RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 KIAA0556O60303 1618 aa19.15■□□□□ 0.66
SNX20-202ENST00000330943 DISP1Q96F81 1524 aa19.14■□□□□ 0.66
SNX20-202ENST00000330943 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
SNX20-202ENST00000330943 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
SNX20-202ENST00000330943 PDE3BQ13370 1112 aa19.13■□□□□ 0.65
SNX20-202ENST00000330943 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
SNX20-202ENST00000330943 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
SNX20-202ENST00000330943 ANKRD50Q9ULJ7 1429 aa19.13■□□□□ 0.65
SNX20-202ENST00000330943 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
SNX20-202ENST00000330943 E9PCH4 1651 aa19.13■□□□□ 0.65
SNX20-202ENST00000330943 PLIN1O60240 522 aa19.12■□□□□ 0.65
SNX20-202ENST00000330943 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
SNX20-202ENST00000330943 NUP155O75694 1391 aa19.12■□□□□ 0.65
SNX20-202ENST00000330943 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
SNX20-202ENST00000330943 SKAP1Q86WV1 359 aa19.12■□□□□ 0.65
SNX20-202ENST00000330943 CROCC2H7BZ55 1655 aa19.12■□□□□ 0.65
SNX20-202ENST00000330943 ARHGEF12Q9NZN5 1544 aa19.11■□□□□ 0.65
SNX20-202ENST00000330943 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
SNX20-202ENST00000330943 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
SNX20-202ENST00000330943 GPATCH8Q9UKJ3 1502 aaKnown RBP19.11■□□□□ 0.65
SNX20-202ENST00000330943 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.64
SNX20-202ENST00000330943 CRBNQ96SW2 442 aa19.07■□□□□ 0.64
SNX20-202ENST00000330943 DDRGK1Q96HY6 314 aa19.06■□□□□ 0.64
SNX20-202ENST00000330943 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
SNX20-202ENST00000330943 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
SNX20-202ENST00000330943 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
SNX20-202ENST00000330943 C9orf84Q5VXU9 1444 aa19■□□□□ 0.63
SNX20-202ENST00000330943 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
SNX20-202ENST00000330943 SLC4A3P48751 1232 aa19■□□□□ 0.63
SNX20-202ENST00000330943 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
SNX20-202ENST00000330943 ADCY10Q96PN6 1610 aa18.99■□□□□ 0.63
SNX20-202ENST00000330943 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
SNX20-202ENST00000330943 HNRNPMP52272 730 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNX20-202ENST00000330943 C20orf194Q5TEA3 1177 aa18.98■□□□□ 0.63
SNX20-202ENST00000330943 GSE1Q14687 1217 aa18.97■□□□□ 0.63
SNX20-202ENST00000330943 NFKBIBQ15653 356 aa18.97■□□□□ 0.63
SNX20-202ENST00000330943 BLMP54132 1417 aaPredicted RBP18.97■□□□□ 0.63
SNX20-202ENST00000330943 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
SNX20-202ENST00000330943 DAXXQ9UER7 740 aaPredicted RBP18.97■□□□□ 0.63
SNX20-202ENST00000330943 KDM5DQ9BY66 1539 aa18.97■□□□□ 0.63
SNX20-202ENST00000330943 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
SNX20-202ENST00000330943 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
SNX20-202ENST00000330943 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
SNX20-202ENST00000330943 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
SNX20-202ENST00000330943 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
SNX20-202ENST00000330943 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
SNX20-202ENST00000330943 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
SNX20-202ENST00000330943 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
SNX20-202ENST00000330943 PRAG1Q86YV5 1406 aa18.94■□□□□ 0.62
SNX20-202ENST00000330943 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
SNX20-202ENST00000330943 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
SNX20-202ENST00000330943 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
SNX20-202ENST00000330943 ZMYM4Q5VZL5 1548 aa18.92■□□□□ 0.62
SNX20-202ENST00000330943 PANK3Q9H999 370 aa18.92■□□□□ 0.62
SNX20-202ENST00000330943 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
SNX20-202ENST00000330943 COL17A1Q9UMD9 1497 aaPredicted RBP18.92■□□□□ 0.62
SNX20-202ENST00000330943 PTPRGP23470 1445 aa18.91■□□□□ 0.62
SNX20-202ENST00000330943 PLEKHH2Q8IVE3 1493 aa18.91■□□□□ 0.62
SNX20-202ENST00000330943 INSRP06213 1382 aa18.9■□□□□ 0.62
SNX20-202ENST00000330943 CENPQQ7L2Z9 268 aaPredicted RBP18.9■□□□□ 0.62
SNX20-202ENST00000330943 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
SNX20-202ENST00000330943 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.61
SNX20-202ENST00000330943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX20-202ENST00000330943 FAM161AQ3B820 660 aa18.88■□□□□ 0.61
SNX20-202ENST00000330943 ADAMTS8Q9UP79 889 aa18.87■□□□□ 0.61
SNX20-202ENST00000330943 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
SNX20-202ENST00000330943 TESK2Q96S53 571 aa18.87■□□□□ 0.61
SNX20-202ENST00000330943 C8orf34Q49A92 452 aa18.86■□□□□ 0.61
SNX20-202ENST00000330943 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
SNX20-202ENST00000330943 ERBINQ96RT1 1412 aa18.85■□□□□ 0.61
SNX20-202ENST00000330943 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
SNX20-202ENST00000330943 RGS3P49796 1198 aa18.84■□□□□ 0.61
SNX20-202ENST00000330943 PLEKHH1Q9ULM0 1364 aa18.84■□□□□ 0.61
SNX20-202ENST00000330943 NUP160Q12769 1436 aa18.83■□□□□ 0.61
SNX20-202ENST00000330943 ATP10BO94823 1461 aa18.83■□□□□ 0.61
SNX20-202ENST00000330943 DUSP27Q5VZP5 1158 aa18.83■□□□□ 0.61
SNX20-202ENST00000330943 A2MP01023 1474 aa18.83■□□□□ 0.6
SNX20-202ENST00000330943 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.6
SNX20-202ENST00000330943 TMF1P82094 1093 aa18.83■□□□□ 0.6
SNX20-202ENST00000330943 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNX20-202ENST00000330943 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
SNX20-202ENST00000330943 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.8■□□□□ 0.6
SNX20-202ENST00000330943 GOLGA2Q08379 1002 aa18.79■□□□□ 0.6
SNX20-202ENST00000330943 LAMC1P11047 1609 aa18.79■□□□□ 0.6
SNX20-202ENST00000330943 ARHGEF5Q12774 1597 aa18.78■□□□□ 0.6
SNX20-202ENST00000330943 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
SNX20-202ENST00000330943 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
SNX20-202ENST00000330943 PPP2R1AP30153 589 aa18.77■□□□□ 0.59
SNX20-202ENST00000330943 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
SNX20-202ENST00000330943 ABCA8O94911 1581 aa18.76■□□□□ 0.59
SNX20-202ENST00000330943 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
SNX20-202ENST00000330943 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
SNX20-202ENST00000330943 ZNF521Q96K83 1311 aa18.75■□□□□ 0.59
SNX20-202ENST00000330943 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
SNX20-202ENST00000330943 MAGI2Q86UL8 1455 aa18.73■□□□□ 0.59
SNX20-202ENST00000330943 SLFN5Q08AF3 891 aa18.72■□□□□ 0.59
SNX20-202ENST00000330943 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
SNX20-202ENST00000330943 SAMD9LQ8IVG5 1584 aa18.71■□□□□ 0.59
SNX20-202ENST00000330943 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
SNX20-202ENST00000330943 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms