RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 BCL11BQ9C0K0 894 aaPredicted RBP8.07□□□□□ -1.12
PTBP3-202ENST00000334318 CWC22Q9HCG8 908 aaKnown RBP8.07□□□□□ -1.12
PTBP3-202ENST00000334318 FRAT1Q92837 279 aaPredicted RBP8.07□□□□□ -1.12
PTBP3-202ENST00000334318 ANKRD30AQ9BXX3 1397 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 NCKAP5LQ9HCH0 1330 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 TMF1P82094 1093 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 SCAPERQ9BY12 1400 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 SETD5Q9C0A6 1442 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 BICDL1Q6ZP65 573 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 HSPA5P11021 654 aaKnown RBP8.06□□□□□ -1.12
PTBP3-202ENST00000334318 CCER2I3L3R5 266 aa8.06□□□□□ -1.12
PTBP3-202ENST00000334318 C1orf141Q5JVX7 400 aa8.05□□□□□ -1.12
PTBP3-202ENST00000334318 FBXO31Q5XUX0 539 aaPredicted RBP8.05□□□□□ -1.12
PTBP3-202ENST00000334318 POGZQ7Z3K3 1410 aa8.05□□□□□ -1.12
PTBP3-202ENST00000334318 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
PTBP3-202ENST00000334318 NLRP6P59044 892 aa8.05□□□□□ -1.12
PTBP3-202ENST00000334318 ABTB2Q8N961 1025 aa8.05□□□□□ -1.12
PTBP3-202ENST00000334318 DISP3Q9P2K9 1392 aa8.04□□□□□ -1.12
PTBP3-202ENST00000334318 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
PTBP3-202ENST00000334318 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTBP3-202ENST00000334318 LMTK3Q96Q04 1460 aa8.04□□□□□ -1.12
PTBP3-202ENST00000334318 RAPGEF2Q9Y4G8 1499 aa8.04□□□□□ -1.12
PTBP3-202ENST00000334318 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
PTBP3-202ENST00000334318 DDRGK1Q96HY6 314 aa8.04□□□□□ -1.12
PTBP3-202ENST00000334318 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTBP3-202ENST00000334318 RAB3GAP2Q9H2M9 1393 aa8.04□□□□□ -1.12
PTBP3-202ENST00000334318 TTC5Q8N0Z6 440 aa8.03□□□□□ -1.12
PTBP3-202ENST00000334318 EIF2S2P20042 333 aaKnown RBP8.03□□□□□ -1.12
PTBP3-202ENST00000334318 RGS3P49796 1198 aa8.03□□□□□ -1.12
PTBP3-202ENST00000334318 ECM2O94769 699 aaPredicted RBP8.02□□□□□ -1.12
PTBP3-202ENST00000334318 BECN1Q14457 450 aa8.02□□□□□ -1.13
PTBP3-202ENST00000334318 RAPGEF4Q8WZA2 1011 aa8.02□□□□□ -1.13
PTBP3-202ENST00000334318 GRIN2BQ13224 1484 aa8.02□□□□□ -1.13
PTBP3-202ENST00000334318 COG3Q96JB2 828 aa8.02□□□□□ -1.13
PTBP3-202ENST00000334318 IFT140Q96RY7 1462 aa8.01□□□□□ -1.13
PTBP3-202ENST00000334318 PHF14O94880 888 aa8.01□□□□□ -1.13
PTBP3-202ENST00000334318 GORABQ5T7V8 394 aa8.01□□□□□ -1.13
PTBP3-202ENST00000334318 CABP2Q9NPB3 220 aa8.01□□□□□ -1.13
PTBP3-202ENST00000334318 TERF2IPQ9NYB0 399 aa8.01□□□□□ -1.13
PTBP3-202ENST00000334318 ELL2O00472 640 aaPredicted RBP8.01□□□□□ -1.13
PTBP3-202ENST00000334318 MPHOSPH9Q99550 1183 aa8□□□□□ -1.13
PTBP3-202ENST00000334318 NCAPD3P42695 1498 aa8□□□□□ -1.13
PTBP3-202ENST00000334318 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
PTBP3-202ENST00000334318 CD109Q6YHK3 1445 aa8□□□□□ -1.13
PTBP3-202ENST00000334318 ROCK2O75116 1388 aaKnown RBP8□□□□□ -1.13
PTBP3-202ENST00000334318 SLC4A10Q6U841 1118 aa8□□□□□ -1.13
PTBP3-202ENST00000334318 FOXO3O43524 673 aa7.99□□□□□ -1.13
PTBP3-202ENST00000334318 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
PTBP3-202ENST00000334318 ARHGAP35Q9NRY4 1499 aa7.99□□□□□ -1.13
PTBP3-202ENST00000334318 NOP58Q9Y2X3 529 aaKnown RBP7.99□□□□□ -1.13
PTBP3-202ENST00000334318 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
PTBP3-202ENST00000334318 GPRASP1Q5JY77 1395 aa7.99□□□□□ -1.13
PTBP3-202ENST00000334318 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
PTBP3-202ENST00000334318 ARHGAP5Q13017 1502 aa7.98□□□□□ -1.13
PTBP3-202ENST00000334318 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
PTBP3-202ENST00000334318 KCNJ4P48050 445 aa7.97□□□□□ -1.13
PTBP3-202ENST00000334318 TEFQ10587 303 aa7.97□□□□□ -1.13
PTBP3-202ENST00000334318 SMARCA4P51532 1647 aa7.97□□□□□ -1.13
PTBP3-202ENST00000334318 AIMP1Q12904 312 aaKnown RBP7.97□□□□□ -1.13
PTBP3-202ENST00000334318 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
PTBP3-202ENST00000334318 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.13
PTBP3-202ENST00000334318 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.13
PTBP3-202ENST00000334318 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.13
PTBP3-202ENST00000334318 CHRNA2Q15822 529 aa7.96□□□□□ -1.14
PTBP3-202ENST00000334318 TOP2AP11388 1531 aaKnown RBP7.96□□□□□ -1.14
PTBP3-202ENST00000334318 RUSC2Q8N2Y8 1516 aa7.96□□□□□ -1.14
PTBP3-202ENST00000334318 CCDC18Q5T9S5 1454 aa7.96□□□□□ -1.14
PTBP3-202ENST00000334318 C16orf71Q8IYS4 520 aaPredicted RBP7.96□□□□□ -1.14
PTBP3-202ENST00000334318 ACSBG1Q96GR2 724 aa7.96□□□□□ -1.14
PTBP3-202ENST00000334318 TOMM22Q9NS69 142 aa7.96□□□□□ -1.14
PTBP3-202ENST00000334318 IGF1RP08069 1367 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 VPS53Q5VIR6 699 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 ZNF608Q9ULD9 1512 aaPredicted RBP7.95□□□□□ -1.14
PTBP3-202ENST00000334318 FGD1P98174 961 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 PLIN1O60240 522 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 RSPH4AQ5TD94 716 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
PTBP3-202ENST00000334318 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 CLEC11AQ9Y240 323 aa7.95□□□□□ -1.14
PTBP3-202ENST00000334318 PRAM1Q96QH2 718 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 TRIM34Q9BYJ4 488 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 DHX57Q6P158 1386 aaKnown RBP7.94□□□□□ -1.14
PTBP3-202ENST00000334318 GOLGA6L22H0YM25 854 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 CABLES1Q8TDN4 633 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 PRDM2Q13029 1718 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
PTBP3-202ENST00000334318 IBSPP21815 317 aaPredicted RBP7.93□□□□□ -1.14
PTBP3-202ENST00000334318 CTDP1Q9Y5B0 961 aaPredicted RBP7.93□□□□□ -1.14
PTBP3-202ENST00000334318 NCLP19338 710 aaKnown RBP7.93□□□□□ -1.14
PTBP3-202ENST00000334318 HMOX1P09601 288 aa7.93□□□□□ -1.14
PTBP3-202ENST00000334318 TRIM44Q96DX7 344 aaPredicted RBP7.92□□□□□ -1.14
PTBP3-202ENST00000334318 TTLL12Q14166 644 aaPredicted RBP7.92□□□□□ -1.14
PTBP3-202ENST00000334318 RTN4Q9NQC3 1192 aaKnown RBP7.92□□□□□ -1.14
PTBP3-202ENST00000334318 ERICH6BQ5W0A0 696 aa7.92□□□□□ -1.14
PTBP3-202ENST00000334318 VPS37DQ86XT2 251 aa7.92□□□□□ -1.14
PTBP3-202ENST00000334318 CCAR1Q8IX12 1150 aaKnown RBP7.92□□□□□ -1.14
PTBP3-202ENST00000334318 FYB1O15117 783 aa7.92□□□□□ -1.14
PTBP3-202ENST00000334318 WAPLQ7Z5K2 1190 aa7.92□□□□□ -1.14
PTBP3-202ENST00000334318 GLIPR1L2Q4G1C9 344 aa7.92□□□□□ -1.14
PTBP3-202ENST00000334318 STK31Q9BXU1 1019 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms