RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 KDM5CP41229 1560 aa15.13■□□□□ 0.01
AP1S3-201ENST00000334271 ZFYVE16Q7Z3T8 1539 aa15.13■□□□□ 0.01
AP1S3-201ENST00000334271 KDM6BO15054 1643 aa15.12■□□□□ 0.01
AP1S3-201ENST00000334271 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
AP1S3-201ENST00000334271 TEX14Q8IWB6 1497 aa15.11■□□□□ 0.01
AP1S3-201ENST00000334271 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
AP1S3-201ENST00000334271 ATP7AQ04656 1500 aa15.1■□□□□ 0.01
AP1S3-201ENST00000334271 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
AP1S3-201ENST00000334271 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
AP1S3-201ENST00000334271 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
AP1S3-201ENST00000334271 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
AP1S3-201ENST00000334271 POGZQ7Z3K3 1410 aa15.08■□□□□ 0
AP1S3-201ENST00000334271 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
AP1S3-201ENST00000334271 PZPP20742 1482 aa15.07■□□□□ 0
AP1S3-201ENST00000334271 IQGAP3Q86VI3 1631 aa15.07■□□□□ 0
AP1S3-201ENST00000334271 MPHOSPH9Q99550 1183 aa15.07■□□□□ 0
AP1S3-201ENST00000334271 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
AP1S3-201ENST00000334271 DEPDC5O75140 1603 aa15.06■□□□□ 0
AP1S3-201ENST00000334271 HECW2Q9P2P5 1572 aa15.05■□□□□ -0
AP1S3-201ENST00000334271 DENND4BO75064 1496 aaPredicted RBP15.05■□□□□ -0
AP1S3-201ENST00000334271 TRIM52Q96A61 297 aa15.04■□□□□ -0
AP1S3-201ENST00000334271 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
AP1S3-201ENST00000334271 KIDINS220Q9ULH0 1771 aa15.03■□□□□ -0
AP1S3-201ENST00000334271 PDE4CQ08493 712 aa15.02■□□□□ -0
AP1S3-201ENST00000334271 RICTORQ6R327 1708 aa15.02□□□□□ -0.01
AP1S3-201ENST00000334271 DHX29Q7Z478 1369 aaKnown RBP15.02□□□□□ -0.01
AP1S3-201ENST00000334271 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
AP1S3-201ENST00000334271 FAM135AQ9P2D6 1515 aa15.01□□□□□ -0.01
AP1S3-201ENST00000334271 KIF13AQ9H1H9 1805 aa15□□□□□ -0.01
AP1S3-201ENST00000334271 PPRC1Q5VV67 1664 aaKnown RBP15□□□□□ -0.01
AP1S3-201ENST00000334271 NUP155O75694 1391 aa14.99□□□□□ -0.01
AP1S3-201ENST00000334271 ATP10AO60312 1499 aa14.99□□□□□ -0.01
AP1S3-201ENST00000334271 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
AP1S3-201ENST00000334271 RNF17Q9BXT8 1623 aaKnown RBP14.99□□□□□ -0.01
AP1S3-201ENST00000334271 VWDEQ8N2E2 1590 aa14.99□□□□□ -0.01
AP1S3-201ENST00000334271 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
AP1S3-201ENST00000334271 PRDM15P57071 1507 aaPredicted RBP14.98□□□□□ -0.01
AP1S3-201ENST00000334271 AFAP1Q8N556 730 aa14.97□□□□□ -0.01
AP1S3-201ENST00000334271 TONSLQ96HA7 1378 aa14.96□□□□□ -0.01
AP1S3-201ENST00000334271 A2MP01023 1474 aa14.96□□□□□ -0.01
AP1S3-201ENST00000334271 LMTK2Q8IWU2 1503 aa14.96□□□□□ -0.02
AP1S3-201ENST00000334271 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.02
AP1S3-201ENST00000334271 TET3O43151 1660 aa14.95□□□□□ -0.02
AP1S3-201ENST00000334271 KANK1Q14678 1352 aa14.95□□□□□ -0.02
AP1S3-201ENST00000334271 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
AP1S3-201ENST00000334271 NEURL4Q96JN8 1562 aa14.93□□□□□ -0.02
AP1S3-201ENST00000334271 FRMPD1Q5SYB0 1578 aa14.92□□□□□ -0.02
AP1S3-201ENST00000334271 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
AP1S3-201ENST00000334271 ABCA6Q8N139 1617 aa14.91□□□□□ -0.02
AP1S3-201ENST00000334271 PPP1R15AO75807 674 aaPredicted RBP14.91□□□□□ -0.02
AP1S3-201ENST00000334271 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
AP1S3-201ENST00000334271 NEFLP07196 543 aa14.9□□□□□ -0.02
AP1S3-201ENST00000334271 PKD2Q13563 968 aa14.9□□□□□ -0.02
AP1S3-201ENST00000334271 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
AP1S3-201ENST00000334271 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
AP1S3-201ENST00000334271 AGLP35573 1532 aa14.9□□□□□ -0.02
AP1S3-201ENST00000334271 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
AP1S3-201ENST00000334271 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
AP1S3-201ENST00000334271 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
AP1S3-201ENST00000334271 STAC3Q96MF2 364 aa14.88□□□□□ -0.03
AP1S3-201ENST00000334271 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
AP1S3-201ENST00000334271 PKNOX2Q96KN3 472 aa14.87□□□□□ -0.03
AP1S3-201ENST00000334271 PTPRTO14522 1441 aa14.86□□□□□ -0.03
AP1S3-201ENST00000334271 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
AP1S3-201ENST00000334271 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 TRPM2O94759 1503 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 E9PCH4 1651 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 DHX37Q8IY37 1157 aaKnown RBP14.85□□□□□ -0.03
AP1S3-201ENST00000334271 EFCAB6Q5THR3 1501 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
AP1S3-201ENST00000334271 BRD2P25440 801 aaKnown RBP14.84□□□□□ -0.03
AP1S3-201ENST00000334271 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
AP1S3-201ENST00000334271 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.03
AP1S3-201ENST00000334271 UHRF1BP1Q6BDS2 1440 aa14.83□□□□□ -0.04
AP1S3-201ENST00000334271 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
AP1S3-201ENST00000334271 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
AP1S3-201ENST00000334271 ARHGAP31Q2M1Z3 1444 aa14.82□□□□□ -0.04
AP1S3-201ENST00000334271 KIF3BO15066 747 aa14.81□□□□□ -0.04
AP1S3-201ENST00000334271 DNAJC5Q9H3Z4 198 aa14.81□□□□□ -0.04
AP1S3-201ENST00000334271 CEP152O94986 1710 aa14.8□□□□□ -0.04
AP1S3-201ENST00000334271 PLA2R1Q13018 1463 aa14.79□□□□□ -0.04
AP1S3-201ENST00000334271 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
AP1S3-201ENST00000334271 ABCC3O15438 1527 aa14.78□□□□□ -0.04
AP1S3-201ENST00000334271 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
AP1S3-201ENST00000334271 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
AP1S3-201ENST00000334271 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
AP1S3-201ENST00000334271 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
AP1S3-201ENST00000334271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
AP1S3-201ENST00000334271 FOXD1Q16676 465 aa14.75□□□□□ -0.05
AP1S3-201ENST00000334271 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
AP1S3-201ENST00000334271 LAMC1P11047 1609 aa14.74□□□□□ -0.05
AP1S3-201ENST00000334271 RALGAPBQ86X10 1494 aa14.72□□□□□ -0.05
AP1S3-201ENST00000334271 KIF1BO60333 1816 aa14.72□□□□□ -0.05
AP1S3-201ENST00000334271 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
AP1S3-201ENST00000334271 NOS1P29475 1434 aa14.7□□□□□ -0.06
AP1S3-201ENST00000334271 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
AP1S3-201ENST00000334271 PIK3C2BO00750 1634 aa14.69□□□□□ -0.06
AP1S3-201ENST00000334271 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
AP1S3-201ENST00000334271 WASHC2CQ9Y4E1 1318 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms