
FAT4-201ENST00000335110 PKD2Q13563 968 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms