RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NAIPQ13075 1403 aa7.65□□□□□ -1.18
LRIT3-201ENST00000327908 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
LRIT3-201ENST00000327908 ARHGAP31Q2M1Z3 1444 aa7.65□□□□□ -1.19
LRIT3-201ENST00000327908 IQGAP3Q86VI3 1631 aa7.65□□□□□ -1.19
LRIT3-201ENST00000327908 RAPGEF3O95398 923 aa7.65□□□□□ -1.19
LRIT3-201ENST00000327908 COL17A1Q9UMD9 1497 aaPredicted RBP7.64□□□□□ -1.19
LRIT3-201ENST00000327908 TET3O43151 1660 aa7.64□□□□□ -1.19
LRIT3-201ENST00000327908 VWDEQ8N2E2 1590 aa7.63□□□□□ -1.19
LRIT3-201ENST00000327908 NPATQ14207 1427 aa7.63□□□□□ -1.19
LRIT3-201ENST00000327908 YEATS2Q9ULM3 1422 aa7.63□□□□□ -1.19
LRIT3-201ENST00000327908 ARID4BQ4LE39 1312 aaPredicted RBP7.61□□□□□ -1.19
LRIT3-201ENST00000327908 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
LRIT3-201ENST00000327908 RRP7BPQ9NSQ0 103 aa7.61□□□□□ -1.19
LRIT3-201ENST00000327908 ADAMTSL3P82987 1691 aa7.61□□□□□ -1.19
LRIT3-201ENST00000327908 KIF3BO15066 747 aa7.61□□□□□ -1.19
LRIT3-201ENST00000327908 ABCC3O15438 1527 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 NEURL4Q96JN8 1562 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 FER1L4A9Z1Z3 1794 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 PTPRKQ15262 1439 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 PZPP20742 1482 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 EFCAB6Q5THR3 1501 aa7.6□□□□□ -1.19
LRIT3-201ENST00000327908 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
LRIT3-201ENST00000327908 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
LRIT3-201ENST00000327908 CAMSAP1Q5T5Y3 1602 aa7.59□□□□□ -1.19
LRIT3-201ENST00000327908 KDM5AP29375 1690 aaKnown RBP7.59□□□□□ -1.19
LRIT3-201ENST00000327908 ITGAEP38570 1179 aa7.59□□□□□ -1.2
LRIT3-201ENST00000327908 NUP155O75694 1391 aa7.59□□□□□ -1.2
LRIT3-201ENST00000327908 RAB3GAP2Q9H2M9 1393 aa7.59□□□□□ -1.2
LRIT3-201ENST00000327908 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
LRIT3-201ENST00000327908 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
LRIT3-201ENST00000327908 MROH1Q8NDA8 1641 aa7.58□□□□□ -1.2
LRIT3-201ENST00000327908 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
LRIT3-201ENST00000327908 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
LRIT3-201ENST00000327908 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
LRIT3-201ENST00000327908 TIMELESSQ9UNS1 1208 aa7.57□□□□□ -1.2
LRIT3-201ENST00000327908 SPATA31D1Q6ZQQ2 1576 aa7.56□□□□□ -1.2
LRIT3-201ENST00000327908 TRPM2O94759 1503 aa7.55□□□□□ -1.2
LRIT3-201ENST00000327908 CLTCQ00610 1675 aaKnown RBP7.55□□□□□ -1.2
LRIT3-201ENST00000327908 SLC4A1APQ9BWU0 796 aaKnown RBP7.55□□□□□ -1.2
LRIT3-201ENST00000327908 PTPRTO14522 1441 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 ERVK-7P63135 1459 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 MADDQ8WXG6 1647 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 GGT6Q6P531 493 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 RPGRIP1LQ68CZ1 1315 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 CEP152O94986 1710 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 RIMS1Q86UR5 1692 aaKnown RBP7.54□□□□□ -1.2
LRIT3-201ENST00000327908 TNRQ92752 1358 aa7.54□□□□□ -1.2
LRIT3-201ENST00000327908 SPHKAPQ2M3C7 1700 aa7.53□□□□□ -1.2
LRIT3-201ENST00000327908 NOS1P29475 1434 aa7.53□□□□□ -1.2
LRIT3-201ENST00000327908 ZMYM3Q14202 1370 aa7.53□□□□□ -1.2
LRIT3-201ENST00000327908 ZNF142P52746 1687 aaPredicted RBP7.53□□□□□ -1.2
LRIT3-201ENST00000327908 PREX1Q8TCU6 1659 aa7.53□□□□□ -1.2
LRIT3-201ENST00000327908 SETD1BQ9UPS6 1966 aaKnown RBP7.52□□□□□ -1.2
LRIT3-201ENST00000327908 ZEB1P37275 1124 aaPredicted RBP7.52□□□□□ -1.21
LRIT3-201ENST00000327908 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.52□□□□□ -1.21
LRIT3-201ENST00000327908 MPHOSPH9Q99550 1183 aa7.52□□□□□ -1.21
LRIT3-201ENST00000327908 A2ML1A8K2U0 1454 aa7.52□□□□□ -1.21
LRIT3-201ENST00000327908 UHRF1BP1Q6BDS2 1440 aa7.52□□□□□ -1.21
LRIT3-201ENST00000327908 PTPRMP28827 1452 aa7.52□□□□□ -1.21
LRIT3-201ENST00000327908 CCDC144AA2RUR9 1427 aa7.51□□□□□ -1.21
LRIT3-201ENST00000327908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.51□□□□□ -1.21
LRIT3-201ENST00000327908 C3P01024 1663 aa7.51□□□□□ -1.21
LRIT3-201ENST00000327908 ADGRB3O60242 1522 aa7.51□□□□□ -1.21
LRIT3-201ENST00000327908 E9PCH4 1651 aa7.5□□□□□ -1.21
LRIT3-201ENST00000327908 PLA2R1Q13018 1463 aa7.5□□□□□ -1.21
LRIT3-201ENST00000327908 PKD2Q13563 968 aa7.49□□□□□ -1.21
LRIT3-201ENST00000327908 ANKRD30BQ9BXX2 1392 aa7.49□□□□□ -1.21
LRIT3-201ENST00000327908 PIK3C2BO00750 1634 aa7.49□□□□□ -1.21
LRIT3-201ENST00000327908 KIF1BO60333 1816 aa7.49□□□□□ -1.21
LRIT3-201ENST00000327908 THEMISQ8N1K5 641 aaPredicted RBP7.48□□□□□ -1.21
LRIT3-201ENST00000327908 PCGF6Q9BYE7 350 aa7.48□□□□□ -1.21
LRIT3-201ENST00000327908 MYO3AQ8NEV4 1616 aa7.48□□□□□ -1.21
LRIT3-201ENST00000327908 MLECQ14165 292 aa7.48□□□□□ -1.21
LRIT3-201ENST00000327908 ZFYVE9O95405 1425 aa7.48□□□□□ -1.21
LRIT3-201ENST00000327908 DHX57Q6P158 1386 aaKnown RBP7.47□□□□□ -1.21
LRIT3-201ENST00000327908 DIP2AQ14689 1571 aa7.47□□□□□ -1.21
LRIT3-201ENST00000327908 CEP170BQ9Y4F5 1589 aaPredicted RBP7.47□□□□□ -1.21
LRIT3-201ENST00000327908 STAG3Q9UJ98 1225 aa7.47□□□□□ -1.21
LRIT3-201ENST00000327908 DMRT2Q9Y5R5 561 aa7.47□□□□□ -1.21
LRIT3-201ENST00000327908 SIGLEC1Q9BZZ2 1709 aa7.47□□□□□ -1.21
LRIT3-201ENST00000327908 EID1Q9Y6B2 187 aa7.46□□□□□ -1.21
LRIT3-201ENST00000327908 SLC24A1O60721 1099 aa7.46□□□□□ -1.22
LRIT3-201ENST00000327908 LAMC1P11047 1609 aa7.46□□□□□ -1.22
LRIT3-201ENST00000327908 MYOM2P54296 1465 aa7.46□□□□□ -1.22
LRIT3-201ENST00000327908 SLIT1O75093 1534 aa7.45□□□□□ -1.22
LRIT3-201ENST00000327908 UGGT1Q9NYU2 1555 aa7.45□□□□□ -1.22
LRIT3-201ENST00000327908 SYNMO15061 1565 aa7.45□□□□□ -1.22
LRIT3-201ENST00000327908 VGFO15240 615 aaPredicted RBP7.44□□□□□ -1.22
LRIT3-201ENST00000327908 TONSLQ96HA7 1378 aa7.44□□□□□ -1.22
LRIT3-201ENST00000327908 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
LRIT3-201ENST00000327908 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
LRIT3-201ENST00000327908 PIK3R4Q99570 1358 aa7.44□□□□□ -1.22
LRIT3-201ENST00000327908 CLTCL1P53675 1640 aa7.43□□□□□ -1.22
LRIT3-201ENST00000327908 TMEM131LA2VDJ0 1609 aa7.43□□□□□ -1.22
LRIT3-201ENST00000327908 UBR1Q8IWV7 1749 aa7.42□□□□□ -1.22
LRIT3-201ENST00000327908 KIAA1210Q9ULL0 1709 aa7.42□□□□□ -1.22
LRIT3-201ENST00000327908 AEBP2Q6ZN18 517 aaPredicted RBP7.42□□□□□ -1.22
LRIT3-201ENST00000327908 ANKLE2Q86XL3 938 aa7.42□□□□□ -1.22
LRIT3-201ENST00000327908 TMEM2Q9UHN6 1383 aa7.41□□□□□ -1.22
LRIT3-201ENST00000327908 SPATA31E1Q6ZUB1 1445 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms