RNA–Protein interactions for RNA: ENST00000326539.6

PRNT-201, Transcript of prion locus lncRNA, testis expressed, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNT, Length 2,333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNT-201ENST00000326539 FANCAO15360 1455 aa12.47□□□□□ -0.41
PRNT-201ENST00000326539 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
PRNT-201ENST00000326539 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
PRNT-201ENST00000326539 USP35Q9P2H5 1018 aa12.47□□□□□ -0.41
PRNT-201ENST00000326539 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
PRNT-201ENST00000326539 ARID3CA6NKF2 412 aa12.46□□□□□ -0.41
PRNT-201ENST00000326539 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
PRNT-201ENST00000326539 MED1Q15648 1581 aaPredicted RBP12.46□□□□□ -0.41
PRNT-201ENST00000326539 ABCA9Q8IUA7 1624 aa12.44□□□□□ -0.42
PRNT-201ENST00000326539 ABCA8O94911 1581 aa12.43□□□□□ -0.42
PRNT-201ENST00000326539 AKNAQ7Z591 1439 aa12.42□□□□□ -0.42
PRNT-201ENST00000326539 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
PRNT-201ENST00000326539 FER1L4A9Z1Z3 1794 aa12.42□□□□□ -0.42
PRNT-201ENST00000326539 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
PRNT-201ENST00000326539 TEX2Q8IWB9 1127 aa12.4□□□□□ -0.42
PRNT-201ENST00000326539 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
PRNT-201ENST00000326539 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
PRNT-201ENST00000326539 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
PRNT-201ENST00000326539 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
PRNT-201ENST00000326539 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
PRNT-201ENST00000326539 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
PRNT-201ENST00000326539 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
PRNT-201ENST00000326539 MLECQ14165 292 aa12.37□□□□□ -0.43
PRNT-201ENST00000326539 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
PRNT-201ENST00000326539 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
PRNT-201ENST00000326539 RICTORQ6R327 1708 aa12.36□□□□□ -0.43
PRNT-201ENST00000326539 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
PRNT-201ENST00000326539 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
PRNT-201ENST00000326539 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
PRNT-201ENST00000326539 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
PRNT-201ENST00000326539 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
PRNT-201ENST00000326539 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
PRNT-201ENST00000326539 HSPA1LP34931 641 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 APBB1O00213 710 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 CNPY4Q8N129 248 aa12.34□□□□□ -0.43
PRNT-201ENST00000326539 ZNF526Q8TF50 670 aaPredicted RBP12.34□□□□□ -0.43
PRNT-201ENST00000326539 PLCD4Q9BRC7 762 aa12.33□□□□□ -0.44
PRNT-201ENST00000326539 ATP10BO94823 1461 aa12.33□□□□□ -0.44
PRNT-201ENST00000326539 MFAP1P55081 439 aaKnown RBP12.33□□□□□ -0.44
PRNT-201ENST00000326539 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
PRNT-201ENST00000326539 NCOA1Q15788 1441 aa12.32□□□□□ -0.44
PRNT-201ENST00000326539 TMCO4Q5TGY1 634 aa12.31□□□□□ -0.44
PRNT-201ENST00000326539 E9PSI1 815 aa12.29□□□□□ -0.44
PRNT-201ENST00000326539 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
PRNT-201ENST00000326539 SETQ01105 290 aaPredicted RBP12.29□□□□□ -0.44
PRNT-201ENST00000326539 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
PRNT-201ENST00000326539 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.44
PRNT-201ENST00000326539 ATP10AO60312 1499 aa12.26□□□□□ -0.45
PRNT-201ENST00000326539 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
PRNT-201ENST00000326539 CFAP74Q9C0B2 1584 aa12.25□□□□□ -0.45
PRNT-201ENST00000326539 SAMD9Q5K651 1589 aa12.25□□□□□ -0.45
PRNT-201ENST00000326539 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
PRNT-201ENST00000326539 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
PRNT-201ENST00000326539 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
PRNT-201ENST00000326539 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
PRNT-201ENST00000326539 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
PRNT-201ENST00000326539 TOM1O60784 492 aa12.23□□□□□ -0.45
PRNT-201ENST00000326539 KDM4AO75164 1064 aa12.23□□□□□ -0.45
PRNT-201ENST00000326539 NAP1L2Q9ULW6 460 aaPredicted RBP12.23□□□□□ -0.45
PRNT-201ENST00000326539 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
PRNT-201ENST00000326539 PIP4K2BP78356 416 aa12.22□□□□□ -0.45
PRNT-201ENST00000326539 MAFGO15525 162 aa12.21□□□□□ -0.46
PRNT-201ENST00000326539 PTMSP20962 102 aa12.21□□□□□ -0.46
PRNT-201ENST00000326539 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
PRNT-201ENST00000326539 DEKP35659 375 aaKnown RBP12.2□□□□□ -0.46
PRNT-201ENST00000326539 RGS17Q9UGC6 210 aaPredicted RBP12.2□□□□□ -0.46
PRNT-201ENST00000326539 C3P01024 1663 aa12.19□□□□□ -0.46
PRNT-201ENST00000326539 ANAPC15P60006 121 aa12.19□□□□□ -0.46
PRNT-201ENST00000326539 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
PRNT-201ENST00000326539 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
PRNT-201ENST00000326539 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
PRNT-201ENST00000326539 GLIPR1L2Q4G1C9 344 aa12.17□□□□□ -0.46
PRNT-201ENST00000326539 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
PRNT-201ENST00000326539 GZF1Q9H116 711 aaPredicted RBP12.17□□□□□ -0.46
PRNT-201ENST00000326539 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
PRNT-201ENST00000326539 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
PRNT-201ENST00000326539 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
PRNT-201ENST00000326539 MCCP23508 829 aa12.15□□□□□ -0.46
PRNT-201ENST00000326539 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
PRNT-201ENST00000326539 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
PRNT-201ENST00000326539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
PRNT-201ENST00000326539 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
PRNT-201ENST00000326539 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
PRNT-201ENST00000326539 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
PRNT-201ENST00000326539 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
PRNT-201ENST00000326539 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
PRNT-201ENST00000326539 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
PRNT-201ENST00000326539 CPS1P31327 1500 aa12.12□□□□□ -0.47
PRNT-201ENST00000326539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRNT-201ENST00000326539 TCOF1Q13428 1488 aaKnown RBP12.12□□□□□ -0.47
PRNT-201ENST00000326539 NPATQ14207 1427 aa12.12□□□□□ -0.47
PRNT-201ENST00000326539 PTPRKQ15262 1439 aa12.12□□□□□ -0.47
PRNT-201ENST00000326539 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
PRNT-201ENST00000326539 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
PRNT-201ENST00000326539 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
PRNT-201ENST00000326539 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
PRNT-201ENST00000326539 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms