RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 APLP2Q06481 763 aa27.86■■■□□ 2.05
PTPMT1-201ENST00000326656 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
PTPMT1-201ENST00000326656 MAST1Q9Y2H9 1570 aa27.86■■■□□ 2.05
PTPMT1-201ENST00000326656 PKD2Q13563 968 aa27.85■■■□□ 2.05
PTPMT1-201ENST00000326656 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
PTPMT1-201ENST00000326656 CEP170BQ9Y4F5 1589 aaPredicted RBP27.85■■■□□ 2.05
PTPMT1-201ENST00000326656 KDM5DQ9BY66 1539 aa27.84■■■□□ 2.05
PTPMT1-201ENST00000326656 PZPP20742 1482 aa27.81■■■□□ 2.04
PTPMT1-201ENST00000326656 A2ML1A8K2U0 1454 aa27.8■■■□□ 2.04
PTPMT1-201ENST00000326656 NCKAP5LQ9HCH0 1330 aa27.79■■■□□ 2.04
PTPMT1-201ENST00000326656 TCOF1Q13428 1488 aaKnown RBP27.78■■■□□ 2.04
PTPMT1-201ENST00000326656 ILDR2Q71H61 639 aa27.78■■■□□ 2.04
PTPMT1-201ENST00000326656 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
PTPMT1-201ENST00000326656 TNRQ92752 1358 aa27.77■■■□□ 2.04
PTPMT1-201ENST00000326656 DISP3Q9P2K9 1392 aa27.77■■■□□ 2.04
PTPMT1-201ENST00000326656 IQSEC2Q5JU85 1478 aa27.76■■■□□ 2.04
PTPMT1-201ENST00000326656 FBXO31Q5XUX0 539 aaPredicted RBP27.76■■■□□ 2.03
PTPMT1-201ENST00000326656 RNF17Q9BXT8 1623 aaKnown RBP27.74■■■□□ 2.03
PTPMT1-201ENST00000326656 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
PTPMT1-201ENST00000326656 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
PTPMT1-201ENST00000326656 ZC3H13Q5T200 1668 aaKnown RBP27.69■■■□□ 2.02
PTPMT1-201ENST00000326656 DUOX2Q9NRD8 1548 aa27.69■■■□□ 2.02
PTPMT1-201ENST00000326656 NLRP1Q9C000 1473 aa27.69■■■□□ 2.02
PTPMT1-201ENST00000326656 THEMISQ8N1K5 641 aaPredicted RBP27.68■■■□□ 2.02
PTPMT1-201ENST00000326656 SHANK2Q9UPX8 1470 aa27.68■■■□□ 2.02
PTPMT1-201ENST00000326656 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
PTPMT1-201ENST00000326656 ABCC3O15438 1527 aa27.66■■■□□ 2.02
PTPMT1-201ENST00000326656 ABCC5O15440 1437 aa27.65■■■□□ 2.02
PTPMT1-201ENST00000326656 FGD6Q6ZV73 1430 aa27.63■■■□□ 2.01
PTPMT1-201ENST00000326656 ZNF335Q9H4Z2 1342 aaPredicted RBP27.63■■■□□ 2.01
PTPMT1-201ENST00000326656 CROCC2H7BZ55 1655 aa27.62■■■□□ 2.01
PTPMT1-201ENST00000326656 KIF15Q9NS87 1388 aa27.61■■■□□ 2.01
PTPMT1-201ENST00000326656 ANKLE2Q86XL3 938 aa27.61■■■□□ 2.01
PTPMT1-201ENST00000326656 MROH1Q8NDA8 1641 aa27.6■■■□□ 2.01
PTPMT1-201ENST00000326656 ERBINQ96RT1 1412 aa27.6■■■□□ 2.01
PTPMT1-201ENST00000326656 POLR1AO95602 1720 aaPredicted RBP27.59■■■□□ 2.01
PTPMT1-201ENST00000326656 SPATA31D1Q6ZQQ2 1576 aa27.59■■■□□ 2.01
PTPMT1-201ENST00000326656 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
PTPMT1-201ENST00000326656 DAPK1P53355 1430 aa27.58■■■□□ 2.01
PTPMT1-201ENST00000326656 SOCS7O14512 581 aa27.57■■■□□ 2
PTPMT1-201ENST00000326656 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
PTPMT1-201ENST00000326656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.56■■■□□ 2
PTPMT1-201ENST00000326656 ERVK-7P63135 1459 aa27.54■■■□□ 2
PTPMT1-201ENST00000326656 ARHGAP31Q2M1Z3 1444 aa27.54■■■□□ 2
PTPMT1-201ENST00000326656 NEURL4Q96JN8 1562 aa27.54■■■□□ 2
PTPMT1-201ENST00000326656 ANKRD30AQ9BXX3 1397 aa27.54■■■□□ 2
PTPMT1-201ENST00000326656 DEPDC5O75140 1603 aa27.53■■■□□ 2
PTPMT1-201ENST00000326656 PRDM15P57071 1507 aaPredicted RBP27.53■■■□□ 2
PTPMT1-201ENST00000326656 MED14O60244 1454 aa27.52■■■□□ 2
PTPMT1-201ENST00000326656 CEP152O94986 1710 aa27.51■■□□□ 1.99
PTPMT1-201ENST00000326656 KANK1Q14678 1352 aa27.48■■□□□ 1.99
PTPMT1-201ENST00000326656 CPS1P31327 1500 aa27.47■■□□□ 1.99
PTPMT1-201ENST00000326656 CFAP65Q6ZU64 1925 aaKnown RBP27.47■■□□□ 1.99
PTPMT1-201ENST00000326656 UBAP1LF5GYI3 381 aa27.46■■□□□ 1.99
PTPMT1-201ENST00000326656 NPHP4O75161 1426 aaPredicted RBP27.46■■□□□ 1.99
PTPMT1-201ENST00000326656 CHIC2Q9UKJ5 165 aa27.44■■□□□ 1.98
PTPMT1-201ENST00000326656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.98
PTPMT1-201ENST00000326656 ADGRL2O95490 1459 aa27.42■■□□□ 1.98
PTPMT1-201ENST00000326656 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
PTPMT1-201ENST00000326656 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
PTPMT1-201ENST00000326656 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
PTPMT1-201ENST00000326656 VWDEQ8N2E2 1590 aa27.39■■□□□ 1.98
PTPMT1-201ENST00000326656 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
PTPMT1-201ENST00000326656 TOM1O60784 492 aa27.35■■□□□ 1.97
PTPMT1-201ENST00000326656 SLIT1O75093 1534 aa27.35■■□□□ 1.97
PTPMT1-201ENST00000326656 ARHGAP23Q9P227 1491 aa27.34■■□□□ 1.97
PTPMT1-201ENST00000326656 SCAF11Q99590 1463 aaKnown RBP27.33■■□□□ 1.97
PTPMT1-201ENST00000326656 TXNDC2Q86VQ3 553 aa27.32■■□□□ 1.96
PTPMT1-201ENST00000326656 EID1Q9Y6B2 187 aa27.32■■□□□ 1.96
PTPMT1-201ENST00000326656 KDM5AP29375 1690 aaKnown RBP27.32■■□□□ 1.96
PTPMT1-201ENST00000326656 ANKRD50Q9ULJ7 1429 aa27.31■■□□□ 1.96
PTPMT1-201ENST00000326656 LTKP29376 864 aa27.28■■□□□ 1.96
PTPMT1-201ENST00000326656 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
PTPMT1-201ENST00000326656 PIK3C2BO00750 1634 aa27.27■■□□□ 1.96
PTPMT1-201ENST00000326656 EFCAB6Q5THR3 1501 aa27.27■■□□□ 1.96
PTPMT1-201ENST00000326656 TMEM2Q9UHN6 1383 aa27.27■■□□□ 1.96
PTPMT1-201ENST00000326656 IDI1Q13907 227 aa27.27■■□□□ 1.96
PTPMT1-201ENST00000326656 SLC52A1Q9NWF4 448 aa27.27■■□□□ 1.96
PTPMT1-201ENST00000326656 NOS1P29475 1434 aa27.26■■□□□ 1.95
PTPMT1-201ENST00000326656 RPRD2Q5VT52 1461 aaKnown RBP27.25■■□□□ 1.95
PTPMT1-201ENST00000326656 ROCK1Q13464 1354 aa27.22■■□□□ 1.95
PTPMT1-201ENST00000326656 SYNMO15061 1565 aa27.22■■□□□ 1.95
PTPMT1-201ENST00000326656 STRCP1A6NGW2 1772 aa27.21■■□□□ 1.95
PTPMT1-201ENST00000326656 LRRC7Q96NW7 1537 aa27.21■■□□□ 1.95
PTPMT1-201ENST00000326656 PIP4K2BP78356 416 aa27.19■■□□□ 1.94
PTPMT1-201ENST00000326656 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
PTPMT1-201ENST00000326656 TET3O43151 1660 aa27.17■■□□□ 1.94
PTPMT1-201ENST00000326656 HSPA1LP34931 641 aa27.14■■□□□ 1.94
PTPMT1-201ENST00000326656 UNC13BO14795 1591 aa27.14■■□□□ 1.93
PTPMT1-201ENST00000326656 ADGRB3O60242 1522 aa27.13■■□□□ 1.93
PTPMT1-201ENST00000326656 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
PTPMT1-201ENST00000326656 HDGFP51858 240 aaKnown RBP27.11■■□□□ 1.93
PTPMT1-201ENST00000326656 ALKQ9UM73 1620 aa27.11■■□□□ 1.93
PTPMT1-201ENST00000326656 KCNA6P17658 529 aa27.07■■□□□ 1.92
PTPMT1-201ENST00000326656 IQGAP3Q86VI3 1631 aa27.05■■□□□ 1.92
PTPMT1-201ENST00000326656 SLC26A8Q96RN1 970 aa27.03■■□□□ 1.92
PTPMT1-201ENST00000326656 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
PTPMT1-201ENST00000326656 TMEM131LA2VDJ0 1609 aa27.01■■□□□ 1.92
PTPMT1-201ENST00000326656 ZFYVE9O95405 1425 aa27.01■■□□□ 1.91
PTPMT1-201ENST00000326656 NUP155O75694 1391 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms