RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
CHRNA3-201ENST00000326828 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
CHRNA3-201ENST00000326828 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
CHRNA3-201ENST00000326828 KDM5CP41229 1560 aa18.68■□□□□ 0.58
CHRNA3-201ENST00000326828 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
CHRNA3-201ENST00000326828 TSPY4P0CV99 314 aa18.68■□□□□ 0.58
CHRNA3-201ENST00000326828 TSPY10P0CW01 314 aa18.68■□□□□ 0.58
CHRNA3-201ENST00000326828 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHRNA3-201ENST00000326828 ANKRD30AQ9BXX3 1397 aa18.67■□□□□ 0.58
CHRNA3-201ENST00000326828 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
CHRNA3-201ENST00000326828 MBD5Q9P267 1494 aa18.66■□□□□ 0.58
CHRNA3-201ENST00000326828 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
CHRNA3-201ENST00000326828 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
CHRNA3-201ENST00000326828 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-201ENST00000326828 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
CHRNA3-201ENST00000326828 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHRNA3-201ENST00000326828 WDR62O43379 1518 aa18.65■□□□□ 0.58
CHRNA3-201ENST00000326828 FAM161AQ3B820 660 aa18.64■□□□□ 0.58
CHRNA3-201ENST00000326828 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.58
CHRNA3-201ENST00000326828 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-201ENST00000326828 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
CHRNA3-201ENST00000326828 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
CHRNA3-201ENST00000326828 KIF14Q15058 1648 aa18.61■□□□□ 0.57
CHRNA3-201ENST00000326828 CENPQQ7L2Z9 268 aaPredicted RBP18.61■□□□□ 0.57
CHRNA3-201ENST00000326828 PARD3Q8TEW0 1356 aa18.6■□□□□ 0.57
CHRNA3-201ENST00000326828 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
CHRNA3-201ENST00000326828 DISP3Q9P2K9 1392 aa18.59■□□□□ 0.57
CHRNA3-201ENST00000326828 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
CHRNA3-201ENST00000326828 SPRYD3Q8NCJ5 442 aa18.59■□□□□ 0.57
CHRNA3-201ENST00000326828 BCAR3O75815 825 aa18.57■□□□□ 0.56
CHRNA3-201ENST00000326828 POGKQ9P215 609 aa18.57■□□□□ 0.56
CHRNA3-201ENST00000326828 KDM2BQ8NHM5 1336 aa18.57■□□□□ 0.56
CHRNA3-201ENST00000326828 PLEKHD1A6NEE1 506 aa18.56■□□□□ 0.56
CHRNA3-201ENST00000326828 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 KNSTRNQ9Y448 316 aa18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
CHRNA3-201ENST00000326828 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
CHRNA3-201ENST00000326828 TMF1P82094 1093 aa18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 SEC24BO95487 1268 aa18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 TROQ12816 1431 aaPredicted RBP18.53■□□□□ 0.56
CHRNA3-201ENST00000326828 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
CHRNA3-201ENST00000326828 APAF1O14727 1248 aa18.51■□□□□ 0.55
CHRNA3-201ENST00000326828 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 TESK2Q96S53 571 aa18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 GZF1Q9H116 711 aaPredicted RBP18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 IGHDP01880 384 aa18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
CHRNA3-201ENST00000326828 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
CHRNA3-201ENST00000326828 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
CHRNA3-201ENST00000326828 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
CHRNA3-201ENST00000326828 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
CHRNA3-201ENST00000326828 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
CHRNA3-201ENST00000326828 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
CHRNA3-201ENST00000326828 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
CHRNA3-201ENST00000326828 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
CHRNA3-201ENST00000326828 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
CHRNA3-201ENST00000326828 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
CHRNA3-201ENST00000326828 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
CHRNA3-201ENST00000326828 ERBINQ96RT1 1412 aa18.43■□□□□ 0.54
CHRNA3-201ENST00000326828 RAPGEF6Q8TEU7 1601 aa18.42■□□□□ 0.54
CHRNA3-201ENST00000326828 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
CHRNA3-201ENST00000326828 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
CHRNA3-201ENST00000326828 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
CHRNA3-201ENST00000326828 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
CHRNA3-201ENST00000326828 UBE2Q2Q8WVN8 375 aa18.4■□□□□ 0.54
CHRNA3-201ENST00000326828 KIAA0556O60303 1618 aa18.39■□□□□ 0.54
CHRNA3-201ENST00000326828 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
CHRNA3-201ENST00000326828 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
CHRNA3-201ENST00000326828 BECN1Q14457 450 aa18.39■□□□□ 0.53
CHRNA3-201ENST00000326828 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 RRAGDQ9NQL2 400 aaPredicted RBP18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
CHRNA3-201ENST00000326828 TNNQ9UQP3 1299 aa18.37■□□□□ 0.53
CHRNA3-201ENST00000326828 USP19O94966 1318 aa18.36■□□□□ 0.53
CHRNA3-201ENST00000326828 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
CHRNA3-201ENST00000326828 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
CHRNA3-201ENST00000326828 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
CHRNA3-201ENST00000326828 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
CHRNA3-201ENST00000326828 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
CHRNA3-201ENST00000326828 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
CHRNA3-201ENST00000326828 E9PCH4 1651 aa18.33■□□□□ 0.53
CHRNA3-201ENST00000326828 PANK2Q9BZ23 570 aa18.33■□□□□ 0.52
CHRNA3-201ENST00000326828 A2MP01023 1474 aa18.32■□□□□ 0.52
CHRNA3-201ENST00000326828 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
CHRNA3-201ENST00000326828 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
CHRNA3-201ENST00000326828 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
CHRNA3-201ENST00000326828 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
CHRNA3-201ENST00000326828 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
CHRNA3-201ENST00000326828 ITSN2Q9NZM3 1697 aa18.29■□□□□ 0.52
CHRNA3-201ENST00000326828 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms