RNA–Protein interactions for RNA: ENST00000332914.10

LMO3-203, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-203ENST00000332914 ABCA6Q8N139 1617 aa17.14■□□□□ 0.33
LMO3-203ENST00000332914 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
LMO3-203ENST00000332914 ATP10AO60312 1499 aa17.14■□□□□ 0.33
LMO3-203ENST00000332914 KDM5CP41229 1560 aa17.14■□□□□ 0.33
LMO3-203ENST00000332914 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
LMO3-203ENST00000332914 DIP2CQ9Y2E4 1556 aa17.13■□□□□ 0.33
LMO3-203ENST00000332914 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
LMO3-203ENST00000332914 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
LMO3-203ENST00000332914 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
LMO3-203ENST00000332914 ABCC1P33527 1531 aa17.11■□□□□ 0.33
LMO3-203ENST00000332914 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
LMO3-203ENST00000332914 HSPA1LP34931 641 aa17.08■□□□□ 0.32
LMO3-203ENST00000332914 SP7Q8TDD2 431 aaPredicted RBP17.08■□□□□ 0.32
LMO3-203ENST00000332914 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
LMO3-203ENST00000332914 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
LMO3-203ENST00000332914 FKBP8Q14318 412 aa17.07■□□□□ 0.32
LMO3-203ENST00000332914 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
LMO3-203ENST00000332914 EVX2Q03828 476 aa17.06■□□□□ 0.32
LMO3-203ENST00000332914 SYCP2Q9BX26 1530 aa17.05■□□□□ 0.32
LMO3-203ENST00000332914 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
LMO3-203ENST00000332914 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
LMO3-203ENST00000332914 C3P01024 1663 aa17.02■□□□□ 0.32
LMO3-203ENST00000332914 MLH3Q9UHC1 1453 aa17.02■□□□□ 0.32
LMO3-203ENST00000332914 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
LMO3-203ENST00000332914 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
LMO3-203ENST00000332914 NCOA1Q15788 1441 aa17.01■□□□□ 0.31
LMO3-203ENST00000332914 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
LMO3-203ENST00000332914 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
LMO3-203ENST00000332914 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
LMO3-203ENST00000332914 REREQ9P2R6 1566 aa17■□□□□ 0.31
LMO3-203ENST00000332914 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
LMO3-203ENST00000332914 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
LMO3-203ENST00000332914 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
LMO3-203ENST00000332914 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
LMO3-203ENST00000332914 CEP162Q5TB80 1403 aa16.96■□□□□ 0.3
LMO3-203ENST00000332914 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
LMO3-203ENST00000332914 AGLP35573 1532 aa16.95■□□□□ 0.3
LMO3-203ENST00000332914 ATP7AQ04656 1500 aa16.94■□□□□ 0.3
LMO3-203ENST00000332914 EHBP1L1Q8N3D4 1523 aa16.93■□□□□ 0.3
LMO3-203ENST00000332914 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
LMO3-203ENST00000332914 INO80Q9ULG1 1556 aaPredicted RBP16.93■□□□□ 0.3
LMO3-203ENST00000332914 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
LMO3-203ENST00000332914 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
LMO3-203ENST00000332914 CLTCQ00610 1675 aaKnown RBP16.91■□□□□ 0.3
LMO3-203ENST00000332914 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
LMO3-203ENST00000332914 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
LMO3-203ENST00000332914 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
LMO3-203ENST00000332914 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
LMO3-203ENST00000332914 RGS17Q9UGC6 210 aaPredicted RBP16.87■□□□□ 0.29
LMO3-203ENST00000332914 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
LMO3-203ENST00000332914 PLXNC1O60486 1568 aa16.86■□□□□ 0.29
LMO3-203ENST00000332914 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
LMO3-203ENST00000332914 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
LMO3-203ENST00000332914 A2MP01023 1474 aa16.86■□□□□ 0.29
LMO3-203ENST00000332914 ADGBQ8N7X0 1667 aa16.85■□□□□ 0.29
LMO3-203ENST00000332914 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
LMO3-203ENST00000332914 TOM1O60784 492 aa16.83■□□□□ 0.28
LMO3-203ENST00000332914 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
LMO3-203ENST00000332914 GGT6Q6P531 493 aa16.83■□□□□ 0.28
LMO3-203ENST00000332914 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
LMO3-203ENST00000332914 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
LMO3-203ENST00000332914 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
LMO3-203ENST00000332914 MNX1P50219 401 aaPredicted RBP16.81■□□□□ 0.28
LMO3-203ENST00000332914 MYO3AQ8NEV4 1616 aa16.81■□□□□ 0.28
LMO3-203ENST00000332914 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
LMO3-203ENST00000332914 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
LMO3-203ENST00000332914 ZNF142P52746 1687 aaPredicted RBP16.75■□□□□ 0.27
LMO3-203ENST00000332914 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
LMO3-203ENST00000332914 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
LMO3-203ENST00000332914 SETD1AO15047 1707 aaKnown RBP16.74■□□□□ 0.27
LMO3-203ENST00000332914 PTPRKQ15262 1439 aa16.74■□□□□ 0.27
LMO3-203ENST00000332914 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
LMO3-203ENST00000332914 NPATQ14207 1427 aa16.73■□□□□ 0.27
LMO3-203ENST00000332914 PKD2Q13563 968 aa16.73■□□□□ 0.27
LMO3-203ENST00000332914 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
LMO3-203ENST00000332914 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
LMO3-203ENST00000332914 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
LMO3-203ENST00000332914 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
LMO3-203ENST00000332914 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
LMO3-203ENST00000332914 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
LMO3-203ENST00000332914 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
LMO3-203ENST00000332914 CPS1P31327 1500 aa16.7■□□□□ 0.26
LMO3-203ENST00000332914 ARHGEF5Q12774 1597 aa16.7■□□□□ 0.26
LMO3-203ENST00000332914 KIF3BO15066 747 aa16.7■□□□□ 0.26
LMO3-203ENST00000332914 MIER1Q8N108 512 aa16.7■□□□□ 0.26
LMO3-203ENST00000332914 GABBR2O75899 941 aa16.67■□□□□ 0.26
LMO3-203ENST00000332914 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
LMO3-203ENST00000332914 KDM5DQ9BY66 1539 aa16.66■□□□□ 0.26
LMO3-203ENST00000332914 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
LMO3-203ENST00000332914 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
LMO3-203ENST00000332914 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
LMO3-203ENST00000332914 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
LMO3-203ENST00000332914 CEP152O94986 1710 aa16.64■□□□□ 0.25
LMO3-203ENST00000332914 POLR1AO95602 1720 aaPredicted RBP16.63■□□□□ 0.25
LMO3-203ENST00000332914 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
LMO3-203ENST00000332914 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
LMO3-203ENST00000332914 TSPY4P0CV99 314 aa16.62■□□□□ 0.25
LMO3-203ENST00000332914 TSPY10P0CW01 314 aa16.62■□□□□ 0.25
LMO3-203ENST00000332914 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
LMO3-203ENST00000332914 TNRQ92752 1358 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms