RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
KPNA4-201ENST00000334256 TTC16Q8NEE8 873 aa15.87■□□□□ 0.13
KPNA4-201ENST00000334256 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
KPNA4-201ENST00000334256 AMPHP49418 695 aa15.85■□□□□ 0.13
KPNA4-201ENST00000334256 AKAP17AQ02040 695 aaKnown RBP15.85■□□□□ 0.13
KPNA4-201ENST00000334256 HSCBQ8IWL3 235 aa15.85■□□□□ 0.13
KPNA4-201ENST00000334256 NOP58Q9Y2X3 529 aaKnown RBP15.84■□□□□ 0.13
KPNA4-201ENST00000334256 CT47A1Q5JQC4 288 aaPredicted RBP15.84■□□□□ 0.13
KPNA4-201ENST00000334256 WDR78Q5VTH9 848 aa15.83■□□□□ 0.12
KPNA4-201ENST00000334256 SKIDA1Q1XH10 827 aa15.83■□□□□ 0.12
KPNA4-201ENST00000334256 TTLL12Q14166 644 aaPredicted RBP15.82■□□□□ 0.12
KPNA4-201ENST00000334256 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
KPNA4-201ENST00000334256 TPM4P67936 248 aa15.82■□□□□ 0.12
KPNA4-201ENST00000334256 CBX1P83916 185 aa15.81■□□□□ 0.12
KPNA4-201ENST00000334256 FOXD4L6Q3SYB3 417 aaPredicted RBP15.81■□□□□ 0.12
KPNA4-201ENST00000334256 FOXD4L3Q6VB84 417 aaPredicted RBP15.81■□□□□ 0.12
KPNA4-201ENST00000334256 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
KPNA4-201ENST00000334256 ATP2B2Q01814 1243 aa15.81■□□□□ 0.12
KPNA4-201ENST00000334256 KDM4AO75164 1064 aa15.8■□□□□ 0.12
KPNA4-201ENST00000334256 CCDC27Q2M243 656 aa15.8■□□□□ 0.12
KPNA4-201ENST00000334256 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
KPNA4-201ENST00000334256 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
KPNA4-201ENST00000334256 PLIN1O60240 522 aa15.79■□□□□ 0.12
KPNA4-201ENST00000334256 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
KPNA4-201ENST00000334256 RBM5P52756 815 aaKnown RBP eCLIP15.79■□□□□ 0.12
KPNA4-201ENST00000334256 SF3A1Q15459 793 aaKnown RBP15.78■□□□□ 0.12
KPNA4-201ENST00000334256 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.12
KPNA4-201ENST00000334256 GPATCH3Q96I76 525 aa15.77■□□□□ 0.11
KPNA4-201ENST00000334256 PSMD1Q99460 953 aa15.76■□□□□ 0.11
KPNA4-201ENST00000334256 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
KPNA4-201ENST00000334256 ZNF592Q92610 1267 aa15.75■□□□□ 0.11
KPNA4-201ENST00000334256 MIER1Q8N108 512 aa15.75■□□□□ 0.11
KPNA4-201ENST00000334256 TPM3P06753 285 aa15.75■□□□□ 0.11
KPNA4-201ENST00000334256 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
KPNA4-201ENST00000334256 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
KPNA4-201ENST00000334256 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
KPNA4-201ENST00000334256 CCDC34Q96HJ3 373 aa15.74■□□□□ 0.11
KPNA4-201ENST00000334256 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
KPNA4-201ENST00000334256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
KPNA4-201ENST00000334256 HDGFL2Q7Z4V5 671 aaPredicted RBP15.74■□□□□ 0.11
KPNA4-201ENST00000334256 RFX1P22670 979 aa15.73■□□□□ 0.11
KPNA4-201ENST00000334256 CRBNQ96SW2 442 aa15.72■□□□□ 0.11
KPNA4-201ENST00000334256 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
KPNA4-201ENST00000334256 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
KPNA4-201ENST00000334256 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
KPNA4-201ENST00000334256 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
KPNA4-201ENST00000334256 MPHOSPH10O00566 681 aaKnown RBP15.71■□□□□ 0.11
KPNA4-201ENST00000334256 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
KPNA4-201ENST00000334256 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
KPNA4-201ENST00000334256 TPM2P07951 284 aa15.69■□□□□ 0.1
KPNA4-201ENST00000334256 STK31Q9BXU1 1019 aa15.69■□□□□ 0.1
KPNA4-201ENST00000334256 HSP90AB2PQ58FF8 381 aa15.69■□□□□ 0.1
KPNA4-201ENST00000334256 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
KPNA4-201ENST00000334256 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
KPNA4-201ENST00000334256 PSME1Q06323 249 aa15.68■□□□□ 0.1
KPNA4-201ENST00000334256 SYNE3Q6ZMZ3 975 aa15.68■□□□□ 0.1
KPNA4-201ENST00000334256 MAP7D2Q96T17 732 aa15.68■□□□□ 0.1
KPNA4-201ENST00000334256 KCNA4P22459 653 aa15.67■□□□□ 0.1
KPNA4-201ENST00000334256 FOSBP53539 338 aa15.67■□□□□ 0.1
KPNA4-201ENST00000334256 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
KPNA4-201ENST00000334256 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
KPNA4-201ENST00000334256 STRN4Q9NRL3 753 aa15.67■□□□□ 0.1
KPNA4-201ENST00000334256 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 CHMP4CQ96CF2 233 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 EIF2S2P20042 333 aaKnown RBP15.66■□□□□ 0.1
KPNA4-201ENST00000334256 ATF3P18847 181 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 WWC3Q9ULE0 1092 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 ZMYND15Q9H091 742 aa15.66■□□□□ 0.1
KPNA4-201ENST00000334256 WDHD1O75717 1129 aaPredicted RBP15.65■□□□□ 0.1
KPNA4-201ENST00000334256 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
KPNA4-201ENST00000334256 E9PSI1 815 aa15.65■□□□□ 0.1
KPNA4-201ENST00000334256 NEBLO76041 1014 aa15.65■□□□□ 0.1
KPNA4-201ENST00000334256 MCTP1Q6DN14 999 aa15.65■□□□□ 0.1
KPNA4-201ENST00000334256 CHMP4BQ9H444 224 aaKnown RBP15.65■□□□□ 0.1
KPNA4-201ENST00000334256 EPS15P42566 896 aa15.64■□□□□ 0.09
KPNA4-201ENST00000334256 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
KPNA4-201ENST00000334256 H3BQV1 296 aa15.63■□□□□ 0.09
KPNA4-201ENST00000334256 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
KPNA4-201ENST00000334256 KANK1Q14678 1352 aa15.63■□□□□ 0.09
KPNA4-201ENST00000334256 ZNF219Q9P2Y4 722 aaPredicted RBP15.63■□□□□ 0.09
KPNA4-201ENST00000334256 EP400NLQ6ZTU2 488 aa15.62■□□□□ 0.09
KPNA4-201ENST00000334256 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
KPNA4-201ENST00000334256 ANKRD62A6NC57 917 aa15.61■□□□□ 0.09
KPNA4-201ENST00000334256 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
KPNA4-201ENST00000334256 HSP90AB3PQ58FF7 597 aa15.61■□□□□ 0.09
KPNA4-201ENST00000334256 ZSCAN29Q8IWY8 852 aaPredicted RBP15.6■□□□□ 0.09
KPNA4-201ENST00000334256 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
KPNA4-201ENST00000334256 NFXL1Q6ZNB6 911 aa15.6■□□□□ 0.09
KPNA4-201ENST00000334256 ITPRIPQ8IWB1 547 aa15.6■□□□□ 0.09
KPNA4-201ENST00000334256 DRC1Q96MC2 740 aa15.6■□□□□ 0.09
KPNA4-201ENST00000334256 FAM184AQ8NB25 1140 aa15.59■□□□□ 0.09
KPNA4-201ENST00000334256 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
KPNA4-201ENST00000334256 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.096e-6■■■■□ 22.1
KPNA4-201ENST00000334256 RILPL2Q969X0 211 aa15.59■□□□□ 0.09
KPNA4-201ENST00000334256 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
KPNA4-201ENST00000334256 ZNF526Q8TF50 670 aaPredicted RBP15.57■□□□□ 0.08
KPNA4-201ENST00000334256 MFAP1P55081 439 aaKnown RBP15.57■□□□□ 0.08
KPNA4-201ENST00000334256 NEFHP12036 1026 aa15.56■□□□□ 0.08
KPNA4-201ENST00000334256 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms