RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 CEP162Q5TB80 1403 aa32.34■■■□□ 2.77
FMR1-202ENST00000334557 TNRQ92752 1358 aa32.33■■■□□ 2.77
FMR1-202ENST00000334557 NEURL4Q96JN8 1562 aa32.31■■■□□ 2.76
FMR1-202ENST00000334557 HSPA1LP34931 641 aa32.3■■■□□ 2.76
FMR1-202ENST00000334557 PIP4K2BP78356 416 aa32.3■■■□□ 2.76
FMR1-202ENST00000334557 SCAF1Q9H7N4 1312 aaKnown RBP32.28■■■□□ 2.76
FMR1-202ENST00000334557 PZPP20742 1482 aa32.28■■■□□ 2.76
FMR1-202ENST00000334557 WASHC2CQ9Y4E1 1318 aa32.27■■■□□ 2.76
FMR1-202ENST00000334557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.27■■■□□ 2.76
FMR1-202ENST00000334557 CCDC141Q6ZP82 1450 aa32.26■■■□□ 2.75
FMR1-202ENST00000334557 SHANK2Q9UPX8 1470 aa32.25■■■□□ 2.75
FMR1-202ENST00000334557 KDM5DQ9BY66 1539 aa32.25■■■□□ 2.75
FMR1-202ENST00000334557 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
FMR1-202ENST00000334557 NCOA2Q15596 1464 aa32.24■■■□□ 2.75
FMR1-202ENST00000334557 POLR1AO95602 1720 aaPredicted RBP32.24■■■□□ 2.75
FMR1-202ENST00000334557 ANKLE2Q86XL3 938 aa32.22■■■□□ 2.75
FMR1-202ENST00000334557 MIA2Q96PC5 1412 aa32.21■■■□□ 2.75
FMR1-202ENST00000334557 CPS1P31327 1500 aa32.2■■■□□ 2.74
FMR1-202ENST00000334557 TOM1O60784 492 aa32.19■■■□□ 2.74
FMR1-202ENST00000334557 RSPH4AQ5TD94 716 aa32.18■■■□□ 2.74
FMR1-202ENST00000334557 THEMISQ8N1K5 641 aaPredicted RBP32.18■■■□□ 2.74
FMR1-202ENST00000334557 VWDEQ8N2E2 1590 aa32.16■■■□□ 2.74
FMR1-202ENST00000334557 FAM135AQ9P2D6 1515 aa32.14■■■□□ 2.74
FMR1-202ENST00000334557 UGGT1Q9NYU2 1555 aa32.14■■■□□ 2.74
FMR1-202ENST00000334557 MED1Q15648 1581 aaPredicted RBP32.12■■■□□ 2.73
FMR1-202ENST00000334557 NLRP1Q9C000 1473 aa32.12■■■□□ 2.73
FMR1-202ENST00000334557 NPHP4O75161 1426 aaPredicted RBP32.12■■■□□ 2.73
FMR1-202ENST00000334557 TSPY4P0CV99 314 aa32.11■■■□□ 2.73
FMR1-202ENST00000334557 TSPY10P0CW01 314 aa32.11■■■□□ 2.73
FMR1-202ENST00000334557 ALKQ9UM73 1620 aa32.11■■■□□ 2.73
FMR1-202ENST00000334557 MED14O60244 1454 aa32.1■■■□□ 2.73
FMR1-202ENST00000334557 ARHGEF5Q12774 1597 aa32.09■■■□□ 2.73
FMR1-202ENST00000334557 DEPDC5O75140 1603 aa32.06■■■□□ 2.72
FMR1-202ENST00000334557 ABCC3O15438 1527 aa32.02■■■□□ 2.72
FMR1-202ENST00000334557 SENP3Q9H4L4 574 aaPredicted RBP32.02■■■□□ 2.72
FMR1-202ENST00000334557 STRCP1A6NGW2 1772 aa32.02■■■□□ 2.72
FMR1-202ENST00000334557 IQGAP1P46940 1657 aa32■■■□□ 2.71
FMR1-202ENST00000334557 RNF17Q9BXT8 1623 aaKnown RBP32■■■□□ 2.71
FMR1-202ENST00000334557 LRRC7Q96NW7 1537 aa31.97■■■□□ 2.71
FMR1-202ENST00000334557 ERVK-7P63135 1459 aa31.97■■■□□ 2.71
FMR1-202ENST00000334557 LRRC9Q6ZRR7 1453 aa31.97■■■□□ 2.71
FMR1-202ENST00000334557 KANK4Q5T7N3 995 aaPredicted RBP31.96■■■□□ 2.71
FMR1-202ENST00000334557 MAST1Q9Y2H9 1570 aa31.94■■■□□ 2.7
FMR1-202ENST00000334557 MROH1Q8NDA8 1641 aa31.94■■■□□ 2.7
FMR1-202ENST00000334557 ZC3H13Q5T200 1668 aaKnown RBP31.9■■■□□ 2.7
FMR1-202ENST00000334557 LTKP29376 864 aa31.89■■■□□ 2.7
FMR1-202ENST00000334557 CFAP65Q6ZU64 1925 aaKnown RBP31.88■■■□□ 2.69
FMR1-202ENST00000334557 PHF23Q9BUL5 403 aaPredicted RBP31.88■■■□□ 2.69
FMR1-202ENST00000334557 CEP152O94986 1710 aa31.88■■■□□ 2.69
FMR1-202ENST00000334557 EIF2AK4Q9P2K8 1649 aaKnown RBP31.87■■■□□ 2.69
FMR1-202ENST00000334557 LOC105371045A0A1W2PR82 267 aa31.87■■■□□ 2.69
FMR1-202ENST00000334557 UBR1Q8IWV7 1749 aa31.86■■■□□ 2.69
FMR1-202ENST00000334557 VPS8Q8N3P4 1428 aa31.85■■■□□ 2.69
FMR1-202ENST00000334557 TXNDC2Q86VQ3 553 aa31.83■■■□□ 2.69
FMR1-202ENST00000334557 SCAF11Q99590 1463 aaKnown RBP31.82■■■□□ 2.68
FMR1-202ENST00000334557 MYOM3Q5VTT5 1437 aa31.81■■■□□ 2.68
FMR1-202ENST00000334557 SYNMO15061 1565 aa31.8■■■□□ 2.68
FMR1-202ENST00000334557 DUOX2Q9NRD8 1548 aa31.79■■■□□ 2.68
FMR1-202ENST00000334557 ARHGAP23Q9P227 1491 aa31.78■■■□□ 2.68
FMR1-202ENST00000334557 RRP7BPQ9NSQ0 103 aa31.77■■■□□ 2.68
FMR1-202ENST00000334557 SLIT1O75093 1534 aa31.75■■■□□ 2.67
FMR1-202ENST00000334557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.75■■■□□ 2.677e-7■■□□□ 12.3
FMR1-202ENST00000334557 RGS17Q9UGC6 210 aaPredicted RBP31.74■■■□□ 2.67
FMR1-202ENST00000334557 KIF15Q9NS87 1388 aa31.73■■■□□ 2.67
FMR1-202ENST00000334557 ARHGAP31Q2M1Z3 1444 aa31.73■■■□□ 2.67
FMR1-202ENST00000334557 XIRP1Q702N8 1843 aaKnown RBP31.72■■■□□ 2.67
FMR1-202ENST00000334557 MAP3K1Q13233 1512 aa31.71■■■□□ 2.67
FMR1-202ENST00000334557 ABCC5O15440 1437 aa31.71■■■□□ 2.67
FMR1-202ENST00000334557 PRDM15P57071 1507 aaPredicted RBP31.7■■■□□ 2.66
FMR1-202ENST00000334557 EID1Q9Y6B2 187 aa31.69■■■□□ 2.66
FMR1-202ENST00000334557 PIK3C2BO00750 1634 aa31.67■■■□□ 2.66
FMR1-202ENST00000334557 TMEM2Q9UHN6 1383 aa31.66■■■□□ 2.66
FMR1-202ENST00000334557 ERBINQ96RT1 1412 aa31.65■■■□□ 2.66
FMR1-202ENST00000334557 IDI1Q13907 227 aa31.64■■■□□ 2.66
FMR1-202ENST00000334557 RBM33Q96EV2 1170 aaKnown RBP31.63■■■□□ 2.65
FMR1-202ENST00000334557 STAG3Q9UJ98 1225 aa31.62■■■□□ 2.65
FMR1-202ENST00000334557 CROCC2H7BZ55 1655 aa31.6■■■□□ 2.65
FMR1-202ENST00000334557 TMEM94Q12767 1356 aa31.59■■■□□ 2.65
FMR1-202ENST00000334557 SLC26A8Q96RN1 970 aa31.59■■■□□ 2.65
FMR1-202ENST00000334557 CHIC2Q9UKJ5 165 aa31.59■■■□□ 2.65
FMR1-202ENST00000334557 DAPK1P53355 1430 aa31.58■■■□□ 2.65
FMR1-202ENST00000334557 PTPN23Q9H3S7 1636 aa31.58■■■□□ 2.65
FMR1-202ENST00000334557 FAM135BQ49AJ0 1406 aa31.58■■■□□ 2.65
FMR1-202ENST00000334557 KCNA6P17658 529 aa31.55■■■□□ 2.64
FMR1-202ENST00000334557 KANK1Q14678 1352 aa31.55■■■□□ 2.64
FMR1-202ENST00000334557 EFCAB6Q5THR3 1501 aa31.54■■■□□ 2.64
FMR1-202ENST00000334557 TET3O43151 1660 aa31.53■■■□□ 2.64
FMR1-202ENST00000334557 PROSER2Q86WR7 435 aaPredicted RBP31.52■■■□□ 2.64
FMR1-202ENST00000334557 POTEAQ6S8J7 498 aa31.51■■■□□ 2.63
FMR1-202ENST00000334557 LMTK2Q8IWU2 1503 aa31.49■■■□□ 2.63
FMR1-202ENST00000334557 FGD6Q6ZV73 1430 aa31.48■■■□□ 2.63
FMR1-202ENST00000334557 NOS1P29475 1434 aa31.47■■■□□ 2.63
FMR1-202ENST00000334557 KDM5AP29375 1690 aaKnown RBP31.47■■■□□ 2.63
FMR1-202ENST00000334557 ANKRD30AQ9BXX3 1397 aa31.46■■■□□ 2.63
FMR1-202ENST00000334557 ROBO1Q9Y6N7 1651 aa31.45■■■□□ 2.63
FMR1-202ENST00000334557 APLP2Q06481 763 aa31.42■■■□□ 2.62
FMR1-202ENST00000334557 BCANQ96GW7 911 aa31.4■■■□□ 2.62
FMR1-202ENST00000334557 ADGRB3O60242 1522 aa31.39■■■□□ 2.62
FMR1-202ENST00000334557 SLC52A1Q9NWF4 448 aa31.38■■■□□ 2.61
FMR1-202ENST00000334557 NWD1Q149M9 1564 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms