RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 RTEL1-TNFRSF6BF6WH68 1400 aa32.42■■■□□ 2.78
ITM2C-203ENST00000335005 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
ITM2C-203ENST00000335005 ZNF326Q5BKZ1 582 aaKnown RBP32.42■■■□□ 2.78
ITM2C-203ENST00000335005 ABCA9Q8IUA7 1624 aa32.41■■■□□ 2.78
ITM2C-203ENST00000335005 TRAPPC8Q9Y2L5 1435 aa32.4■■■□□ 2.78
ITM2C-203ENST00000335005 DHX29Q7Z478 1369 aaKnown RBP32.4■■■□□ 2.78
ITM2C-203ENST00000335005 LAMC1P11047 1609 aa32.4■■■□□ 2.78
ITM2C-203ENST00000335005 ROCK2O75116 1388 aaKnown RBP32.4■■■□□ 2.78
ITM2C-203ENST00000335005 PRAG1Q86YV5 1406 aa32.39■■■□□ 2.78
ITM2C-203ENST00000335005 ZFYVE16Q7Z3T8 1539 aa32.38■■■□□ 2.77
ITM2C-203ENST00000335005 CARD11Q9BXL7 1154 aa32.35■■■□□ 2.77
ITM2C-203ENST00000335005 DCAF11Q8TEB1 546 aa32.34■■■□□ 2.77
ITM2C-203ENST00000335005 DEPDC5O75140 1603 aa32.33■■■□□ 2.77
ITM2C-203ENST00000335005 A2MP01023 1474 aa32.33■■■□□ 2.77
ITM2C-203ENST00000335005 EIF2AK4Q9P2K8 1649 aaKnown RBP32.32■■■□□ 2.76
ITM2C-203ENST00000335005 E9PCH4 1651 aa32.32■■■□□ 2.76
ITM2C-203ENST00000335005 HNRNPUQ00839 825 aaKnown RBP eCLIP32.31■■■□□ 2.76
ITM2C-203ENST00000335005 INO80Q9ULG1 1556 aaPredicted RBP32.31■■■□□ 2.76
ITM2C-203ENST00000335005 GPRASP1Q5JY77 1395 aa32.3■■■□□ 2.76
ITM2C-203ENST00000335005 CCDC184Q52MB2 194 aa32.3■■■□□ 2.76
ITM2C-203ENST00000335005 KDM2AQ9Y2K7 1162 aa32.27■■■□□ 2.76
ITM2C-203ENST00000335005 FKBP8Q14318 412 aa32.25■■■□□ 2.75
ITM2C-203ENST00000335005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.25■■■□□ 2.75
ITM2C-203ENST00000335005 SPAG9O60271 1321 aaKnown RBP32.25■■■□□ 2.75
ITM2C-203ENST00000335005 PRDM15P57071 1507 aaPredicted RBP32.24■■■□□ 2.75
ITM2C-203ENST00000335005 NEFLP07196 543 aa32.24■■■□□ 2.75
ITM2C-203ENST00000335005 FANCAO15360 1455 aa32.23■■■□□ 2.75
ITM2C-203ENST00000335005 MRS2Q9HD23 443 aa32.23■■■□□ 2.75
ITM2C-203ENST00000335005 ATP7AQ04656 1500 aa32.22■■■□□ 2.75
ITM2C-203ENST00000335005 RNF17Q9BXT8 1623 aaKnown RBP32.2■■■□□ 2.75
ITM2C-203ENST00000335005 TET3O43151 1660 aa32.2■■■□□ 2.75
ITM2C-203ENST00000335005 VWDEQ8N2E2 1590 aa32.2■■■□□ 2.74
ITM2C-203ENST00000335005 ST20-MTHFSA0A0A6YYL1 179 aa32.19■■■□□ 2.74
ITM2C-203ENST00000335005 TRPM2O94759 1503 aa32.19■■■□□ 2.74
ITM2C-203ENST00000335005 SPHKAPQ2M3C7 1700 aa32.19■■■□□ 2.74
ITM2C-203ENST00000335005 CEP152O94986 1710 aa32.18■■■□□ 2.74
ITM2C-203ENST00000335005 ASXL2Q76L83 1435 aa32.15■■■□□ 2.74
ITM2C-203ENST00000335005 ZBED9Q6R2W3 1325 aa32.14■■■□□ 2.74
ITM2C-203ENST00000335005 PTPRTO14522 1441 aa32.14■■■□□ 2.74
ITM2C-203ENST00000335005 AFAP1Q8N556 730 aa32.13■■■□□ 2.73
ITM2C-203ENST00000335005 KTN1Q86UP2 1357 aaKnown RBP32.13■■■□□ 2.73
ITM2C-203ENST00000335005 ADGRL1O94910 1474 aa32.12■■■□□ 2.73
ITM2C-203ENST00000335005 NEURL4Q96JN8 1562 aa32.09■■■□□ 2.73
ITM2C-203ENST00000335005 COL17A1Q9UMD9 1497 aaPredicted RBP32.09■■■□□ 2.73
ITM2C-203ENST00000335005 RGL3Q3MIN7 710 aa32.08■■■□□ 2.73
ITM2C-203ENST00000335005 FAM9BQ8IZU0 186 aa32.08■■■□□ 2.73
ITM2C-203ENST00000335005 MADDQ8WXG6 1647 aa32.08■■■□□ 2.73
ITM2C-203ENST00000335005 MROH1Q8NDA8 1641 aa32.07■■■□□ 2.72
ITM2C-203ENST00000335005 POLR3GLQ9BT43 218 aa32.06■■■□□ 2.72
ITM2C-203ENST00000335005 CLTCL1P53675 1640 aa32.06■■■□□ 2.72
ITM2C-203ENST00000335005 SCAPERQ9BY12 1400 aa32.05■■■□□ 2.72
ITM2C-203ENST00000335005 NBPF1Q3BBV0 1214 aa32.04■■■□□ 2.72
ITM2C-203ENST00000335005 CFAP74Q9C0B2 1584 aa32.03■■■□□ 2.72
ITM2C-203ENST00000335005 KIDINS220Q9ULH0 1771 aa32.03■■■□□ 2.72
ITM2C-203ENST00000335005 IQGAP1P46940 1657 aa32.01■■■□□ 2.71
ITM2C-203ENST00000335005 BCANQ96GW7 911 aa32.01■■■□□ 2.71
ITM2C-203ENST00000335005 STAC3Q96MF2 364 aa32.01■■■□□ 2.71
ITM2C-203ENST00000335005 KANK1Q14678 1352 aa32■■■□□ 2.71
ITM2C-203ENST00000335005 RALBP1Q15311 655 aa31.96■■■□□ 2.71
ITM2C-203ENST00000335005 TESK2Q96S53 571 aa31.96■■■□□ 2.71
ITM2C-203ENST00000335005 BRD4O60885 1362 aaPredicted RBP31.96■■■□□ 2.71
ITM2C-203ENST00000335005 ZNF518AQ6AHZ1 1483 aa31.95■■■□□ 2.71
ITM2C-203ENST00000335005 KIAA1210Q9ULL0 1709 aa31.95■■■□□ 2.71
ITM2C-203ENST00000335005 ERICH6BQ5W0A0 696 aa31.94■■■□□ 2.7
ITM2C-203ENST00000335005 OSCARQ8IYS5 282 aa31.94■■■□□ 2.7
ITM2C-203ENST00000335005 TSHZ2Q9NRE2 1034 aa31.93■■■□□ 2.7
ITM2C-203ENST00000335005 LMTK2Q8IWU2 1503 aa31.92■■■□□ 2.7
ITM2C-203ENST00000335005 MYBBP1AQ9BQG0 1328 aaKnown RBP31.92■■■□□ 2.7
ITM2C-203ENST00000335005 EFCAB6Q5THR3 1501 aa31.92■■■□□ 2.7
ITM2C-203ENST00000335005 PNISRQ8TF01 805 aaKnown RBP31.9■■■□□ 2.7
ITM2C-203ENST00000335005 LRPPRCP42704 1394 aaKnown RBP31.89■■■□□ 2.7
ITM2C-203ENST00000335005 PARD3Q8TEW0 1356 aa31.89■■■□□ 2.7
ITM2C-203ENST00000335005 DISP3Q9P2K9 1392 aa31.89■■■□□ 2.7
ITM2C-203ENST00000335005 WASHC2CQ9Y4E1 1318 aa31.87■■■□□ 2.69
ITM2C-203ENST00000335005 SMG6Q86US8 1419 aaKnown RBP31.86■■■□□ 2.69
ITM2C-203ENST00000335005 KIF1BO60333 1816 aa31.85■■■□□ 2.69
ITM2C-203ENST00000335005 KIF3BO15066 747 aa31.85■■■□□ 2.69
ITM2C-203ENST00000335005 PER1O15534 1290 aaPredicted RBP31.84■■■□□ 2.69
ITM2C-203ENST00000335005 PPRC1Q5VV67 1664 aaKnown RBP31.84■■■□□ 2.69
ITM2C-203ENST00000335005 IFT172Q9UG01 1749 aa31.84■■■□□ 2.69
ITM2C-203ENST00000335005 POGZQ7Z3K3 1410 aa31.84■■■□□ 2.69
ITM2C-203ENST00000335005 NPM1P06748 294 aaKnown RBP eCLIP31.83■■■□□ 2.69
ITM2C-203ENST00000335005 TMC1Q8TDI8 760 aa31.83■■■□□ 2.69
ITM2C-203ENST00000335005 MYOM2P54296 1465 aa31.82■■■□□ 2.68
ITM2C-203ENST00000335005 MLH3Q9UHC1 1453 aa31.82■■■□□ 2.68
ITM2C-203ENST00000335005 TMF1P82094 1093 aa31.82■■■□□ 2.68
ITM2C-203ENST00000335005 HECW2Q9P2P5 1572 aa31.81■■■□□ 2.68
ITM2C-203ENST00000335005 SCAF11Q99590 1463 aaKnown RBP31.81■■■□□ 2.68
ITM2C-203ENST00000335005 CD109Q6YHK3 1445 aa31.8■■■□□ 2.68
ITM2C-203ENST00000335005 MAP3K4Q9Y6R4 1608 aa31.79■■■□□ 2.68
ITM2C-203ENST00000335005 FRMPD1Q5SYB0 1578 aa31.78■■■□□ 2.68
ITM2C-203ENST00000335005 NLRP13Q86W25 1043 aa31.75■■■□□ 2.67
ITM2C-203ENST00000335005 CNGB1Q14028 1251 aaPredicted RBP31.74■■■□□ 2.67
ITM2C-203ENST00000335005 ZMYM4Q5VZL5 1548 aa31.74■■■□□ 2.67
ITM2C-203ENST00000335005 SYNMO15061 1565 aa31.73■■■□□ 2.67
ITM2C-203ENST00000335005 MYT1LQ9UL68 1186 aa31.73■■■□□ 2.67
ITM2C-203ENST00000335005 MROH2AA6NES4 1674 aa31.72■■■□□ 2.67
ITM2C-203ENST00000335005 ABCA6Q8N139 1617 aa31.72■■■□□ 2.67
ITM2C-203ENST00000335005 NEO1Q92859 1461 aa31.72■■■□□ 2.67
ITM2C-203ENST00000335005 INSRP06213 1382 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms