RNA–Protein interactions for RNA: ENST00000333722.9

C12orf56-201, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best) BASIC

Gene C12orf56, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-201ENST00000333722 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
C12orf56-201ENST00000333722 TMEM132EQ6IEE7 984 aa17.4■□□□□ 0.38
C12orf56-201ENST00000333722 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
C12orf56-201ENST00000333722 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
C12orf56-201ENST00000333722 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
C12orf56-201ENST00000333722 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
C12orf56-201ENST00000333722 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
C12orf56-201ENST00000333722 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
C12orf56-201ENST00000333722 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
C12orf56-201ENST00000333722 NUP160Q12769 1436 aa17.36■□□□□ 0.37
C12orf56-201ENST00000333722 CDCA8Q53HL2 280 aa17.35■□□□□ 0.37
C12orf56-201ENST00000333722 KIF14Q15058 1648 aa17.34■□□□□ 0.37
C12orf56-201ENST00000333722 PLIN1O60240 522 aa17.34■□□□□ 0.37
C12orf56-201ENST00000333722 POGKQ9P215 609 aa17.34■□□□□ 0.37
C12orf56-201ENST00000333722 NLRP13Q86W25 1043 aa17.34■□□□□ 0.37
C12orf56-201ENST00000333722 RALBP1Q15311 655 aa17.33■□□□□ 0.37
C12orf56-201ENST00000333722 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
C12orf56-201ENST00000333722 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
C12orf56-201ENST00000333722 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
C12orf56-201ENST00000333722 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
C12orf56-201ENST00000333722 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
C12orf56-201ENST00000333722 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
C12orf56-201ENST00000333722 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
C12orf56-201ENST00000333722 ZBED9Q6R2W3 1325 aa17.29■□□□□ 0.36
C12orf56-201ENST00000333722 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
C12orf56-201ENST00000333722 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
C12orf56-201ENST00000333722 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
C12orf56-201ENST00000333722 PZPP20742 1482 aa17.27■□□□□ 0.36
C12orf56-201ENST00000333722 SOX12O15370 315 aa17.27■□□□□ 0.35
C12orf56-201ENST00000333722 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.35
C12orf56-201ENST00000333722 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.35
C12orf56-201ENST00000333722 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
C12orf56-201ENST00000333722 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
C12orf56-201ENST00000333722 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
C12orf56-201ENST00000333722 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
C12orf56-201ENST00000333722 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
C12orf56-201ENST00000333722 NBR1Q14596 966 aa17.23■□□□□ 0.35
C12orf56-201ENST00000333722 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
C12orf56-201ENST00000333722 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
C12orf56-201ENST00000333722 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
C12orf56-201ENST00000333722 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
C12orf56-201ENST00000333722 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
C12orf56-201ENST00000333722 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
C12orf56-201ENST00000333722 DENND4BO75064 1496 aaPredicted RBP17.19■□□□□ 0.34
C12orf56-201ENST00000333722 NEFMP07197 916 aa17.19■□□□□ 0.34
C12orf56-201ENST00000333722 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
C12orf56-201ENST00000333722 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
C12orf56-201ENST00000333722 APAF1O14727 1248 aa17.18■□□□□ 0.34
C12orf56-201ENST00000333722 RGS3P49796 1198 aa17.18■□□□□ 0.34
C12orf56-201ENST00000333722 ADGRF5Q8IZF2 1346 aa17.18■□□□□ 0.34
C12orf56-201ENST00000333722 ERCC6L2Q5T890 1561 aa17.18■□□□□ 0.34
C12orf56-201ENST00000333722 DNMT1P26358 1616 aaKnown RBP17.18■□□□□ 0.34
C12orf56-201ENST00000333722 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
C12orf56-201ENST00000333722 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
C12orf56-201ENST00000333722 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
C12orf56-201ENST00000333722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
C12orf56-201ENST00000333722 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
C12orf56-201ENST00000333722 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
C12orf56-201ENST00000333722 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.33
C12orf56-201ENST00000333722 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
C12orf56-201ENST00000333722 PLCH2O75038 1416 aa17.13■□□□□ 0.33
C12orf56-201ENST00000333722 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
C12orf56-201ENST00000333722 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
C12orf56-201ENST00000333722 FANCAO15360 1455 aa17.12■□□□□ 0.33
C12orf56-201ENST00000333722 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
C12orf56-201ENST00000333722 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
C12orf56-201ENST00000333722 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
C12orf56-201ENST00000333722 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
C12orf56-201ENST00000333722 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
C12orf56-201ENST00000333722 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
C12orf56-201ENST00000333722 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
C12orf56-201ENST00000333722 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
C12orf56-201ENST00000333722 CD109Q6YHK3 1445 aa17.1■□□□□ 0.33
C12orf56-201ENST00000333722 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
C12orf56-201ENST00000333722 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
C12orf56-201ENST00000333722 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
C12orf56-201ENST00000333722 GOLGA2Q08379 1002 aa17.09■□□□□ 0.33
C12orf56-201ENST00000333722 MBD5Q9P267 1494 aa17.09■□□□□ 0.33
C12orf56-201ENST00000333722 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
C12orf56-201ENST00000333722 SKAP1Q86WV1 359 aa17.08■□□□□ 0.33
C12orf56-201ENST00000333722 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
C12orf56-201ENST00000333722 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
C12orf56-201ENST00000333722 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
C12orf56-201ENST00000333722 ASXL2Q76L83 1435 aa17.07■□□□□ 0.32
C12orf56-201ENST00000333722 TESK2Q96S53 571 aa17.07■□□□□ 0.32
C12orf56-201ENST00000333722 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
C12orf56-201ENST00000333722 ABCA8O94911 1581 aa17.06■□□□□ 0.32
C12orf56-201ENST00000333722 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
C12orf56-201ENST00000333722 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
C12orf56-201ENST00000333722 MAPK8IP3Q9UPT6 1336 aa17.04■□□□□ 0.32
C12orf56-201ENST00000333722 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
C12orf56-201ENST00000333722 IDI1Q13907 227 aa17.03■□□□□ 0.32
C12orf56-201ENST00000333722 DHX29Q7Z478 1369 aaKnown RBP17.03■□□□□ 0.32
C12orf56-201ENST00000333722 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
C12orf56-201ENST00000333722 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.32
C12orf56-201ENST00000333722 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
C12orf56-201ENST00000333722 MTHFSP49914 203 aa17.02■□□□□ 0.32
C12orf56-201ENST00000333722 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
C12orf56-201ENST00000333722 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.01■□□□□ 0.31
C12orf56-201ENST00000333722 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms