RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
RPAIN-201ENST00000327154 PKD2Q13563 968 aa22.11■■□□□ 1.13
RPAIN-201ENST00000327154 KDM5DQ9BY66 1539 aa22.09■■□□□ 1.13
RPAIN-201ENST00000327154 TNRQ92752 1358 aa22.09■■□□□ 1.13
RPAIN-201ENST00000327154 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
RPAIN-201ENST00000327154 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.13
RPAIN-201ENST00000327154 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
RPAIN-201ENST00000327154 A2ML1A8K2U0 1454 aa22.06■■□□□ 1.12
RPAIN-201ENST00000327154 PZPP20742 1482 aa22.06■■□□□ 1.12
RPAIN-201ENST00000327154 PLA2R1Q13018 1463 aa22.05■■□□□ 1.12
RPAIN-201ENST00000327154 FAM135AQ9P2D6 1515 aa22.05■■□□□ 1.12
RPAIN-201ENST00000327154 RRP7BPQ9NSQ0 103 aa22.04■■□□□ 1.12
RPAIN-201ENST00000327154 ABCC5O15440 1437 aa22.04■■□□□ 1.12
RPAIN-201ENST00000327154 ZNF142P52746 1687 aaPredicted RBP22.04■■□□□ 1.12
RPAIN-201ENST00000327154 ZNF335Q9H4Z2 1342 aaPredicted RBP22.03■■□□□ 1.12
RPAIN-201ENST00000327154 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
RPAIN-201ENST00000327154 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
RPAIN-201ENST00000327154 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
RPAIN-201ENST00000327154 DNMT1P26358 1616 aaKnown RBP21.99■■□□□ 1.11
RPAIN-201ENST00000327154 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
RPAIN-201ENST00000327154 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
RPAIN-201ENST00000327154 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
RPAIN-201ENST00000327154 DUOX2Q9NRD8 1548 aa21.98■■□□□ 1.11
RPAIN-201ENST00000327154 CHIC2Q9UKJ5 165 aa21.98■■□□□ 1.11
RPAIN-201ENST00000327154 ABCC3O15438 1527 aa21.97■■□□□ 1.11
RPAIN-201ENST00000327154 RNF17Q9BXT8 1623 aaKnown RBP21.97■■□□□ 1.11
RPAIN-201ENST00000327154 DAPK1P53355 1430 aa21.97■■□□□ 1.11
RPAIN-201ENST00000327154 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
RPAIN-201ENST00000327154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.96■■□□□ 1.11
RPAIN-201ENST00000327154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.12e-6■□□□□ 10.3
RPAIN-201ENST00000327154 NLRP1Q9C000 1473 aa21.94■■□□□ 1.1
RPAIN-201ENST00000327154 SHANK2Q9UPX8 1470 aa21.94■■□□□ 1.1
RPAIN-201ENST00000327154 EIF2AK4Q9P2K8 1649 aaKnown RBP21.94■■□□□ 1.1
RPAIN-201ENST00000327154 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
RPAIN-201ENST00000327154 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
RPAIN-201ENST00000327154 UGGT1Q9NYU2 1555 aa21.91■■□□□ 1.1
RPAIN-201ENST00000327154 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
RPAIN-201ENST00000327154 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
RPAIN-201ENST00000327154 ANKRD30AQ9BXX3 1397 aa21.9■■□□□ 1.1
RPAIN-201ENST00000327154 ERVK-7P63135 1459 aa21.89■■□□□ 1.09
RPAIN-201ENST00000327154 ZC3H13Q5T200 1668 aaKnown RBP21.88■■□□□ 1.09
RPAIN-201ENST00000327154 SPATA31D1Q6ZQQ2 1576 aa21.87■■□□□ 1.09
RPAIN-201ENST00000327154 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
RPAIN-201ENST00000327154 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
RPAIN-201ENST00000327154 NEURL4Q96JN8 1562 aa21.85■■□□□ 1.09
RPAIN-201ENST00000327154 KANK1Q14678 1352 aa21.85■■□□□ 1.09
RPAIN-201ENST00000327154 NPHP4O75161 1426 aaPredicted RBP21.83■■□□□ 1.09
RPAIN-201ENST00000327154 ARHGAP31Q2M1Z3 1444 aa21.83■■□□□ 1.09
RPAIN-201ENST00000327154 CEP152O94986 1710 aa21.83■■□□□ 1.08
RPAIN-201ENST00000327154 PRDM15P57071 1507 aaPredicted RBP21.82■■□□□ 1.08
RPAIN-201ENST00000327154 MED14O60244 1454 aa21.8■■□□□ 1.08
RPAIN-201ENST00000327154 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
RPAIN-201ENST00000327154 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
RPAIN-201ENST00000327154 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
RPAIN-201ENST00000327154 ADGRL2O95490 1459 aa21.77■■□□□ 1.07
RPAIN-201ENST00000327154 DEPDC5O75140 1603 aa21.77■■□□□ 1.07
RPAIN-201ENST00000327154 LTKP29376 864 aa21.76■■□□□ 1.07
RPAIN-201ENST00000327154 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
RPAIN-201ENST00000327154 IDI1Q13907 227 aa21.75■■□□□ 1.07
RPAIN-201ENST00000327154 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
RPAIN-201ENST00000327154 CPS1P31327 1500 aa21.75■■□□□ 1.07
RPAIN-201ENST00000327154 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
RPAIN-201ENST00000327154 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
RPAIN-201ENST00000327154 VWDEQ8N2E2 1590 aa21.73■■□□□ 1.07
RPAIN-201ENST00000327154 DISP3Q9P2K9 1392 aa21.73■■□□□ 1.07
RPAIN-201ENST00000327154 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
RPAIN-201ENST00000327154 TOM1O60784 492 aa21.72■■□□□ 1.07
RPAIN-201ENST00000327154 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
RPAIN-201ENST00000327154 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
RPAIN-201ENST00000327154 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
RPAIN-201ENST00000327154 UBR1Q8IWV7 1749 aa21.71■■□□□ 1.07
RPAIN-201ENST00000327154 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
RPAIN-201ENST00000327154 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
RPAIN-201ENST00000327154 ITGAEP38570 1179 aa21.68■■□□□ 1.06
RPAIN-201ENST00000327154 TMEM2Q9UHN6 1383 aa21.68■■□□□ 1.06
RPAIN-201ENST00000327154 SLIT1O75093 1534 aa21.68■■□□□ 1.06
RPAIN-201ENST00000327154 NOS1P29475 1434 aa21.65■■□□□ 1.06
RPAIN-201ENST00000327154 SLC52A1Q9NWF4 448 aa21.65■■□□□ 1.06
RPAIN-201ENST00000327154 PIK3C2BO00750 1634 aa21.65■■□□□ 1.06
RPAIN-201ENST00000327154 EFCAB6Q5THR3 1501 aa21.64■■□□□ 1.05
RPAIN-201ENST00000327154 HSPA1LP34931 641 aa21.63■■□□□ 1.05
RPAIN-201ENST00000327154 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
RPAIN-201ENST00000327154 SYNMO15061 1565 aa21.61■■□□□ 1.05
RPAIN-201ENST00000327154 LRRC7Q96NW7 1537 aa21.61■■□□□ 1.05
RPAIN-201ENST00000327154 ILDR2Q71H61 639 aa21.61■■□□□ 1.05
RPAIN-201ENST00000327154 RPRD2Q5VT52 1461 aaKnown RBP21.58■■□□□ 1.05
RPAIN-201ENST00000327154 SLC26A8Q96RN1 970 aa21.58■■□□□ 1.05
RPAIN-201ENST00000327154 STRCP1A6NGW2 1772 aa21.58■■□□□ 1.04
RPAIN-201ENST00000327154 BCANQ96GW7 911 aa21.56■■□□□ 1.04
RPAIN-201ENST00000327154 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
RPAIN-201ENST00000327154 NUP155O75694 1391 aa21.55■■□□□ 1.04
RPAIN-201ENST00000327154 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
RPAIN-201ENST00000327154 CHGAP10645 457 aaKnown RBP21.53■■□□□ 1.04
RPAIN-201ENST00000327154 KCNA6P17658 529 aa21.53■■□□□ 1.04
RPAIN-201ENST00000327154 ADGRB3O60242 1522 aa21.53■■□□□ 1.04
RPAIN-201ENST00000327154 TET3O43151 1660 aa21.53■■□□□ 1.04
RPAIN-201ENST00000327154 ALKQ9UM73 1620 aa21.52■■□□□ 1.04
RPAIN-201ENST00000327154 HDGFP51858 240 aaKnown RBP21.52■■□□□ 1.04
RPAIN-201ENST00000327154 UNC13BO14795 1591 aa21.52■■□□□ 1.04
RPAIN-201ENST00000327154 PPP1R15AO75807 674 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms